prot_Ecto-sp13_S_contig1843.5741.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1843.5741.1
Unique Nameprot_Ecto-sp13_S_contig1843.5741.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length242
Homology
BLAST of mRNA_Ecto-sp13_S_contig1843.5741.1 vs. uniprot
Match: A0A6H5KVH9_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVH9_9PHAE)

HSP 1 Score: 443 bits (1140), Expect = 8.640e-157
Identity = 236/241 (97.93%), Postives = 240/241 (99.59%), Query Frame = 0
Query:    1 MASGDVKYWDTSYGKTLDQLDGFISTMESGSGDAREDAISEASRSLKRLAGMRRSYNLEIKLLKDPNTKAHYNLEKSQKDSRYATLQSRFDAAKASGESTRDELFGGRRDVESGEAQGKSAEAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKFIQCFGCLNVSAMVAIIVYVVVQQVELPGGDDNDVPDPAAGS 241
            MASGDVKYWDTSYGKTLDQLDGFI+TMESGSGDAREDA+SEASRSLKRLAGMRRSYNLEIKL+KDPN KAHYNLEKSQKDSRYATLQSRFDAAKASG+STRDELFGGRRDVESGEAQGKSAEAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKFIQCFGCLNVSAMVAIIVYVVVQQVELPGGDDNDVPDPAAGS
Sbjct:    1 MASGDVKYWDTSYGKTLDQLDGFIATMESGSGDAREDAMSEASRSLKRLAGMRRSYNLEIKLIKDPNMKAHYNLEKSQKDSRYATLQSRFDAAKASGDSTRDELFGGRRDVESGEAQGKSAEAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKFIQCFGCLNVSAMVAIIVYVVVQQVELPGGDDNDVPDPAAGS 241          
BLAST of mRNA_Ecto-sp13_S_contig1843.5741.1 vs. uniprot
Match: A0A835Z1V1_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V1_9STRA)

HSP 1 Score: 191 bits (484), Expect = 3.710e-57
Identity = 110/226 (48.67%), Postives = 157/226 (69.47%), Query Frame = 0
Query:    4 GDVKYWDTSYGKTLDQLDGFISTMESGSGDAREDAISEASRSLKRLAGMRRSYNLEIKLLKDPNTKAHYNLEKSQKDSRYATLQSRFDAAKAS-GESTRDELFGGRRDVESGEAQGKSAEAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKFIQCFGCLNVSAMVAIIVYVVVQQVELPG 228
            GDVKYWDTSYGK LD+L   +  ++  S   +E  I+ A+++++RL GM+RSYNLEIKL++D   KA Y  EK+ KD++   L+++ + AK     S +  LF GR    + E + K+A+ KL +A+  Q+KTEA YKN+I VL++TE     TA  L  QR Q++ ITE+V E+D +LTRA++L+ VFS+R+ TDK IQCF  +NV+A+VAIIVYVV++ V LPG
Sbjct:    2 GDVKYWDTSYGKALDELSDQVKAVKGASAAEKEAKIATATQTVRRLQGMKRSYNLEIKLMRDATQKASYQEEKNAKDAKLTELEAQLEEAKNKPAGSDKVSLFSGRA---AEEPKVKTADQKLDQAEIIQNKTEAKYKNIITVLEQTEEVGSATAATLQEQRAQISEITENVMEMDGMLTRANKLIMVFSRRLATDKMIQCFAFINVAALVAIIVYVVIKNVGLPG 224          
BLAST of mRNA_Ecto-sp13_S_contig1843.5741.1 vs. uniprot
Match: A0A835Z325_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z325_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.730e-43
Identity = 104/239 (43.51%), Postives = 145/239 (60.67%), Query Frame = 0
Query:    4 GDVKYWDTSYGKTLDQLDGFISTM-ESGSGDAREDAISEASRSLKRLAGMRRSYNLEIKLLKDPNTKAHYNLEKSQKDSRYATLQSRFDAA--KASGESTRDELFGGRRDVESGEAQGKSAEAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKFIQCFGCLNVSAMVAIIVYVVVQQVELPG-GDDNDVPDPA 238
            GD+++WD +YG  LD L+  +  + E+ +   R+   S A+ +++RL G++RSYNLEIKL +D   KA Y   K+ KD+R   L+++ + A  K   E+ R  LF GR  +E   A    A+AKL +A   QDKTEA YKNM+ VL +TE      A  L +QR Q+  I EDV  +   LTRA +L+ VF KR+ TDKFIQCFG +NV+ +V II+YVV+ +  L   G  N  P PA
Sbjct:    2 GDLQFWDGNYGNVLDGLESQLHQVREAYTPSDRDQLASTAASTVRRLQGIKRSYNLEIKLTRDTGLKAMYTDAKAAKDARLEQLEAQLEEARRKPGREAERAALFDGRA-IEMAPA----ADAKLDQASAIQDKTEARYKNMVTVLAQTEEIGTAAAASLADQRTQMVAIDEDVKVMHENLTRAGKLLHVFGKRLATDKFIQCFGFVNVALLVGIILYVVITKTGLSSSGASNPPPTPA 235          
BLAST of mRNA_Ecto-sp13_S_contig1843.5741.1 vs. uniprot
Match: W7TW41_9STRA (Soluble nsf attachment protein receptor n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW41_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.230e-26
Identity = 76/236 (32.20%), Postives = 135/236 (57.20%), Query Frame = 0
Query:    5 DVKYWDTSYGKTLDQLDGFISTMESGSGDAREDAISEASRSLKRLAGMRRSYNLEIKLLKDPNTKAHYNLEKSQK-DSRYATLQSRFDAAKASGESTRDELFGGRRDVESGEAQGKSA--EAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKFIQCFGCLNVSAMVAIIVYVVVQQVELPGGDDNDVPDP 237
            D++YWD      L +L+  I  ++S  G  +E  I+++  +LKR+  +++ YN E+++    + + H   EK +  D R A L++    AK   E+ +  LF G +  +      ++A  +  LTEA + QDKTEA+ ++ +G+++ ++    NT  E+  Q+EQ+A IT+ V  ++  LTRAD+L++ F +R+ TDKFIQ F  LN   +V IIV+  V++ ++   + +  P P
Sbjct:    3 DIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKT--EANKKSLFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVRAPEIHAPPMP 236          
BLAST of mRNA_Ecto-sp13_S_contig1843.5741.1 vs. uniprot
Match: A0A7S2V573_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V573_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.230e-25
Identity = 77/235 (32.77%), Postives = 121/235 (51.49%), Query Frame = 0
Query:    6 VKYWDTSYGKTLDQLDGFISTMESGSGDAREDAISEASRSLKRLAGMRRSYNLEIKLLKDPNTKAHYNLEKSQKDSRYATLQSRFDAAKASGESTRDELFGGRRDVESGEAQGKSAE---AKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKFIQCFGCLNVSAMVAIIVYVVVQQVELPGGDDNDVPDP 237
            ++YWD      +DQ +     ++  +  A E A  E    L+   G+++S+  E++LL D   + HY ++  + + R + L  R + ++ + E  ++ L  G +    G   G S +   A L +A++ QD  E AY      L E    A  T  EL NQRE++  ITE    ID LLTRADRL++ F +RM TD+ IQ F  +N   ++A+I+Y +V    L GG  +  PDP
Sbjct:    1 MEYWDERINSLIDQGEREAEKLDMDNETAME-ACQEIEHCLQSAKGVKQSFTTELRLLGDKVEEQHYKMKLRRYEERMSALTERLNGSREAIE--KEHLMRGAQQRRGGGGFGDSDDPNDAMLGKAEKLQDDIEDAYGRAENDLDEIRQLAPETLAELRNQREKIQDITETAERIDDLLTRADRLLRTFGRRMATDRLIQVFFFINACLLLAVIIYAIVSDSNLTGGSGSKAPDP 232          
BLAST of mRNA_Ecto-sp13_S_contig1843.5741.1 vs. uniprot
Match: B8BZJ7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZJ7_THAPS)

HSP 1 Score: 104 bits (260), Expect = 8.910e-24
Identity = 67/213 (31.46%), Postives = 113/213 (53.05%), Query Frame = 0
Query:   35 REDAISEASRSLKRLAGMRRSYNLEIKLLKDPNTKAHYNLEKSQKDSRYATLQSRFDAAKASGESTRDELFGGRRDVES------GEAQGKSA-EAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKFIQCFGCLNVSAMVAIIVYVVVQQVELPGGDDNDVPDPAAG 240
            +   +  A + L+   G ++SY +E +L+ DPN K  Y  + S+     ++  +   A K  G   R ELF G R   S      GE  G+ A ++ L++ +  QDKT+ +  N   ++  ++   + T  EL  QREQ+  +  +   I+  L RAD+L+K F KRM TD+FIQCF C+N+  +V +++Y ++++  L GG++   P    G
Sbjct:    3 KASTLDRAEKKLRAANGTKKSYKMETRLVADPNQKRMYENKLSRLSEELSSCANDLKAMK--GGMQRGELFVGARGKSSRGGGEYGEMSGEEAGDSMLSDMNNIQDKTKNSLANTKHMVAASKEVGEATMEELLRQREQIRNVDNEAMRIEDNLQRADKLIKTFGKRMATDRFIQCFACINILLLVGVVIYTILKKGSLTGGENEGAPASPVG 213          
BLAST of mRNA_Ecto-sp13_S_contig1843.5741.1 vs. uniprot
Match: A0A7S4A3K9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3K9_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.470e-23
Identity = 76/230 (33.04%), Postives = 121/230 (52.61%), Query Frame = 0
Query:    3 SGDVKYWDTSYGKTLDQLDGFISTMESGSGDAREDAISEASRSLKRLAGMRRSYNLEIKLLKDPNTKAHYNLEKSQKDSRYATLQSRFDAAKASGESTRDELFGGRRDVESGEAQGKSAEAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKFIQCFGCLNVSAMVAIIVYVVVQQVELPGGDDN 232
            S D+ YW  SY  ++D  D  ++++ +   D R   I  A   LKR  G+++SY LE++LL+D   K +Y     + D R   L+ R +  +   E  R  L    ++  +   + K  +  L +A   QDKTE   +    +++ ++    +T  EL  Q++Q+  ++ D+  I+  L+RADRL++ F+KRMMTDK I  F  LN+ A+  IIVY VV    L  GDD 
Sbjct:   60 STDIDYWSDSYRSSIDDADRLVTSLGACEPDERLSIIDAADAKLKRAGGIKKSYKLELRLLRDRELKRNYEESLRELDDRRDELKRRVEEHRERTE--RSTLL---QETPAAFGEHKGNDYYLDKAHSLQDKTENTLERTTQMIEASKEVGASTLSELERQQDQIKDVSADIMLIEDNLSRADRLIRNFTKRMMTDKLIMGFAFLNMCALTGIIVYCVVTGKVL--GDDK 282          
BLAST of mRNA_Ecto-sp13_S_contig1843.5741.1 vs. uniprot
Match: A0A7S2P5B9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P5B9_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.920e-22
Identity = 64/230 (27.83%), Postives = 117/230 (50.87%), Query Frame = 0
Query:    5 DVKYWDTSYGKTLDQLDGFISTMESGSGDAREDAISEASRSLKRLAGMRRSYNLEIKLLKDPNTKAHYNLEKSQKDSRYATLQSRFDAAKASGESTRDELFGGRRDVESGEAQGKSAEAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKFIQCFGCLNVSAMVAIIVYVVVQQVELPGGDDNDV 234
            D++YW+ +  + ++ L   +  + + +G  ++    EA + L+   G +RSY LE++++K+   +  Y  +    +++   L       K+S  +T+D L  G    ++G    +  +A + EA   QDKT+ +      ++ E++    NT   L  QR Q+ RI          L RAD L+K FSKRM  DKFIQC  C+N+S  + +I++++ +      GDD+ +
Sbjct:    3 DIEYWEETLKEEIEDLSTVLGLVVAQTGSKQKQKFDEADKKLRDANGTKRSYKLEMRVIKNATQRKMYEKQLKDHETKLKALADHLKNLKSS--ATKDTLLEG---ADTGRTPEQEGDAMMNEARNTQDKTQTSLDRTKQLVAESKDIGQNTLATLEEQRAQIERIDAHADRTMENLGRADLLIKNFSKRMANDKFIQCCACINISLFIGVILFLIFKNRSDDDGDDSSI 227          
BLAST of mRNA_Ecto-sp13_S_contig1843.5741.1 vs. uniprot
Match: A0A7S1FMQ8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMQ8_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.910e-21
Identity = 69/224 (30.80%), Postives = 115/224 (51.34%), Query Frame = 0
Query:    4 GDVKYWDTSYGKTLDQLDGFISTME---SGSGDAREDAISEASRSLKRLAGMRRSYNLEIKLLKD-PNTKAHYNLEKSQKDSRYATLQSRFDAAKASGESTRDELFGGRRDVESGEAQGKSAEAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKFIQCFGCLNVSAMVAIIVYVVVQQ 223
            GD++YW  S+   L  L   I  ++        A + AI  A   LK+ + +++SY LE++L+   P  K  Y  +  + ++       + D AKA  +  R EL  G  +   G    +  +  L EA + QDKT+ +      ++ E++     T  EL  QR Q+ R+T+DV  I+  L RA++L+K F +RM TDKFIQCF C+N+  ++ ++ ++   Q
Sbjct:    2 GDIEYWRDSFQSELSTLPEIIRDIDRVRKKGPYAIQSAIRNAEDQLKKCSNIQKSYKLELRLMVGMPVEKKKYENDLQELENELRECNDKLDDAKARAQ--RSELMSGANNE--GPDPERDGDQMLMEAGKIQDKTKESLMTTQNLIHESKEVGVTTLEELNRQRNQIVRVTDDVMAIEGELARAEKLIKTFGRRMATDKFIQCFTCVNILLLLGVVCFIFFVQ 221          
BLAST of mRNA_Ecto-sp13_S_contig1843.5741.1 vs. uniprot
Match: F0YJK0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJK0_AURAN)

HSP 1 Score: 91.7 bits (226), Expect = 1.930e-18
Identity = 75/221 (33.94%), Postives = 109/221 (49.32%), Query Frame = 0
Query:   17 LDQLDGFISTMESGSGDAREDAISEASRSLKRLAGMRRSYNLEIKLLKDPNTKAHYNLEKSQKDSRYATLQSRFDAAKASGESTRDELFGGRRDVESGEAQGKSAEAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKFIQCFGCLNVSAMVAIIVYVVVQQVEL-PGGDDNDVPD 236
            +D+L   +  +    GD R   +SE    L R   +RRSY LE++LL+D   K  Y  +    D+R   +  R D     G S R EL G         +  K     L +A + QD+T+ A    + +++ +     +   EL  Q+EQ   IT DV  I+  LTRAD+L++ F+KRMMTDK I CF  +N+  ++ I+VY VV    L   G   D PD
Sbjct:   60 VDELAAIVLLINGTVGDER---VSECDAKLCRAQSIRRSYCLEVRLLRDKAIKRTYEQKLKGLDTRCTEI--RHDIECTRGSSNRQELLG----APPAHSDFKGNANYLDDAGKIQDQTQDALSRTMHLVEASSEVGHSALNELERQQEQARDITTDVMIIEDNLTRADKLIRNFTKRMMTDKLIVCFAFVNMCGLIGIVVYCVVTGRGLGTEGQKEDRPD 271          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1843.5741.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5KVH9_9PHAE8.640e-15797.93t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835Z1V1_9STRA3.710e-5748.67Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A835Z325_9STRA1.730e-4343.51Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
W7TW41_9STRA1.230e-2632.20Soluble nsf attachment protein receptor n=2 Tax=Mo... [more]
A0A7S2V573_9STRA1.230e-2532.77Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
B8BZJ7_THAPS8.910e-2431.46Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S4A3K9_9STRA1.470e-2333.04Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A7S2P5B9_9STRA1.920e-2227.83Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1FMQ8_9STRA1.910e-2130.80Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
F0YJK0_AURAN1.930e-1833.94Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 146..166
NoneNo IPR availableGENE3D1.20.5.110coord: 120..199
e-value: 3.2E-13
score: 51.7
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 15..225
NoneNo IPR availablePANTHERPTHR21230:SF69coord: 15..225
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..221
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..199
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 222..241
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 120..189
NoneNo IPR availableTMHMMTMhelixcoord: 200..222
IPR005606Sec20PFAMPF03908Sec20coord: 146..222
e-value: 2.5E-6
score: 27.3
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 129..191
score: 8.638

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1843contigEcto-sp13_S_contig1843:7998..12443 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1843.5741.1mRNA_Ecto-sp13_S_contig1843.5741.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1843 7998..12473 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1843.5741.1 ID=prot_Ecto-sp13_S_contig1843.5741.1|Name=mRNA_Ecto-sp13_S_contig1843.5741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp
MASGDVKYWDTSYGKTLDQLDGFISTMESGSGDAREDAISEASRSLKRLA
GMRRSYNLEIKLLKDPNTKAHYNLEKSQKDSRYATLQSRFDAAKASGEST
RDELFGGRRDVESGEAQGKSAEAKLTEADQYQDKTEAAYKNMIGVLQETE
ATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKF
IQCFGCLNVSAMVAIIVYVVVQQVELPGGDDNDVPDPAAGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005606Sec20
IPR000727T_SNARE_dom