mRNA_Ecto-sp13_S_contig1844.5744.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1844.5744.1 vs. uniprot
Match: D7FNY4_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI) HSP 1 Score: 1639 bits (4243), Expect = 0.000e+0 Identity = 858/1041 (82.42%), Postives = 882/1041 (84.73%), Query Frame = 2
Query: 2384 LRESGRQIRFRAEVANTINLTRLLNSGCRMLHFAGQGNDKYLAFESGRDWKCGIMEPLEVASLKNLFQAGGVRTELVFISSCSSEMSGRACVEAGVPHVVAVKHKANVTDEEARHFSTVFYDALFENGGRYTVKQAFDIALNFVNATHSSAHSKHAGGHFLLLPKGKKKCGNHDVRVFETLPEGQLEDETHPPTSRPPCKKAVPSYKGLVGLQHVVRLLLSPRAACVTITGEPGSGKTERAIQACDYVRERHHFDYFLWADCDKAALNSCSDKFSGNPFFVLPNCLNDSAWEDPCRLIGLAIGMPQPGPNSVQELHQFIFKNPNTNSGQPFQKVLLVLDNVDSLLERDGDAQDRLVQVLCNLCSMGDGGHLKLLATSEHKLLSGNEYFRGSTEMVARVEPLETRHASELLMDNLPRNLELRELGLQSGGLSLSDVLSAVQNHPVLKEVLEIAEGHPGTLVRLAPVLLDGSLDDACRLKEMTTRR-------------------------------------RRCRADFRDKSYRRRSYGRSNSNRTAVSSKGELSVTMSLSSSTGAPRSPMILSPMGPAFGDTHVQRNRGDTRFLQRDSSSXXXXXXXXRAGMTSPVRPVPNETLREGPARAHSSSLPAMCRDPEWHGPPQPPPHSLLHQQLQEHRRVLAQEAPDDEPESPQMDLKEQRARDLARAAGVVDRGCRLVWVTATSRMAGGCRQDDGGGSGGEWSSRRGKFVSWECLQESLMEHLREGTKTTRNWGDSIISPHGRVVDTPQLEFIRGILRRGQEAVTKARWGATGDECTEVGGDGRYDFISVEAFAKFSQWWAPLMATLGIIRSDWARTRPVRVHGFMSRVASKRLLMQRECGTFLLRFSESKMGALVISFTQPSVSSGRSSLSVKHSLVEVKRGGRCCIQAEKGGMRCYASLHDFVRRIPELKKLYPDIPKEEAFGETPRSPPATASAPGAAQRDELVAEIESLVKERMSALEGNRKRACPRTAKKGGIFQSELTADTHEKPAAATTSPRDASEHPTPHTRGK 5395
LRESGRQIRFRAEVAN INL+RLL SGCRMLHFAGQGNDKYLAFESGRDW CGIMEPLEVASL NLFQAGGVRTELVFISSCSSEMSGRACVEAGVPHVVAVKHKANVT GNHDVR+FETLPEGQL DETHPPT RPPCKKAVPSYKGL GLQ VVRLLL RAACVTITGEPGSGKTERAIQACDYVRERH FD FLWADCDKAALNSCSDK SGNPFF LP CL DSAWEDPCRLIGLAIGMPQPGP S QELHQFIF NPNT+SGQPFQKVLLVLDNVDSLLERDGDAQDRLVQ+LCNLCS+GDGGHLKLLATSEHKLLSG+E FRG TE VARVEPLETRHASELLMDNLPRNLEL ELGL+SGGLSL+DVL+AVQNHPVLKEVLEIAEGHPGTLVRLAPVLLDGSLDDACRLKEMTTRR CRADFRDKSYRRR YGR NSNRTAVSSKGELSVTM+LSSSTGAPRSPMILSPMGPAFGDTH QRNRGDTRFLQRDSSSXXXXXXXXRAGMTSPVRPVPNET+REGPARAHSSS PA CR+PEWHGPPQPPPHSLLHQQLQ+HRRVLAQEAPDDEPESPQMD++EQR RDLARAAGVVDRGCRLVWVTATSRMAGGCRQDD WSSRRGK VSWECLQESLMEHLREGTKTTRNW D IISPHGRV DTPQLEFIRGILRRGQEAV +ARWGATGDEC EV G RYDFISVEAFAKFSQWWAPL++TLGIIR+DWARTRPVRVHGFMSR+A+KRLLMQRECGTFLLRFSESKMGALVISFTQPSVS GR SLSVKHSLVEVK GGRCCIQAEKGGMRCYASLHDFVRRIPELKKLYPDIPKEEAFGETPRSPPATAS PGAA+RDELVAE ESL+K RMSALEGNR+ ACPRTAK GGI Q ELTAD HEKPAA TTSPRD SEHPTPHT GK
Sbjct: 2 LRESGRQIRFRAEVANIINLSRLLKSGCRMLHFAGQGNDKYLAFESGRDWNCGIMEPLEVASLSNLFQAGGVRTELVFISSCSSEMSGRACVEAGVPHVVAVKHKANVTG------------------------------------------------------------GNHDVRIFETLPEGQLVDETHPPTPRPPCKKAVPSYKGLAGLQQVVRLLLDERAACVTITGEPGSGKTERAIQACDYVRERHRFDCFLWADCDKAALNSCSDK-SGNPFFALPTCLKDSAWEDPCRLIGLAIGMPQPGPTSEQELHQFIFNNPNTDSGQPFQKVLLVLDNVDSLLERDGDAQDRLVQLLCNLCSIGDGGHLKLLATSEHKLLSGHERFRGGTETVARVEPLETRHASELLMDNLPRNLELTELGLESGGLSLADVLTAVQNHPVLKEVLEIAEGHPGTLVRLAPVLLDGSLDDACRLKEMTTRRVVVAARVMVWRLFEWLLLLGATKVAYNWDLATIGSLSEECRADFRDKSYRRRRYGRPNSNRTAVSSKGELSVTMTLSSSTGAPRSPMILSPMGPAFGDTHDQRNRGDTRFLQRDSSSXXXXXXXXRAGMTSPVRPVPNETVREGPARAHSSSPPARCRNPEWHGPPQPPPHSLLHQQLQDHRRVLAQEAPDDEPESPQMDMEEQRTRDLARAAGVVDRGCRLVWVTATSRMAGGCRQDDXXXXXXXWSSRRGKLVSWECLQESLMEHLREGTKTTRNWDDPIISPHGRVADTPQLEFIRGILRRGQEAVARARWGATGDECPEVDGGCRYDFISVEAFAKFSQWWAPLISTLGIIRNDWARTRPVRVHGFMSRLAAKRLLMQRECGTFLLRFSESKMGALVISFTQPSVSPGRRSLSVKHSLVEVKWGGRCCIQAEKGGMRCYASLHDFVRRIPELKKLYPDIPKEEAFGETPRSPPATASGPGAARRDELVAETESLIKGRMSALEGNRRLACPRTAK-GGIIQRELTADIHEKPAAGTTSPRDPSEHPTPHTPGK 980
BLAST of mRNA_Ecto-sp13_S_contig1844.5744.1 vs. uniprot
Match: D7FNY6_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY6_ECTSI) HSP 1 Score: 940 bits (2429), Expect = 5.260e-311 Identity = 584/1070 (54.58%), Postives = 685/1070 (64.02%), Query Frame = 2
Query: 2294 APVTR-RHQLNFFELATNLPTQQELELIRNKLRESGRQIRFRAEVANTINLTRLLNSGCRMLHFAGQGNDKYLAFESGRDWKCGIMEPLEVASLKNLFQAGG-VRTELVFISSCSSEMSGRACVEAGVPHVVAVKHKANVTDEEARHFSTVFYDALFENGGRYTVKQAFDIALNFVNATHSSAHSKHAGGHFLLLPKGKKKCGNHDVRVFETLPEGQLEDETHPPTSRPPCKKAVPSYKGLVGLQHVVRLLLSPRAACVTITGEPGSGKTERAIQACDYVRERHHFDYFLWADCDKAALNSCSDKF--SGNPFFVLPNCLNDSAW-----EDPCRLIGLAIGMPQPGPNSVQELHQFIFKNPNTNSGQPFQKVLLVLDNVDSLLERDGDAQDRLVQVLCNLCSMGDGGHLKLLATSEHKLLSGNEYFRGSTEMVARVEPLETRHASELLMDNLPRNLELRELGLQSGGLSLSDVLSAVQNHPVLKEVLEIAEGHPGTLVRLAPVLLDGSLDDACRLKEMTTRRRRCRADFRDKSYRRRSYGRSNSNRTAVSSKGELSVTMSLS---SSTG-------------APRSPMILSPMGPAFG-DTHVQRNRGDTRFLQRDSSSXXXXXXXXRAGMTSPVRPVPNETLREGPA-RAHSSSLPAMCRDPEWHGPPQ-----------PPPHSLLHQQLQE--------HRR-VLAQEAPDDEPESPQMDLKEQRARDLARAAGVVDRGCRLVWVTATSRMAGGCRQDDGGGSGGEW-SSRRGKFVSWECLQESLMEHLR------------------EGTKTT---------------------------------RNWGDSIISP--HG-RVVDTPQLEFIRGILRRGQEAVTKARWGATGDECTEVGGDGRYDFISVEAFAKFSQWWAPLMATLGIIRSDWARTRPVRVHGFMSRVASKRLLMQRECGTFLLRFSESKMGALVISFTQPSVSSGRSSLSVKHSLVEVKRGGRCCIQA-EKGGMRCYASLHDFVRRIPELKKLYPDIPKEEAF-GETPRSPPATASAPGAAQRD 5191
AP+ R H N F L T +ELE +RNKLR GRQI+FRAEVAN +NLTRLL+SGC +LH+AG GND+YLAFES +WKCGIMEPL+V LKNLF+ G V+T+LVFISSCSSE SG V AGVPHVVAVKH A VTD AR F+ VFY+ALFENGGR TVKQAFD+ALN VNATH A KH FLLLP+ GNHDVR+F+TLPEG+L DETH RPPCKKAV SY G +QHVVRLLL RAACVT+TG+PGSGKTE AIQACDYVR RHHF+ FLWADCDKAAL++ S + F+VLPN N ++ ED CR IG+AIG+PQPGP++ ELHQFIF PNT+SGQP QKVLLVLDNVDSLLER GDAQDRLV +L +LCSMG GGHLKLLATSE+KLLSGNE F G TE VA VEPLETRHASELL+DN PR+L+ ELGLQSGGLS + V+SA QNHPVLKEVLEIA GHPGTLVRLAPVLL+G LDDAC+LKEM T CRADFRDKSYRRR + RS S +A SS + +S SS G AP +P MG AF D R+R + +SS XXXXX P P+E G RAH S CR+P HG PQ PP L HQ QE HRR ++A+EA +++PE PQM++++Q A D+A AAGV +RGCRL+WVTATS MA R+D+G +S+RG+FVSW L+E L +L EGT+ T R G+ + P H RV+D Q FIRGILR+ Q+ + A G +CTE DGRYDFISVE FAKFS+WW PLM TLGIIR+DWARTRPV VHGF+ R+ + L +R G FLLRFSES G LVIS + HSLVEV GGRC + ++G R Y SLHD V + +L+ LY DIP E+ F G P +P A+R+
Sbjct: 28 APLVRFDHNRNMFRELKALRTCEELEFVRNKLRGFGRQIKFRAEVANAMNLTRLLHSGCLLLHYAGHGNDEYLAFESTTEWKCGIMEPLKVKYLKNLFRVDGIVKTQLVFISSCSSEASGNVFVAAGVPHVVAVKHNAGVTDGAAREFANVFYNALFENGGRSTVKQAFDMALNCVNATHLGA-PKHEEDLFLLLPRD----GNHDVRIFDTLPEGKLVDETHRLPPRPPCKKAVSSYMGPARVQHVVRLLLDERAACVTVTGDPGSGKTELAIQACDYVRYRHHFNSFLWADCDKAALDASPYNLVSSADRFYVLPNSPNGASGDSVSSEDLCRQIGVAIGIPQPGPSTTNELHQFIF--PNTDSGQPSQKVLLVLDNVDSLLERGGDAQDRLVHLLGDLCSMGGGGHLKLLATSEYKLLSGNEVFHGGTERVAEVEPLETRHASELLIDNSPRDLQPEELGLQSGGLSKAHVVSAAQNHPVLKEVLEIAGGHPGTLVRLAPVLLNGPLDDACKLKEMATS---CRADFRDKSYRRRGHRRSGSGTSAGSSSSLAMIAREMSEAGSSLGTSAPTSRSQCGSPAPATPSQRPAMGNAFSEDAGHGRDRKRVSLNRTNSSIDGSXXXXXXXXXXXXXPPYPDEEDGGGGLPRAHGSGPTGRCRNPRCHGRPQQQPSLGQQSGSPPGCCLRHQFAQELRDRVAMMHRRQMMAREALEEQPELPQMNMEQQHAWDMAEAAGV-ERGCRLLWVTATSNMANDWRRDNGXXXXXXXXASKRGEFVSWNHLREGLQRNLDVRMTVPCSSSGGDRHDALEGTQYTYLDDGQEVDSEEVXXXXXXXXXXXXXERAAGGERRTGNRRMGPLPHATRVLDRSQWGFIRGILRKKQKELANA--GVQTVDCTEYRLDGRYDFISVETFAKFSRWWVPLMGTLGIIRNDWARTRPVFVHGFIGRLETDENL-RRARGAFLLRFSESHPGKLVIS------------RAYHHSLVEVTEGGRCYMTVNQQGTRREYESLHDLVTQNGQLRHLYQDIPMEQVFTGRAPAAPETETEGAPEARRE 1071
BLAST of mRNA_Ecto-sp13_S_contig1844.5744.1 vs. uniprot
Match: A0A6H5KC67_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC67_9PHAE) HSP 1 Score: 816 bits (2109), Expect = 1.510e-264 Identity = 533/1047 (50.91%), Postives = 643/1047 (61.41%), Query Frame = 2
Query: 2336 ATNLPTQQELELIRNKLRESGRQIRFRAEVANTINLTRLLNSGCRMLHFAGQGNDKYLAFESGRDWKCGIMEPLEVASLKNLFQAGG-VRTELVFISSCSSEMSGRACVEAGVPHVVAVKHKANVTDEEARHFSTVFYDALFENGGRYTVKQAFDIALNFVNATHSSAHSKHAGGHFLLLPKGKKK----CGNHDVRV--FETLP------------EGQLEDETHPPTSRPPCKKAVPSYKGLVGLQHVVRLLLSPRAACVTITGEPGSGKTERAIQACDYVRERHHFDYFLWADCDKAALNSCSDKFSGNPFFVLPNCLNDSAW-----EDPCRLIGLAIGMPQPGPNSVQELHQFIFKNPNTNSGQPFQKVLLVLDNVDSLLERDGDAQDRLVQVLCNLCSMGDGGHLKLLATSEHKLLSGNEYFRGSTEMVARVEPLETRHASELLMDNLPRNLELRELGLQSGGLSLSDVLSAVQNHPVLKEVLEIAEGHPGTLVRLAPVLLDGSLDDACRLKEMTTRRRRCRADFRDKSYRRRSYGRSNSNRTAVSSK-----GELSVTMSLSSSTG-------APRSPMILSPMGPAFG-DTHVQRNRGDTRFLQRDSSSXXXXXXXXRAGMTSPVRPVP-------NETLREGPARAHSSSLPAMCRDPEWHGPPQPPPHSLLHQQLQE----HRR-VLAQEAPDDEPESPQMDLKEQRARDLARAAGVVDRGCRLVWVTATSRMAGGCRQDDGGGSGGEWSSRR---GKFVSWECLQESLMEHLR------------------EGTKTT---------------------------------RNWGDSIISP--HG-RVVDTPQLEFIRGILRRGQEAVTKARWGATGDECTEVGGDGRYDFISVEAFAKFSQWWAPLMATLGIIRSDWARTRPVRVHGFMSRVASKRLLMQRECGTFLLRFSESKMGALVISFTQPSVSSGRSSLSVKHSLVEVKRGGRCCIQAEKGGMRC-YASLHDFVRRIPELKKLYPDIPKEEAF-GETPRSP 5152
A+NLPT QELE + LR GRQ+ FRAEVANT+NLTRL+NSGC MLH+AG GN +YLAFES +W CGIMEPL+V L+NLF+ GG V+T+LVFI SCSSE+SG V AGVPHVVAVKH + VTD AR F+TVFYDAL ++ TVK+AFD AL +NA KH FLLLPKG++K C +R+ F+ P G+L DET RPPCKKAV SY GLV +Q VVRLLL P+ CVT+TGEPGSGKTE AIQACDYVRERHHFD FLWADCDKAAL++C + F FV+PN N ++ ED CRLIG+AIGMPQPGP++ ELHQFIFKNPNT+SGQPFQKVLLVLDNVDSL ERD DAQDRLV +L +LCSMG GGHLKLLATSE+KLL GN YFRG +EMVA V+PL+ +HASELLMDN PR+L+ ELGLQSGG S +DV+SAV+NHPVLKEVL+IA GHPGTLVRLAPVLL GSL+DA +LKE+ T+ CRA FRDKSYR+R + RS S +A SS E ++ S+ T AP +P MG AF D +R+R + +SS XXXX RP E EG R HS ++ E H Q H L ++ E HRR +LA+EA +++PE PQM+ + Q A D+A AA V +RG RLVW ATS M R++ G G GG R G+ V + L ESL HL EGT T R G+ + P H RV+D QL FIR ILR+ Q+ + KA E+ DG D ISV F++FSQWW PLM TLG IR+DWAR P+RVHGF+ R ++ LL + FLLRFSE G LV+S HSLVEV GG+C ++ +K G R Y SLHD V + L++LYPDIPKE+ F G+ P +P
Sbjct: 8 ASNLPTHQELEHLLETLRGCGRQVSFRAEVANTMNLTRLVNSGCLMLHYAGHGNGEYLAFESTTEWMCGIMEPLKVEYLENLFRVGGIVQTQLVFIGSCSSEVSGNVFVAAGVPHVVAVKHNSGVTDGAAREFATVFYDALIKH--EVTVKRAFDTALICINAHRCPP--KHEEDLFLLLPKGEEKSFGCCTAERLRLGRFQHAPFQEDQPFVVEHVGGKLVDETRQVPPRPPCKKAVSSYMGLVRVQFVVRLLLDPQTVCVTVTGEPGSGKTELAIQACDYVRERHHFDSFLWADCDKAALDACPETF-----FVIPNSPNGASGDSVSLEDLCRLIGVAIGMPQPGPSTANELHQFIFKNPNTDSGQPFQKVLLVLDNVDSLFERDEDAQDRLVHLLSDLCSMGGGGHLKLLATSEYKLLRGNGYFRGGSEMVATVKPLKMQHASELLMDNSPRDLQPEELGLQSGGFSKADVVSAVENHPVLKEVLKIAGGHPGTLVRLAPVLLHGSLNDARKLKEVATK---CRASFRDKSYRQRGHRRSGSCTSAGSSNVARELSEAGSSLGTSAPTSRSPHGSPAPATPSQRPAMGNAFSEDAGHRRDRRCVSLNRTNSSIDGSGXXXXXXXXXWGTRPXXXXXXXXXEEDGGEGRPRPHSGNV-GSHGSLERHDWLQSCVHQLSLERQDEVNGMHRRQMLAREALEEQPELPQMNTEMQHAWDMAEAARV-ERGSRLVWANATSYMVDDRRRNKGCGGGGWGVGGRLKLGEAVPLKYLLESLRWHLDVRMTVPCSSSSGGRHDPLEGTHYTYLDDGEEVDFEEVEADDXXXXXXXDQERAAGEGRRTGNRRMRPMRHATRVLDERQLGFIRSILRKNQK-LAKAEANTQDSTACEL--DGLEDPISVGTFSRFSQWWTPLMVTLGNIRNDWARIWPIRVHGFIGRHEAQALLRMKPTA-FLLRFSERHPGKLVVSRA-----------CHHHSLVEVTEGGQCFMEVDKRGTRRKYESLHDLVTQNSLLRQLYPDIPKEQVFKGKAPAAP 1025
BLAST of mRNA_Ecto-sp13_S_contig1844.5744.1 vs. uniprot
Match: A0A6H5JPT3_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT3_9PHAE) HSP 1 Score: 747 bits (1929), Expect = 7.570e-247 Identity = 388/474 (81.86%), Postives = 401/474 (84.60%), Query Frame = 2
Query: 3944 MSLSSSTGAPRSPMILSPMGPAFGDTHVQRNRGDTRFLQRDSSSXXXXXXXXRAGMTSPVRPVPNETLREGPARAHSSSLPAMCRDPEWHGPPQPPPHSLLHQQLQEHRRVLAQEAPDDEPESPQMDLKEQRARDLARAAGVVDRGCRLVWVTATSRMAGGCRQDDGGGSGGEWSSRRGKFVSWECLQESLMEHLREGTKTTRNWGDSIISPHGRVVDTPQLEFIRGILRRGQEAVTKARWGATGDECTEVGGDGRYDFISVEAFAKFSQWWAPLMATLGIIRSDWARTRPVRVHGFMSRVASKRLLMQRECGTFLLRFSESKMGALVISFTQPSVS------------------------------------------SGRSSLSVKHSLVEVKRGGRCCIQAEKGGMRCYASLHDFVRRIPELKKLYPDIPKEEAFGETPRSPPATASAPGAAQRDELVAEIESLVKERMSA 5239
MSLSSSTGAPRSPMILSP+GPAFGDTHVQRNRGDTRFLQRDSSS RAGMTS VRPVP+ET+REGPARAHSSS PA CR+PEWHG PQPPPHSLLHQQLQE+RRV AQEAP EPES QMDLKEQRA DLARAAGVVDRGCRL+WVTATSRMA GCRQDDGGGSGG WSSRRG+ VSWECLQESLMEHLREGTKTTRNW D II PHGRVVDTPQLEFIRGILRRGQEAV KARWGATGDECTEVGGDGR DF+SVEAFA FSQWWAPLMATLGIIR+DWA TRPVRVHGFMSRVASKRLLMQRECGTFLLRFSES+MGALVISFTQPSVS SGR SLSVKHSLVEVK GGRCCIQAEKGGMRCY SLHDFVR+IPELKKLYPDIPKEEAFGETPRSPPATASAPGAA+RDELVAEIESLVK +MSA
Sbjct: 1 MSLSSSTGAPRSPMILSPIGPAFGDTHVQRNRGDTRFLQRDSSSGGGSGGSGRAGMTSLVRPVPSETVREGPARAHSSSPPARCRNPEWHGQPQPPPHSLLHQQLQEYRRVSAQEAPCIEPESSQMDLKEQRAWDLARAAGVVDRGCRLIWVTATSRMARGCRQDDGGGSGGGWSSRRGEIVSWECLQESLMEHLREGTKTTRNWDDPIILPHGRVVDTPQLEFIRGILRRGQEAVAKARWGATGDECTEVGGDGRDDFVSVEAFANFSQWWAPLMATLGIIRNDWATTRPVRVHGFMSRVASKRLLMQRECGTFLLRFSESRMGALVISFTQPSVSVSRLSRISRCLVPFISCAGRLACCLQGSPINPRIVLQQFQLRSGRRSLSVKHSLVEVKWGGRCCIQAEKGGMRCYGSLHDFVRQIPELKKLYPDIPKEEAFGETPRSPPATASAPGAARRDELVAEIESLVKGKMSA 474
BLAST of mRNA_Ecto-sp13_S_contig1844.5744.1 vs. uniprot
Match: D7FNX8_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX8_ECTSI) HSP 1 Score: 598 bits (1541), Expect = 1.410e-183 Identity = 424/1045 (40.57%), Postives = 541/1045 (51.77%), Query Frame = 2
Query: 2369 LIRNKLRESGRQIRFRAEVANTINLTRLLNSGCRMLHFAGQGNDKYLAFESGRDWKCGIMEPLEVASLKNLFQAGGVRTELVFISSCSSEMSGRACVEAGVPHVVAVKHKANVTDEEARHFSTVFYDALFENGGRYTVKQAFDIALNFVNATHSSAHSKHAGGHFLLLPKGKKKCGNHDVRVFETLPEGQLEDETHPPTSRPPCKKAVPSYKGLVGLQHVVRLLLSPRAACVTITGEPGSGKTERAIQACDYVRERHHFDYFLWADCDKAALNSCSDKFSGNPFFVLPNCLNDSAWEDPCRLIGLAIGMPQPGPNSVQELHQFIFKNPNTNSGQPFQKVLLVLDNVDSLLERDGDAQDRLVQVLCNLCSMGDGGHLKLLATSEHKLLSG-NEYFRGSTEMVARVEPLETRHASELLMDNLPRNLELRELGLQ-SGGLSLSDVLSAVQNHPVLKEVLEIAEGHPGTLVRLAPVLLDGSLDDACRLKEMTTRRRRCRADFRDKSYRRRSYGRSNSNRTAVSSKGELSV--------------TMSLSSSTGA--PRSPMILSPMGPAFG-DTHVQRNRGDTRFLQRDSSSXXXXXXXXRAGMTSPVRPVPNETLREGPARAHSSSL------------PAMCR---DPEWH-----GPPQPPPHSLLH--QQLQEHRRVLAQEAPDDEPESPQMDLKEQRARDLARAAGVVDRGCRLVWVTATSR-MAGGCRQDDGGGS---GGEWSSRRG--------KFVSWECLQESLMEHLREGTKTTRNWGDSIIS--PHG----------------RVVDTPQ--------LEFIRGILRRGQEAVT---------KARWGATGDECTEVGGDGR------------------YDFISVEAFAKFSQWWAPLMATLGIIRSDWARTRPVRVHGFMSRVASKRLLMQRECGTFLLRFSESKMGALVISFTQ------PSVSS----------GRSSLSVKHSLVEVKRGGRCCIQAEKGGMRCYASLHDFVRRIPELKKLYPDIPKEEAFGE 5137
+IR KLRESGRQIRFR+EVA N LLNSGCRMLH+ G G++++LAFES D CGIMEPL V LKNLFQAGGVRTELVFISSCSSE SG A V+AGVPHVVAVK + +VTD+ A+ F+ FYDAL GR+TVKQAFDIALN VNA H++ G HFLLLP G GNHDVR+F+TLPEG+ DET P +RP C + VP Y+GL LQ IGLAIGM QPGPNS +EL +F+F P G+ QKVLLVL++VDSL E GDA+DR++++L NLCS G+ HLKLL TSE +L NE FR +E VA+V+PL+ R A++LL++ +P +EL L S + D+L A++ HPVLK AEGHPGTL+RLAP+L D +++DAC L R +++ +++ R R+ SN + SS G MSL +S G P +P +G A DTH Q+ + S AG P+ N G + HSS + PA R P H PQ P H H Q+ L + +EP+ PQM +E+RA D AR AG++DRGCRLVWV AT+ + G D GGGS G W + V W+ L+ LM+HL G T + D ++ P+G V+TPQ L F+RG+L+ QE V +A G G E +G G D IS++AF +FS WWAPLM TL ++R+DWA T P RVHGF+SR+A++R L++RE GTFLLRFSES+ G LV+SFT+ P SS S+ VKH LVEV+RGG C I+ E+G Y SLHD V ++ LYPD+ KE+AF E
Sbjct: 1 MIRMKLRESGRQIRFRSEVAKPSNFRELLNSGCRMLHYTGHGSNEFLAFESNDDRMCGIMEPLHVGPLKNLFQAGGVRTELVFISSCSSEASGNAFVDAGVPHVVAVKREESVTDQAAQQFAKQFYDALLSEAGRFTVKQAFDIALNTVNA--HPPHARPQGDHFLLLPHG----GNHDVRIFDTLPEGRFVDETREPPARPRCARPVPFYQGLEELQ------------------------------------------------------------------------------------IGLAIGMTQPGPNSEEELVRFLFDRPTVQEGRTCQKVLLVLEDVDSLFEAGGDARDRVLKLLSNLCSKGE--HLKLLVTSEQRLQRDTNERFRHGSERVAKVKPLKDRDAAQLLINKVPTRFTKKELRLSLSHRCTREDILKALEAHPVLKA----AEGHPGTLLRLAPLLEDHNVNDACVLHRANQHR----LEYKQETHTLRR-NRAGSNTSLASSAGAAGTGMGGGGVALPSGASDMSLGNSMGGGRPMTPTQPHLLGHAMSHDTHFQQQQXXXXXXXXXVSPFFQDLSSW-AGGGEMHHPLLNGAGMAGGSSIHSSGIGGSGHGIHSAAAPAAARASSHPHHHQRRHSSHPQSPTHPRQHHPQRRMTVMNQLMAQVELEEPDPPQMTPEEKRAWDTARTAGLMDRGCRLVWVKATTNALLNGWTYDGGGGSDNGGFGWPAEGAGAGGVTNYDCVPWDYLRRGLMQHLC-GKLTIPSSHDEVVDEGPYGWRGDASSVGVGVGNGYGAVNTPQVRWMNEEELAFVRGVLKAKQEKVRLKQEKLRQQRASRGYAGTELVSIGSSGAADAASGRXXXXXXXXXXXXDVISLDAFVEFSLWWAPLMPTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRASSMLTSAPRSRPRSQSMCVKHCLVEVRRGGWCYIEVEQGSKVPYPSLHDLVLACSSMQVLYPDVRKEDAFDE 942
BLAST of mRNA_Ecto-sp13_S_contig1844.5744.1 vs. uniprot
Match: A0A6H5KH01_9PHAE (CHAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH01_9PHAE) HSP 1 Score: 554 bits (1427), Expect = 1.090e-170 Identity = 351/750 (46.80%), Postives = 441/750 (58.80%), Query Frame = 2
Query: 2345 LPTQQELELIRNKLRESGRQIRFRAEVANTINLTRLLNSGCRMLHFAGQGNDKYLAFESGRDWKCGIMEPLEVASLKNLFQAGGVRTELVFISSCSSEMSGRACVEAGVPHVVAVKHKANVTDEEARHFSTVFYDALFENGGRYTVKQAFDIALNFVNATHSSAHSKHAGGHFLLLPKGKKKCGNHDVRVFETLPEGQLEDETHPPTSRPPCKKAVPSYKGLVGLQHVVRLLLSPRAACVTITGEPGSGKTERAIQACDYVRERHHFDYFLWADCDKAALNSCSDKFSGNPFFVLPNCLNDSAW--EDPCRLIGLAIGMPQPGPNSVQELHQFIFKNPNTNSGQPFQKVLLVLDNVDSLLERDGDAQDRLVQVLCNLCSMGDGGHLKLLATSEHKLLSG-NEYFRGSTEMVARVEPLETRHASELLMDNLPRNLELRELGLQ-SGGLSLSDVLSAVQNHPVLKEVLEIAEGHPGTLVRLAPVLLDGSLDDACRLKEMTTRRRRCRADFR--DKSYRRRSYGRSNSNRTAVSSKGELSV--------------TMSLSSSTGAPRSPMILSP--MGPAFG-DTHVQRNRGDTRFLQRDSSSXXXXXXXXRAGMTSPVRPVPNETLREGPARAHSSSLPAM-----------------------CRDPEWHGPPQPPPHSLLHQQLQEHRRVLAQEAPDDEPESPQMDLKEQRARDLARAAGVVDRGCRLVWVTATSR-MAGGCRQDDGGGS 4453
L T +EL++IR KLRESGRQIRFR+EVA N LLNSGCRMLH+ G GN+++LAFES D CGIMEPL V LKNLFQAGGV+TELVFISSCSSE SG A V+AGVPHVVAVK + +VTD+ A+ F+ FYDAL G +TV+QAFDIALN VNA +++ G HFLLLP G GNHDVR+F+TLPEG DET P +RP C + VP Y+GL LQ VV +L+ P ACVT+TGE GSGK+ERAIQACDYVR RHHFD WAD A + +N S W +DPCRLIG+AIGM QPGP+S +EL +F+F P G+ KVLLVLD+VDSL E GDA+DR++++L NLCSM + HLKLL TSE L NE FR +E VA+V PL R A++LL+D +P +EL L S + D+L A++ H VLK AEGHPGTL+RLAP+L D +++DAC L+ +T +CR +++ ++ RR R++SN + SS G MSL +S G R P +G A DTH Q+ T + +S AG P+ N G + HSS + R H PH Q+ L + +EP+ PQM +E+RA D AR AG++DRGCRLVWVTAT+ + G D GGGS
Sbjct: 50 LGTSEELKMIRMKLRESGRQIRFRSEVAKPSNFRELLNSGCRMLHYTGHGNNEFLAFESNDDRMCGIMEPLHVGPLKNLFQAGGVQTELVFISSCSSEASGNAFVDAGVPHVVAVKREESVTDQAAQQFAKQFYDALLSEAGSFTVQQAFDIALNTVNA--HPPYARPQGDHFLLLPHG----GNHDVRIFDTLPEGSFVDETREPPARPRCARPVPFYQGLEELQKVVEMLVDPVTACVTVTGEHGSGKSERAIQACDYVRMRHHFDALWWADMKHA----------------MATAINSSVWFYDDPCRLIGIAIGMTQPGPSSEEELVRFLFDRPTVQEGRTCHKVLLVLDDVDSLFEAGGDARDRVLKLLSNLCSMSE--HLKLLVTSEQSLQRDTNERFRHGSERVAKVRPLNDRDAAQLLLDKVPTKFTKKELRLSLSHRCTREDILKALEAHRVLKA----AEGHPGTLLRLAPLLEDHNVNDACVLERVT----QCRLEYKLEPQTLRR---NRASSNTSLASSVGAAGTGMGGGGVALPSGASDMSLGNSMGGGRPMTPTQPHFLGHAISHDTHFQQQHNGTG--NGNGASPFFQEFSSWAGGGEMHHPLLNGAGMAGGSSIHSSGIGGSGHGTHSAAXXXXXXRPSXXXXXXXRRHSAHLQSPTHPHQHRPQRRMTVVNQLMAQVELEEPDPPQMTPREKRAWDTARTAGLMDRGCRLVWVTATTNALLNGWTYDGGGGS 762
BLAST of mRNA_Ecto-sp13_S_contig1844.5744.1 vs. uniprot
Match: A0A6H5JKN2_9PHAE (CHAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKN2_9PHAE) HSP 1 Score: 389 bits (999), Expect = 1.900e-120 Identity = 194/207 (93.72%), Postives = 199/207 (96.14%), Query Frame = 2
Query: 2270 NSIVLQPRAPVTRRHQLNFFELATNLPTQQELELIRNKLRESGRQIRFRAEVANTINLTRLLNSGCRMLHFAGQGNDKYLAFESGRDWKCGIMEPLEVASLKNLFQAGGVRTELVFISSCSSEMSGRACVEAGVPHVVAVKHKANVTDEEARHFSTVFYDALFENGGRYTVKQAFDIALNFVNATHSSAHSKHAGGHFLLLPKGKKK 2890
NSIVLQPRAPVTRRHQLNFFELATNLPT QELELIRN LRE GRQIRFRAEVANT+NLTRLL SGCRMLHFAGQGNDKYLAFESGRDW CGIMEPLEVASLKNLFQAGGVRTELVFISSCSSEMSGRACVEAGVPHVVAVKH+ANVTDEEA HFSTVFYDAL ENGGRYTVKQAFDIALNFVNATHSSA ++HAGGHF+LLPKGKKK
Sbjct: 2 NSIVLQPRAPVTRRHQLNFFELATNLPTHQELELIRNTLRECGRQIRFRAEVANTMNLTRLLCSGCRMLHFAGQGNDKYLAFESGRDWNCGIMEPLEVASLKNLFQAGGVRTELVFISSCSSEMSGRACVEAGVPHVVAVKHEANVTDEEALHFSTVFYDALLENGGRYTVKQAFDIALNFVNATHSSAPNRHAGGHFVLLPKGKKK 208
BLAST of mRNA_Ecto-sp13_S_contig1844.5744.1 vs. uniprot
Match: A0A6H5JKD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKD1_9PHAE) HSP 1 Score: 299 bits (766), Expect = 1.700e-89 Identity = 150/161 (93.17%), Postives = 155/161 (96.27%), Query Frame = 2
Query: 3293 MPQPGPNSVQELHQFIFKNPNTNSGQPFQKVLLVLDNVDSLLERDGDAQDRLVQVLCNLCSMGDGGHLKLLATSEHKLLSGNEYFRGSTEMVARVEPLETRHASELLMDNLPRNLELRELGLQSGGLSLSDVLSAVQNHPVLKEVLEIAEGHPGTLVRLAP 3775
M QPGPNS QELHQFIFKNPNT+SGQPFQKVLLVLD+VDSLLERDGDAQDRLVQ LCNLCSMGDGGHLKLLATSEHKLLSGNE+FRG TEMVARVEPLETRHASELLMDNLPRNL+LRELGLQSGGLSL+DVLSAVQNHPVLKEVLEIAEGHPGTLVR P
Sbjct: 1 MSQPGPNSEQELHQFIFKNPNTDSGQPFQKVLLVLDSVDSLLERDGDAQDRLVQFLCNLCSMGDGGHLKLLATSEHKLLSGNEFFRGGTEMVARVEPLETRHASELLMDNLPRNLKLRELGLQSGGLSLADVLSAVQNHPVLKEVLEIAEGHPGTLVRDEP 161
BLAST of mRNA_Ecto-sp13_S_contig1844.5744.1 vs. uniprot
Match: A0A6H5JN51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN51_9PHAE) HSP 1 Score: 245 bits (626), Expect = 3.960e-71 Identity = 109/128 (85.16%), Postives = 118/128 (92.19%), Query Frame = 2
Query: 2894 GNHDVRVFETLPEGQLEDETHPPTSRPPCKKAVPSYKGLVGLQHVVRLLLSPRAACVTITGEPGSGKTERAIQACDYVRERHHFDYFLWADCDKAALNSCSDKFSGNPFFVLPNCLNDSAWEDPCRLI 3277
GNHD+R+FETLPEGQL DETHPPT RPPCKKAVPS+KGL G+Q VVRLLL+P+AACVT+TGE GSGKTERAIQACDYVRERHHFD FLWADCDKAA NSCSDK SG+PFF L NCLNDSAWEDPCRL+
Sbjct: 31 GNHDIRIFETLPEGQLVDETHPPTPRPPCKKAVPSFKGLAGVQQVVRLLLNPQAACVTVTGEHGSGKTERAIQACDYVRERHHFDSFLWADCDKAAFNSCSDKSSGHPFFALQNCLNDSAWEDPCRLV 158
BLAST of mRNA_Ecto-sp13_S_contig1844.5744.1 vs. uniprot
Match: A0A4D9DD68_9STRA (SH2 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DD68_9STRA) HSP 1 Score: 214 bits (546), Expect = 4.010e-53 Identity = 283/995 (28.44%), Postives = 403/995 (40.50%), Query Frame = 2
Query: 2345 LPTQQELELIRNKLRESGRQIRFRAEVANTINLTRLLNSGCRMLHFAGQGNDKYLAFESGRDWKCGIMEPLEVASLKNLFQAGGVRTELVFISSCSSEMSGRACVEAGVPHVVAVKHKANVTDEEARHFSTVFYDALFENGGRYTVKQAFDIALNFVNATHSSAHSKHAGGHFLLLPKGKKKCGNHDVRVFETLPE---GQLEDETHPPTSRPPCKKAVPSYKGLVGLQHVVRLLLSP-RAACVTITGEPGSGKTERAIQACDYVRERHHFDYFLWADCDKAALNSCSDKFSGNPFFVLPNCLNDSAWEDPCRLIGLAIGMPQPGPNSVQELHQFIFKNPNTNSGQPFQKVLLVLDNVDSLLERDGDAQDRLVQVLCNLCSMGDGGHLKLLAT-SEHKLLSGNEYFRGSTEMVARVEPLETRHASELLMDNLPRNLELRELGLQSGG---------------------------------------LSLSDVLSAVQNHPVLKEVLEIAEGHPGTLVRLAPVL----LDGSLDDACRLKEMTTRRRRCRA-DFRDKSYRRRSYGRSNSNRTAVSSKGELSVTMSLSSSTGAPRSPMILSPMGPAFGDTHVQRNRGDTRFLQRDSSSXXXXXXXXR--AGMTSPVRPVPNETLREGPARAH--SSSLPAMCRDPEWHGPPQPPPHSLLHQQLQEHRRVLAQEAPDDEPESPQMDLKEQRARDLARAAGVVDRGCRLVWVTATSRMAGGCRQDDGGGSGGEWSSRRGKFVSWECLQESLMEHLREGTKTTRNWGDSIISPHGRVVDTPQLEFIRG-ILRRGQEAVTKARWGATGDECTEVGGDGRYDFISVEAFAKFSQWWAPLMATLGIIRSDWARTRPVRVH-GFMSRVASKRLLMQRECGTFLLRFSESKMGALVISFTQPSVSSGRSSLS-----------VKHSLVEVKRGGRCCIQAEKGGMRCYASLHDFVRRIPELKKLYPDIPKEEAF 5131
L T QEL+ +R L ESGR++ FRAEVA N L+ GCRMLH+ G GN L FE+ G PL V L +LF+AGGVRT+LVF+S+C SE +G A AGVPHVVAVK VTD AR F+ FY +L TV+ +F I + + A +SA + + FLLLP GNHD+ +F+ + G L DET PP K V +Q + LL P R CVTI GE G GK+ A +AC+Y+ ER F A+ S K +F + A E C IG A+ + G + ++L + + TN P ++VLL+LD +D L + LV VL L G HL L A S H +G+ + + E + + PL A+ LL+ PR L E+ L + ++ ++ L+ + + PVL+ + GHP ++ AP+L L+G L +A R + + A +F ++ A+ + + + T +P S +L P G A G R T SS R A + S ++ + LR+ AR S S P+ + G P H LLH R+ R AGV +T+ + RQD G S S +RG + REG + ++S H + F+R ++ RG + GR + W+ + + L II +W P V GF R S+ L ++ GTFLLRFS S +G L ISF P S S ++H LV V G C + E G R Y +L + I L YPD+PK++
Sbjct: 11 LDTGQELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFENEN----GEANPLSVEMLTDLFRAGGVRTQLVFVSACHSESAGHAFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGN---TVRNSFQIGVTSIMA-EASAATYNEDKKFLLLPGD----GNHDIAIFDASSQAIGGPLLDETPPPVKSTVHKPPVFFLGRNAKVQECISLLHPPQRYRCVTIRGEAGIGKSALAFRACEYMAERRMFH----------AMYQVSLK---ETYF------HPGAKEALCETIGTALEVG--GARNSRDLLRAL---QGTN---PARRVLLLLDGIDRFLTQGSV----LVPVLNFLLGRHPGFHLLLTAEGSIHD--NGDGHLEKTPEKIVELGPLAEIPAAHLLVYVAPRRLRFEEMTLLTPAPVVSPPPLRPTATAPPSSTXXXXXXPXXXXXXXXXXXVAVARTEALAQLASSPVLRSL----HGHPKAILMFAPLLEGHRLEGLLPEAKRCYRLAAASKESGATNFNGPGPAEADREDADVPLPAILHFQDEAAGRLWAELTASPSS--MLGPKGGASGGGASYRQSYLTLSSTSSSSFLSLGVPWYRLAAALQSQLKEM---LLRKVQARVAPPSDSSPSSAHES---GDSLPTLHPLLH-------------------------------RNETRGAGVDSGRGWQSQLTSNGSSSRRLRQDSLGRSASLSSFQRGPGLEG-----------REGKEGGLKGRMRMLSDH-------DIMFLRSKLVSRGG-----GKXXXXXXXXXXXXXXGRQETAFPLGL------WSLMFSALEIIYREWLCEAPTPVVIGFSGRKESEAALKEKPSGTFLLRFSTSHLGLLAISFVAPPPSPSASVXXXXXGSAPVGPPIQHCLVRVTEKG-CELFMEPGRKR-YDNLQALLEDIATLTLFYPDVPKQDVL 886 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1844.5744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1844.5744.1 >prot_Ecto-sp13_S_contig1844.5744.1 ID=prot_Ecto-sp13_S_contig1844.5744.1|Name=mRNA_Ecto-sp13_S_contig1844.5744.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1012bp MLHFAGQGNDKYLAFESGRDWKCGIMEPLEVASLKNLFQAGGVRTELVFIback to top mRNA from alignment at Ecto-sp13_S_contig1844:2171..13362+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1844.5744.1 ID=mRNA_Ecto-sp13_S_contig1844.5744.1|Name=mRNA_Ecto-sp13_S_contig1844.5744.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=11192bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1844:2171..13362+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1844:2171..13362+ >mRNA_Ecto-sp13_S_contig1844.5744.1 ID=mRNA_Ecto-sp13_S_contig1844.5744.1|Name=mRNA_Ecto-sp13_S_contig1844.5744.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3036bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1844:2171..13362+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |