prot_Ecto-sp13_S_contig18448.5749.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18448.5749.1
Unique Nameprot_Ecto-sp13_S_contig18448.5749.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length133
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18448.5749.1 vs. uniprot
Match: D8LB36_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB36_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.890e-10
Identity = 35/40 (87.50%), Postives = 36/40 (90.00%), Query Frame = 0 
Query:    6 MSPLTFAAEKGSSSVVKILLKHGANVSIKENCGSTALHLS 45
            MSPL FAAEKGS SVVKILLK+GANVSIKEN G TALHLS
Sbjct:    1 MSPLMFAAEKGSCSVVKILLKYGANVSIKENGGFTALHLS 40
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18448.5749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB36_ECTSI1.890e-1087.50EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 86..100
score: 33.32
coord: 38..53
score: 34.83
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 4..33
e-value: 4.1E-5
score: 33.0
coord: 70..99
e-value: 0.0015
score: 27.8
coord: 103..132
e-value: 0.15
score: 21.2
coord: 37..66
e-value: 0.014
score: 24.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 4..36
score: 13.704
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 37..69
score: 11.407
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 70..102
score: 10.927
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 103..132
score: 9.778
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 4..66
e-value: 5.4E-10
score: 39.7
coord: 70..130
e-value: 1.2E-8
score: 35.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 4..132
score: 41.327
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 77..132
e-value: 7.6E-14
score: 53.7
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..76
e-value: 5.6E-25
score: 89.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 4..130
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 39..130
coord: 5..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18448contigEcto-sp13_S_contig18448:2775..3173 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18448.5749.1mRNA_Ecto-sp13_S_contig18448.5749.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18448 2621..3197 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18448.5749.1 ID=prot_Ecto-sp13_S_contig18448.5749.1|Name=mRNA_Ecto-sp13_S_contig18448.5749.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=133bp
MCLDGMSPLTFAAEKGSSSVVKILLKHGANVSIKENCGSTALHLSSQHGH
PTVTRLLASAGASLEAVNKRHCTPLHLAAQRGQWKAMVTLIEAGANVNSR
MLDGATPLLIASTQGYKDAIKELLRAKADPQF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf