mRNA_Ecto-sp13_S_contig18431.5742.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18431.5742.1 vs. uniprot
Match: D7G1H9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H9_ECTSI) HSP 1 Score: 386 bits (991), Expect = 1.040e-132 Identity = 195/214 (91.12%), Postives = 196/214 (91.59%), Query Frame = 1
Query: 40 GDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPPTSITSGEAAGVGAAAT-GSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 678
GDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPP GSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLAS+GGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV
Sbjct: 90 GDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 303
BLAST of mRNA_Ecto-sp13_S_contig18431.5742.1 vs. uniprot
Match: A0A6H5L0Y5_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y5_9PHAE) HSP 1 Score: 383 bits (983), Expect = 2.450e-128 Identity = 195/219 (89.04%), Postives = 195/219 (89.04%), Query Frame = 1
Query: 37 GGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPPTSITSGEAAGVGAAATGS-----GPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 678
GGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPP GPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV
Sbjct: 311 GGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXXXXXXXGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 529
BLAST of mRNA_Ecto-sp13_S_contig18431.5742.1 vs. uniprot
Match: A0A6H5KGF5_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGF5_9PHAE) HSP 1 Score: 218 bits (555), Expect = 1.500e-66 Identity = 118/203 (58.13%), Postives = 136/203 (67.00%), Query Frame = 1
Query: 70 LFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPPTSITSGEAAGVGAAATGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 678
LFPG+RLLHA+P V V FFT +ECD YI+ S T SG G G P +SAT + TSTTWFH +++ PEL+AKAS L+GV + +WEE QTVRYRPGE+F WHLDALPP+ ASKGGQR AT+LVYLT M GGATAFRDLGPLRVRP+KG L+FFPS GG PFD R LHAGEV
Sbjct: 117 LFPGIRLLHADPVVFEVEGFFTPQECDAYIAMS-----TLKKSGRRKG------GLAPTELQSATTSSQCQ--QXXTSTTWFHHYASAPELVAKASLLLGVD-DYSKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEV 305
BLAST of mRNA_Ecto-sp13_S_contig18431.5742.1 vs. uniprot
Match: A0A7S2KCF3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF3_9STRA) HSP 1 Score: 219 bits (559), Expect = 3.120e-66 Identity = 119/207 (57.49%), Postives = 141/207 (68.12%), Query Frame = 1
Query: 73 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPPTSITSGEAAGVGAAATGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGP-----LRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 678
F R+LH +P VI V DFFT EECD+YI+ S P G+A M RS T+G D A +QRTSTTWFH + VPELMAK+S L G+ + G +EE QTVRY+P +KFTWHLDAL P + SKGGQR ATLLVYLT++ DGGAT FRDLGP L+V+P+KGSALLFFP+ GG P+ PFDIRTLHAGEV
Sbjct: 202 FDKFRVLHIDPLVIAVDDFFTHEECDKYIAMS--DPTAGNKDGDAV------------MTRSMTVGKDAAAKSQRTSTTWFHHYKNVPELMAKSSRLFGLD-DIGVFEEPQTVRYQPDQKFTWHLDALAPGSENISKGGQRTATLLVYLTDLGPEDGGATTFRDLGPAEGEPLKVQPKKGSALLFFPAAGGIPNTPFDIRTLHAGEV 393
BLAST of mRNA_Ecto-sp13_S_contig18431.5742.1 vs. uniprot
Match: A0A7S1ZRX7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRX7_9STRA) HSP 1 Score: 209 bits (532), Expect = 2.710e-64 Identity = 107/207 (51.69%), Postives = 140/207 (67.63%), Query Frame = 1
Query: 73 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPPTSITSGEAAGVGAAATGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLG-----PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 678
F R+LH +P V+ V DF T +ECD ++ + +P + +G +S T+G D+ + +QRTSTTWFH + +P+LMAKAS L+G+ + RWEE QTVRYR EKFTWHLDAL P+ +LA GGQR+ATL+VYL ++PEG GG+T FRDLG PL+V P+KGSAL+FFP+ GG P+ PFDIRTLHAGE
Sbjct: 26 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKYDKNANTAPMKIG-----------QSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNID-RWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEA 220
BLAST of mRNA_Ecto-sp13_S_contig18431.5742.1 vs. uniprot
Match: A0A7S2N1B0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1B0_9STRA) HSP 1 Score: 207 bits (528), Expect = 2.460e-63 Identity = 108/207 (52.17%), Postives = 138/207 (66.67%), Query Frame = 1
Query: 73 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPPTSITSGEAAGVGAAATGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLG-----PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 678
F R+LH +P ++ + DF T ECD YIS + +P + +G +S T+G D+ + +QRTSTTWFH + + LMAKAS L+G+ E RWEE QTVRYR EKFTWHLDAL P+ +L GGQR+ATLLVYL ++P+G GG+T FRDLG PL+V+P+KGSALLFFP+ GG P+ PFDIRTLHAGE
Sbjct: 57 FTKFRILHTDPMLLSIDDFLTPTECDTYISLTSNPKYDKNANTAPMEIG-----------QSKTVGKDMYSKSQRTSTTWFHHYRGMAGLMAKASRLLGLKGIE-RWEEPQTVRYRRSEKFTWHLDALAPSEELTKAGGQRVATLLVYLADLPDGCGGSTMFRDLGGESGEPLKVQPKKGSALLFFPAAGGIPNVPFDIRTLHAGEA 251
BLAST of mRNA_Ecto-sp13_S_contig18431.5742.1 vs. uniprot
Match: K0SVE6_THAOC (Fe2OG dioxygenase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVE6_THAOC) HSP 1 Score: 213 bits (541), Expect = 3.540e-63 Identity = 117/208 (56.25%), Postives = 142/208 (68.27%), Query Frame = 1
Query: 73 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPPTSITSGEAAGVGAAATGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLA---SKGGQRIATLLVYLTEMPEGDGGATAFRDLG---PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 678
F R+LH +P VI V DFFT EECD+Y+ S+ EA + G +S T+G D + AQRTSTTWFH ++ VPELMA+A+ L+G+P R+EE QTVRYR EKFTWHLDAL +PD+A S GQR++TLLVYLT++ +GGAT FRDLG PL+VRP+KGSALLFFPS GG PDCPFDIRTLH GE
Sbjct: 229 FEQFRVLHVDPMVIAVDDFFTSEECDKYVQMSIDAENNQDQ--EAGALQPLLLG------QSQTVGKDSRSKAQRTSTTWFHHYAGVPELMARAARLLGLP-GISRFEEPQTVRYRRSEKFTWHLDAL--SPDVANDSSSAGQRVSTLLVYLTDLKSEEGGATMFRDLGGDGPLKVRPKKGSALLFFPSAGGIPDCPFDIRTLHCGEA 425
BLAST of mRNA_Ecto-sp13_S_contig18431.5742.1 vs. uniprot
Match: A0A7S4QXQ4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QXQ4_9STRA) HSP 1 Score: 209 bits (532), Expect = 4.550e-63 Identity = 107/207 (51.69%), Postives = 140/207 (67.63%), Query Frame = 1
Query: 73 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPPTSITSGEAAGVGAAATGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLG-----PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 678
F R+LH +P V+ V DF T +ECD ++ + +P + +G +S T+G D+ + +QRTSTTWFH + +P+LMAKAS L+G+ + RWEE QTVRYR EKFTWHLDAL P+ +LA GGQR+ATL+VYL ++PEG GG+T FRDLG PL+V P+KGSAL+FFP+ GG P+ PFDIRTLHAGE
Sbjct: 123 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKYDKNANTAPMKIG-----------QSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNID-RWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEA 317
BLAST of mRNA_Ecto-sp13_S_contig18431.5742.1 vs. uniprot
Match: A0A7S2UAB3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAB3_9STRA) HSP 1 Score: 212 bits (539), Expect = 8.090e-63 Identity = 118/207 (57.00%), Postives = 140/207 (67.63%), Query Frame = 1
Query: 73 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPPTSITSGEAAGVGAAATGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLG-----PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 678
F R+LH +P V+ V DFFT EECD I+RS + T IT+ G T + +S T+G D A AQRTSTTWFH ++ VPELMAKA L+G+ + +EE QTVRYR E FTWHLDAL P P+LA KGGQR ATLLVYLT++ E DGGAT FRDLG PL+VRP+KGSALLFFP+ GG P P D+RTLH GE
Sbjct: 235 FSKFRVLHVDPMVLCVDDFFTPEECDALIARSTT---TVITADNNEKEGT--TLLPMKIGQSKTVGKDSRARAQRTSTTWFHHYAGVPELMAKACRLMGIN-DISAFEEPQTVRYRRTEHFTWHLDALAPTPELADKGGQRCATLLVYLTDLSEKDGGATMFRDLGGSDGEPLKVRPKKGSALLFFPAAGGIPSVPLDLRTLHCGEA 435
BLAST of mRNA_Ecto-sp13_S_contig18431.5742.1 vs. uniprot
Match: A0A7S2KB24_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KB24_9STRA) HSP 1 Score: 209 bits (531), Expect = 8.410e-62 Identity = 120/219 (54.79%), Postives = 141/219 (64.38%), Query Frame = 1
Query: 73 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPPTSITSGEAAGVGAAATGSGPHMQ-----RSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEG--RWEEAQTVRYRPGEKFTWHLDALPPAP-DLASKGGQRIATLLVYLTEMPEGDGGATAFRDLG---------PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 678
F R+LH +P V+ + DFFT+EECD+Y+ S+ S A G T +Q +S T+G D + AQRTSTTWFH + VPELMAKAS L+G+ EG R+EE QTVRYR EKFTWHLDAL P + S GQRIATLLVYLT++P G GGAT FRDLG PL+VRP+KGSALLFFPS GG P PFDIRTLH GE
Sbjct: 204 FEKFRVLHTDPMVLAIDDFFTNEECDKYVQISIDAEKQQTNS---AAAGDETTQEETALQPMLLGQSQTVGKDSRSKAQRTSTTWFHYYKGVPELMAKASRLLGL---EGIDRFEEPQTVRYRRNEKFTWHLDALSPEEANNPSGSGQRIATLLVYLTDVPAGSGGATMFRDLGGNNGAEDSQPLKVRPKKGSALLFFPSAGGIPGAPFDIRTLHCGEA 416 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18431.5742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18431.5742.1 >prot_Ecto-sp13_S_contig18431.5742.1 ID=prot_Ecto-sp13_S_contig18431.5742.1|Name=mRNA_Ecto-sp13_S_contig18431.5742.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=226bp AVASAVGGEKKGGGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDback to top mRNA from alignment at Ecto-sp13_S_contig18431:4..3488- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18431.5742.1 ID=mRNA_Ecto-sp13_S_contig18431.5742.1|Name=mRNA_Ecto-sp13_S_contig18431.5742.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3485bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18431:4..3488- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18431:4..3488- >mRNA_Ecto-sp13_S_contig18431.5742.1 ID=mRNA_Ecto-sp13_S_contig18431.5742.1|Name=mRNA_Ecto-sp13_S_contig18431.5742.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=678bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18431:4..3488- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |