mRNA_Ecto-sp13_S_contig18458.5752.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18458.5752.1 vs. uniprot
Match: D7FJC5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJC5_ECTSI) HSP 1 Score: 456 bits (1172), Expect = 1.700e-156 Identity = 261/286 (91.26%), Postives = 266/286 (93.01%), Query Frame = 1
Query: 1 HCSYCIMTIVSSGGALFFCAAATLVAAAGAFHAPTGSLNARSITSTRTAPPRPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRSGVSDLNARAGSGGEDEFYTPADLAAYSKPWGITLHYRGTLNTYRIEAHRPNGEVAGYTTGFYLGDLLHLDKVQIQRKESAYEAGAPNAPAPGTRDLPWAEKTGNLFQLGAVLGCAAVRYGWDRGARRVELLAIRENDKQHSRLVRYYRIAGFKAERDVGEDLGSLRDRLTWGAEGTLMVASADDFMRRWTSLMQETNASD 858
HCS IMT VSSG ALFFCA ATLVAA GAFHAPT S NARSI++ TA ST XXXXXXXXXXXXXXXXXXXXXXXX SRRSGVSDLNARA SGGE++FYTPADLAAYSKPWGITLHYRGTLNTYRIEAHRPNGEVAGYTTGFYLGDLLHLDKVQIQRKESAYEAGAPNAPAPGTRDLPWAEKTGNLFQLGAVLGCAAVRYGWDRGARRVELLAIR+NDKQHSRLVRYYRIAGFKAER VGEDLGSLRDRLTWGAEGTLM ASADDFMRRWTSLMQETNASD
Sbjct: 12 HCSCWIMTTVSSGRALFFCAVATLVAATGAFHAPTASFNARSISAMGTA----STAXXXXXXXXXXXXXXXXXXXXXXXX--SRRSGVSDLNARADSGGEEKFYTPADLAAYSKPWGITLHYRGTLNTYRIEAHRPNGEVAGYTTGFYLGDLLHLDKVQIQRKESAYEAGAPNAPAPGTRDLPWAEKTGNLFQLGAVLGCAAVRYGWDRGARRVELLAIRDNDKQHSRLVRYYRIAGFKAERKVGEDLGSLRDRLTWGAEGTLMAASADDFMRRWTSLMQETNASD 291
BLAST of mRNA_Ecto-sp13_S_contig18458.5752.1 vs. uniprot
Match: W7TRS1_9STRA (Acyl-CoA N-acyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRS1_9STRA) HSP 1 Score: 101 bits (252), Expect = 6.610e-21 Identity = 61/187 (32.62%), Postives = 96/187 (51.34%), Query Frame = 1
Query: 295 GEDEFYTPADLAAYSKPWGITLHYRGTLNTYRIEAHRPNG----EVAGYTTGFYLG--DLLHLDKVQIQRKESAYEAGAPNAPAPGTRDLPWAEKTGNLFQLGAVLGCAAVRYGWDRGARRVELLAIRENDKQHSRLVRYYRIAGFKAERDVGEDLGSLRDRLTWGAEGTLMVASADDFMRRWTSLM 837
G++ T A++ A + +GI L YRI A N E GYT+GF L+HLD +Q++R+ G+ P + G +LG AA+RY +D+G + ELLAI +++K H L+ +YR AGF + ++V DL + D L WG GT M ++++RRW +++
Sbjct: 57 GKEPLVTQAEIEACAAAFGIQLRLSTLGPFYRIIARLTNDKEGVEPIGYTSGFVAPFFKLVHLDTMQVRRRYWKQLDGSNRFP----------------YGCGLLLGAAAMRYAYDKGCSKAELLAINDDEKSHRLLLGFYRTAGFVSVKEVTNDLRCVPDLLVWGGVGTRMDMPVEEYLRRWRTVI 227
BLAST of mRNA_Ecto-sp13_S_contig18458.5752.1 vs. uniprot
Match: A0A1Z5KB50_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KB50_FISSO) HSP 1 Score: 100 bits (250), Expect = 8.290e-21 Identity = 63/178 (35.39%), Postives = 94/178 (52.81%), Query Frame = 1
Query: 325 LAAYSKPWGITLHYRGTLNTYRIEAHRPNG--EVAGYTTGFYL-GDLLHLDKVQIQRKESAYEAGAPNAPAPGTRDLPWAEKTGNLFQLGAVLGCAAVRYGWDRGARRVELLAIRENDKQHSRLVRYYRIAGFKAERDVGEDLGSLRDRLTWGAEGTLMVASADDFMRRWTSLMQETN 849
L Y++ GI L + YR A + +V GY G LLHLDK+++ R A A N G G +G ++G + +G + G ++ E LAI + +KQH RLVRYYR AGF+ + VG+D+ + DRL WG GTL+ A+ D+ ++ WT LMQ+++
Sbjct: 49 LEDYAQRQGIVLTFTTLGPAYRCIARSQHNTTQVLGYVEGILRPSPLLHLDKMEVFRP-MVQRARAENPAFTGG---------GVSLGVGLLMGYLCLLHGQENGCKKAEFLAIDDEEKQHKRLVRYYRHAGFQFIKYVGDDIWDVPDRLVWGGCGTLLGANIDELLQFWTRLMQKSD 216
BLAST of mRNA_Ecto-sp13_S_contig18458.5752.1 vs. uniprot
Match: L1J4V3_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J4V3_GUITC) HSP 1 Score: 99.8 bits (247), Expect = 4.100e-20 Identity = 58/179 (32.40%), Postives = 97/179 (54.19%), Query Frame = 1
Query: 322 DLAAYSKPWGITLHYRGTLNTYRIEAHRP--------NGEVAGYTTGFYLGDLLHLDKVQIQRKESAYEAGAPNAPAP----GTRDLPWAEKTGNLFQLGAVLGCAAVRYGWDRGARRVELLAIRENDKQHSRLVRYYRIAGFKAERDVGEDLGSLRDRLTWGAEGTLMVASADDFMRR 822
+ AA + + T+ G L YR+ + G+ GYT G +G+L+ D +++ S G PN+ + W ++ +++ L +LG A RY +++G RR ELLAI++N++QH L R+YR GF+A +DV +D+ + DR+ WG GTLM AS ++ +R+
Sbjct: 67 EQAAAASGFSFTVTQLGPL--YRVMIRKTPKDGEEEGKGQAIGYTAGTIVGNLMRQDTMRL----STVNTGNPNSMTDRKKVSVNERGW--RSNSVYGLSLLLGAYAGRYAYEQGCRRAELLAIKDNERQHKILERHYRRLGFRAVKDVTDDITCVGDRMIWGGIGTLMEASVEEMLRK 237
BLAST of mRNA_Ecto-sp13_S_contig18458.5752.1 vs. uniprot
Match: A0A7S3LDP4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LDP4_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.370e-19 Identity = 62/186 (33.33%), Postives = 95/186 (51.08%), Query Frame = 1
Query: 310 YTPADLAAYSKPWGITLHYRGTLNTYRIEAHRPNGE--VAGYTTGFY--LGDLLHLDKVQIQRKESAYEAGAPNAPAPGTRDLPWAEKTGNLFQ-LGAVLGCAAVRYGWDRGARRVELLAIRENDKQHSRLVRYYRIAGFKAERDVGEDLGSLRDRLTWGAEGTLMVASADDFMRRWTSLMQETNA 852
+T L Y+ G+ L YR A + + + GY GF G+LLH+DK+++ RK ++ A N P K G F +G ++G + +G ++G + E LAI + D+QH RLVRYY+ AGF + VG+DL + DR+ WG GTL+ + WT LM+++ A
Sbjct: 70 WTREHLEDYASEQGVVLSLTTLGPAYRAIARPKHNQTLILGYVEGFVRPTGNLLHVDKMEVFRK-IVKQSRAEN---------PQEFKGGGTFLGVGLLMGFLCMLHGQEKGCKEAEFLAIDDEDRQHKRLVRYYKTAGFDFIKYVGDDLKDIPDRMVWGGCGTLLRKDISYLLSYWTQLMEKSVA 245
BLAST of mRNA_Ecto-sp13_S_contig18458.5752.1 vs. uniprot
Match: A0A068TMQ6_COFCA (Uncharacterized protein n=1 Tax=Coffea canephora TaxID=49390 RepID=A0A068TMQ6_COFCA) HSP 1 Score: 94.4 bits (233), Expect = 4.750e-19 Identity = 56/175 (32.00%), Postives = 84/175 (48.00%), Query Frame = 1
Query: 319 ADLAAYSKPWGITLHYRGTLNTYRIEAHRPN-----GEVAGYTTGFYLGDLLHLDKVQIQRKESAYEAGAPNAPAPGTRDLPWAEKTGNLFQLGAVLGCAAVRYGWDRGARRVELLAIRENDKQHSRLVRYYRIAGFKAERDV-GEDLGSLRDRLTWGAEGTLMVASADDFMRRW 825
AD+ SK + LH + +RI A G G + G +LHLD ++++RK E ++F +G +G A+RYG+D G ++ ELLAI + D HS+LVR+Y+ GF++ +V G G L D L WG GT M A ++ M +W
Sbjct: 2 ADIIEASKRQNLDLHIQSLGPFFRITAKSLKTGNELGRAEGLVRLWLGGKILHLDSIKLRRKTLEMEK--------------------SIFGIGLYVGAVAIRYGYDCGCKKAELLAINDTDLYHSKLVRFYKRIGFRSAYEVTGSSFGDLADMLVWGGIGTRMDADIEELMIKW 156
BLAST of mRNA_Ecto-sp13_S_contig18458.5752.1 vs. uniprot
Match: A0A2R6Q5V8_ACTCC (Polycomb group protein like n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6Q5V8_ACTCC) HSP 1 Score: 94.7 bits (234), Expect = 1.350e-18 Identity = 58/189 (30.69%), Postives = 89/189 (47.09%), Query Frame = 1
Query: 301 DEFYTPADLAAYSKPWGITLHYRGTLNTYRI-----EAHRPNGEVAGYTTGFYLGDLLHLDKVQIQRKESAYEAGAPNAPAPGTRDLPWAEKTGNLFQLGAVLGCAAVRYGWDRGARRVELLAIRENDKQHSRLVRYYRIAGFKAERDV-GEDLGSLRDRLTWGAEGTLMVASADDFMRRWTSLMQETN 849
+EF T +D+ SK I L + +RI E R G G + G +LHLD ++++R+ E ++F +G +G A+RYG++ G + ELLAI ++D HS+LVR+Y GFKA +V G + L L WG GT M A+ D + +W + + N
Sbjct: 55 NEFPTMSDITEASKSQKIDLRLQSLGPFFRITAKSLETERELGRAEGVIRVWLGGKILHLDSIKLRRETLGMER--------------------SIFGIGLFIGAVAIRYGYECGCGKAELLAINDSDLYHSKLVRFYNRIGFKAVHEVTGSSMADLAHMLVWGGVGTRMDATISDLLVKWCARFKPRN 223
BLAST of mRNA_Ecto-sp13_S_contig18458.5752.1 vs. uniprot
Match: A0A218X2I3_PUNGR (uncharacterized protein LOC116194462 n=3 Tax=Punica granatum TaxID=22663 RepID=A0A218X2I3_PUNGR) HSP 1 Score: 93.6 bits (231), Expect = 2.640e-18 Identity = 60/187 (32.09%), Postives = 88/187 (47.06%), Query Frame = 1
Query: 289 SGGEDEFYTPADLAAYSKPWGITLHYRGTLNTYRIEAH-----RPNGEVAGYTTGFYLGDLLHLDKVQIQRKESAYEAGAPNAPAPGTRDLPWAEKTGNLFQLGAVLGCAAVRYGWDRGARRVELLAIRENDKQHSRLVRYYRIAGFKAERDV-GEDLGSLRDRLTWGAEGTLMVASADDFMRRWTS 831
+GG T D+ A S+ + L +RI A R G G + G +LHLD ++++R+ E ++F +G +G A+RYG+D G R+ ELLAI ++D HS+LVR+Y GFKA +V G +G L L WG GT M A D+ + +W S
Sbjct: 39 NGGSISVPTMDDILAASRAQKLDLQLSKLGPFFRITARGSETGRELGRFEGMIRVWAGGRILHLDSIRLRRETLGMEK--------------------SIFGIGVFIGAVAIRYGFDCGCRKAELLAINDSDLYHSKLVRFYTRLGFKAVHEVTGSTMGDLAHMLVWGGVGTRMDADIDELLVKWCS 205
BLAST of mRNA_Ecto-sp13_S_contig18458.5752.1 vs. uniprot
Match: UPI0010A47D4F (uncharacterized protein LOC114725382 isoform X1 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A47D4F) HSP 1 Score: 92.4 bits (228), Expect = 6.740e-18 Identity = 57/177 (32.20%), Postives = 86/177 (48.59%), Query Frame = 1
Query: 319 ADLAAYSKPWGITLHYRGTLNTYRI-----EAHRPNGEVAGYTTGFYLGDLLHLDKVQIQRKESAYEAGAPNAPAPGTRDLPWAEKTGNLFQLGAVLGCAAVRYGWDRGARRVELLAIRENDKQHSRLVRYYRIAGFKAERDV-GEDLGSLRDRLTWGAEGTLMVASADDFMRRWTS 831
+D+ S+ + L R +RI E+ G G + G +LHLD +++QR+ E ++F +G +G A+RYG+D G ++ ELLAI ++D HS+LVR+Y GFKA +V G +G L L WG GT M A+ +D M +W S
Sbjct: 49 SDILEASRAQKLDLQLRTVGPFFRITAKSLESQNEVGRAEGIIRVWLGGRILHLDSMKLQRETIGMEK--------------------SIFGIGLFIGALAIRYGYDCGCKKAELLAINDSDLYHSKLVRFYSRIGFKAVHEVSGSSVGDLGHMLMWGGIGTRMDANIEDLMIKWCS 205
BLAST of mRNA_Ecto-sp13_S_contig18458.5752.1 vs. uniprot
Match: K0TEB6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEB6_THAOC) HSP 1 Score: 90.9 bits (224), Expect = 4.470e-17 Identity = 63/205 (30.73%), Postives = 97/205 (47.32%), Query Frame = 1
Query: 250 RRSGVSDLNARAGSGGEDEFYTPADLAAYSKPWGITLHYRGTLNTYR------IEAHRPNGEVAGYTTGFY--LGDLLHLDKVQIQRKESAYEAGAPNAPAPGTRDLPWAEKTGNLFQLGAVLGCAAVRYGWDRGARRVELLAIRENDKQHSRLVRYYRIAGFKAERDVGEDLGSLRDRLTWGAEGTLMVASADDFMRRWTSLMQ 840
R + S L+A + + ++ A++ G+ L + T N R + P + GY GF G +LH DK++I ++A A G G G ++ + +G + G ++E LAI + + QH RLVRYYR AGFK R VGE+L + DRL WG GTLM + D +R+WT +++
Sbjct: 38 RGASGSSLHAASTDAPTSDIAEIEEVTAFASANGVDLQF--TTNPARGYRGVAVAVDDPEN-ILGYVEGFIRPAGQILHADKMEI------FKAALNTARTSGGSF----SGGGTFLGPGLLVAYVCLLHGRECGCGKIEFLAIDDAEFQHKRLVRYYRTAGFKEVRYVGEELKDIGDRLVWGGCGTLMTENVDKVLRKWTRIIR 229 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18458.5752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18458.5752.1 >prot_Ecto-sp13_S_contig18458.5752.1 ID=prot_Ecto-sp13_S_contig18458.5752.1|Name=mRNA_Ecto-sp13_S_contig18458.5752.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=290bp MTIVSSGGALFFCAAATLVAAAGAFHAPTGSLNARSITSTRTAPPRPSTAback to top mRNA from alignment at Ecto-sp13_S_contig18458:251..2699- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18458.5752.1 ID=mRNA_Ecto-sp13_S_contig18458.5752.1|Name=mRNA_Ecto-sp13_S_contig18458.5752.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2449bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18458:251..2699- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18458:251..2699- >mRNA_Ecto-sp13_S_contig18458.5752.1 ID=mRNA_Ecto-sp13_S_contig18458.5752.1|Name=mRNA_Ecto-sp13_S_contig18458.5752.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=870bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18458:251..2699- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |