prot_Ecto-sp13_S_contig18457.5751.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18457.5751.1
Unique Nameprot_Ecto-sp13_S_contig18457.5751.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length257
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18457.5751.1 vs. uniprot
Match: D7FVJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ6_ECTSI)

HSP 1 Score: 406 bits (1044), Expect = 5.440e-140
Identity = 222/249 (89.16%), Postives = 233/249 (93.57%), Query Frame = 0 
Query:    1 FIVGGVLTAELVVFFVASRITAVINQATSIEIGRPGSPSSRAFYFKAKRNLWIQAAALCGVGCFPMLVIAIKRLTMAGRSTPIILETLQILTGHGGAITFSSATSFDRASGKKRNSAVDTSGVPWSRRISAAQMGVVSARASEAAPSAMIARIKSMNPKTKGKAESTELVQAEEQGEMSKGSRRSGSIGEDAIEVVPFVQRSSGSFGVDCIRHLPHPKAARVIPICVPLTAISISSDETSTSSITAGRN 249
            FIVGGVLTAELVVFFVASRITAVINQATS  +GRPGSPSSRAFYFKAKRN+WIQAAALCGVGCFPMLVIAIKRLTMAGRSTPII+ETLQILTGHGGAI FSSATSFDRASG +RNSAVDTS VPW RRIS A+MGVVSA ASEAAPSAMIARIKSM+PK KGKA++TELVQAEEQGE+SKGSR S SIGEDAIEVVPFVQRSSGSFG  CI H PHPKAARVIPI VPLTAIS+SSDETSTSS+TAGRN
Sbjct:  118 FIVGGVLTAELVVFFVASRITAVINQATSTAMGRPGSPSSRAFYFKAKRNMWIQAAALCGVGCFPMLVIAIKRLTMAGRSTPIIIETLQILTGHGGAIMFSSATSFDRASGMRRNSAVDTSRVPWRRRISVARMGVVSAVASEAAPSAMIARIKSMDPKKKGKAKTTELVQAEEQGEISKGSRMSCSIGEDAIEVVPFVQRSSGSFGAVCIHHPPHPKAARVIPISVPLTAISVSSDETSTSSMTAGRN 366
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BLAST of mRNA_Ecto-sp13_S_contig18457.5751.1 vs. uniprot
Match: A0A6H5KTI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI4_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 1.110e-72
Identity = 129/150 (86.00%), Postives = 137/150 (91.33%), Query Frame = 0 
Query:  100 FSSATSFDRASGKKRNSAVDTSGVPWSRRISAAQMGVVSARASEAAPSAMIARIKSMNPKTKGKAESTELVQAEEQGEMSKGSRRSGSIGEDAIEVVPFVQRSSGSFGVDCIRHLPHPKAARVIPICVPLTAISISSDETSTSSITAGRN 249
            FS+ATSFDR SG KRNSAVDTSGVPWSRRISAAQMGVVSA ASEAAPSAMIARIK MNPK KGKAE+TELVQ EE+GE SK S RSGSIGEDAIEVV FVQRSSGSFG DCIRH PHP+AARV+PI VPLTA+S+SSDETSTSS+TAGRN
Sbjct:    2 FSAATSFDRGSGTKRNSAVDTSGVPWSRRISAAQMGVVSAIASEAAPSAMIARIKRMNPK-KGKAETTELVQTEEKGETSKDSCRSGSIGEDAIEVVTFVQRSSGSFGADCIRHPPHPRAARVLPISVPLTAVSVSSDETSTSSMTAGRN 150
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BLAST of mRNA_Ecto-sp13_S_contig18457.5751.1 vs. uniprot
Match: A0A6H5KVX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX1_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 5.830e-23
Identity = 57/90 (63.33%), Postives = 60/90 (66.67%), Query Frame = 0 
Query:    1 FIVGGVLTAELVVFFVASRITAVINQATSIEIGRPGSPSSRAFYFKAKRNLWIQAAALCGVGCFPMLVIAIKRLTMAGRSTPIILETLQI 90
            F+VGG+LTA                          GSPSSR FY KAKRNLWIQAAAL GVGCFPMLVIAIK LTMAGRSTPIILETLQ+
Sbjct:  102 FVVGGILTA--------------------------GSPSSRTFYSKAKRNLWIQAAALSGVGCFPMLVIAIKLLTMAGRSTPIILETLQV 165
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18457.5751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVJ6_ECTSI5.440e-14089.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTI4_9PHAE1.110e-7286.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVX1_9PHAE5.830e-2363.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..256
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..71
NoneNo IPR availableTMHMMTMhelixcoord: 52..71
NoneNo IPR availableTMHMMTMhelixcoord: 2..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18457contigEcto-sp13_S_contig18457:1880..3484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18457.5751.1mRNA_Ecto-sp13_S_contig18457.5751.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18457 1880..3484 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18457.5751.1 ID=prot_Ecto-sp13_S_contig18457.5751.1|Name=mRNA_Ecto-sp13_S_contig18457.5751.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=257bp
FIVGGVLTAELVVFFVASRITAVINQATSIEIGRPGSPSSRAFYFKAKRN
LWIQAAALCGVGCFPMLVIAIKRLTMAGRSTPIILETLQILTGHGGAITF
SSATSFDRASGKKRNSAVDTSGVPWSRRISAAQMGVVSARASEAAPSAMI
ARIKSMNPKTKGKAESTELVQAEEQGEMSKGSRRSGSIGEDAIEVVPFVQ
RSSGSFGVDCIRHLPHPKAARVIPICVPLTAISISSDETSTSSITAGRNK
AAESIV*
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