prot_Ecto-sp13_S_contig18447.5748.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18447.5748.1
Unique Nameprot_Ecto-sp13_S_contig18447.5748.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length161
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18447.5748.1 vs. uniprot
Match: D8LH18_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH18_ECTSI)

HSP 1 Score: 290 bits (743), Expect = 5.900e-98
Identity = 150/161 (93.17%), Postives = 150/161 (93.17%), Query Frame = 0 
Query:    1 GTSPSALTPTPHRTRALESMSEHRGVLKRRRLLLCAETGGRGQEPVEPVAVLRTAVETRKVPMAEVSEALRVLAEDGGSPLACGAEDVEGSWELVFSTQLKSGYMPIRELVGFYPSREEASIDATAGPLPIGGMRGKCWWRGGEENELAFMLGAVKLGPFK 161
            GTSPSALTP PHRTRALESMSEHRGV KRRRLL  AE G  GQE VEP AVLRTAVETRKVPM EVSEALRVLA DGGSPLACGAEDVEGSWELVFSTQLKSGYMPIRELVGFYPSREEASIDATAGPLPIGGMRGKCWWRGGEENELAFMLGAVKLGPFK
Sbjct:   27 GTSPSALTPAPHRTRALESMSEHRGVPKRRRLLY-AEGGXXGQESVEPAAVLRTAVETRKVPMTEVSEALRVLAADGGSPLACGAEDVEGSWELVFSTQLKSGYMPIRELVGFYPSREEASIDATAGPLPIGGMRGKCWWRGGEENELAFMLGAVKLGPFK 186
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BLAST of mRNA_Ecto-sp13_S_contig18447.5748.1 vs. uniprot
Match: A0A836CJ46_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ46_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 4.760e-16
Identity = 47/116 (40.52%), Postives = 72/116 (62.07%), Query Frame = 0 
Query:   49 VAVLRTAVETRKVPMAEVSEALRVLAEDGGSPLACGAEDVEG-SWELVFSTQLKSGYMPIRELVGFYPSREEASIDATAGP-LPIGGMRGKCWWR---GGEENELAFMLGAVKLGP 159
            VA++  +V+TR++P   V +AL  L +      A   +DV+G +WELVFS+QL  GYMP+RE++ F  S  + S+  T GP +P+GG++G C W+   G +   ++F L  V LGP
Sbjct:   49 VALVLESVDTRQIPAENVVQALESLEQKAQ---AVRQQDVDGLNWELVFSSQLSKGYMPVREVICFDISNGKISLSTTFGPGIPLGGIQGTCSWQEPEGSQPGVVSFNLSKVLLGP 161
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18447.5748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LH18_ECTSI5.900e-9893.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CJ46_9STRA4.760e-1640.52Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18447contigEcto-sp13_S_contig18447:1868..3485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18447.5748.1mRNA_Ecto-sp13_S_contig18447.5748.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18447 1868..3485 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18447.5748.1 ID=prot_Ecto-sp13_S_contig18447.5748.1|Name=mRNA_Ecto-sp13_S_contig18447.5748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=161bp
GTSPSALTPTPHRTRALESMSEHRGVLKRRRLLLCAETGGRGQEPVEPVA
VLRTAVETRKVPMAEVSEALRVLAEDGGSPLACGAEDVEGSWELVFSTQL
KSGYMPIRELVGFYPSREEASIDATAGPLPIGGMRGKCWWRGGEENELAF
MLGAVKLGPFK
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