prot_Ecto-sp13_S_contig1843.5740.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1843.5740.1
Unique Nameprot_Ecto-sp13_S_contig1843.5740.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length876
Homology
BLAST of mRNA_Ecto-sp13_S_contig1843.5740.1 vs. uniprot
Match: A0A6H5LC29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC29_9PHAE)

HSP 1 Score: 1145 bits (2963), Expect = 0.000e+0
Identity = 743/921 (80.67%), Postives = 769/921 (83.50%), Query Frame = 0
Query:    1 PVLEGFLAFFRACFGEDILRDSEKSMVSVVERGDCRTTESVARYLEHGLRVCREEGVKPRDFSLLRGRSALTGERDDADLHVFCRTKGMATARSLCKISDCHGICADLVPPTVLNFLAPSSIDGGGFGGDGGCGDDGERRSSGLPEYSGPPWADVDTLTSKDAKVFQLWGLSGSVAPAFDHLVSQRTNRPVNRCLELGSGAGDLSNAIPDELARGATV-----------------------------------------KLEDGGQVVHVAGQRAVADKVFCAVAESLSEVVPDTVQVVDMKSTGAMRIMATSHAIQEMARAGGADVDEIKMFLVWLEKSLVVQMPGGNEGKLQAMCQVLRRAVRQWRAHNVSVELSPMLASKAAQRYGRNVVAGGVKDIRYRFVETLSEAVGVDLWLDGLELRGQVVDARGQASAQAKLETEMGKMSQDLGVATRLVGAEGLSVETAKNPIISSNVEVSQQEAQSPQEAVVKRAVLLAQANAHGVGGFPTHKEEKVDDGDAAXXXXXXXAASTATPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTGRVLWRSPPRRNPAQVQEDETNGKQPDKRFEQQQDRNKQHQQ-----QDCHTPEPESIFRVTGSSAVDPPQSTLSHNEATNTVKIVAVGSQNRASAPAARNDAAVPWRSTALVRGGRGGDRGXXMKXXXAVQRRRGGYLRPAVQQKPGGLPLMAPLVPGVPAPHSGNSNIFRGGIGGTLQSYGGMHHHQEIVSRGQAVANGSFGGGQQQASFIQPTVGVPVVGQGGPQVVVQHHVXXXXXXXXXXFSVLQSPGDGAGESAHAGAASGGSAGYQATSHR 875
            PVLEGFLAFFRACFGEDI+RDSEKSMVSVVERGD RTTESVARYLEHGLRVCREEGVKP DFSLLR RSALTGE +DADLHVFCRTKGMATARSLCKISDCHGICADLVPPTVL F APSSIDGGG  GD  CG DGE+RSSGLPEYSGPPWADVDTLTSKD KVFQLWGLSGSVAPAFDHLVSQRTNRPVNRCLELGS AGDLSNA PD LARGATV                                         KLEDGGQVVHVAGQRAVADKVFCAVAESLSEVVPD +Q VDMKSTGAMRIMATSHA+QEMARAGGADVDE+KMFLVWLEK LVVQM GGNEGKLQAMC+VLR AVRQWRA NVSVELSPMLASKAAQRYGRNVVAGGVKDIRYRFVETLSEAVGVDLWLDG+ELRGQVVD  GQASAQAKLETEMGKMSQDLGVATRLVGAEGLSVE AKN  +SSNV+VSQQEAQSP EAVV+RAVLLAQ +AHGVGG  THKEEKVDDGDAA       AA+             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          AS GRVL+R PPRR PAQVQEDETN KQP KRFEQQQD            QDCH PEPE I RVTG  AVDPP+STLS N ATN   IVAVGSQ+RASA AARNDA VPWRST   R GRGG  G  MK   AVQRRRG YLRPAVQ++PGGL LM PL+PGVP P SGN+NIFRGGIG TLQS+ GMHHHQEIVSRG+AVANGSFGGGQQQ++F+QPTVGVPVVGQG PQVVVQHH XXXXXXXXX FSVLQSPGDGAG+SAHAGAAS GSAGYQATSHR
Sbjct:  429 PVLEGFLAFFRACFGEDIVRDSEKSMVSVVERGDYRTTESVARYLEHGLRVCREEGVKPCDFSLLRARSALTGETEDADLHVFCRTKGMATARSLCKISDCHGICADLVPPTVLKFSAPSSIDGGGDDGD--CGSDGEQRSSGLPEYSGPPWADVDTLTSKDVKVFQLWGLSGSVAPAFDHLVSQRTNRPVNRCLELGSSAGDLSNAFPDNLARGATVLFSCLRAAVEAATNARHVLLGPTVSLRLNLVAAPLNFGPKVKLEDGGQVVHVAGQRAVADKVFCAVAESLSEVVPDIIQAVDMKSTGAMRIMATSHAVQEMARAGGADVDEVKMFLVWLEKRLVVQMTGGNEGKLQAMCRVLRHAVRQWRAQNVSVELSPMLASKAAQRYGRNVVAGGVKDIRYRFVETLSEAVGVDLWLDGMELRGQVVDPCGQASAQAKLETEMGKMSQDLGVATRLVGAEGLSVEKAKNACVSSNVDVSQQEAQSPPEAVVERAVLLAQVSAHGVGGPLTHKEEKVDDGDAA-------AAAXXX----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPRSTTTAPASAGRVLFRPPPRRIPAQVQEDETNVKQPYKRFEQQQDXXXXXXXXXXXXQDCHAPEPEWISRVTGVGAVDPPRSTLSRNAATNNASIVAVGSQHRASASAARNDATVPWRSTTHFRDGRGGGEGGRMKSRGAVQRRRG-YLRPAVQREPGGLTLMGPLIPGVPVPDSGNNNIFRGGIGDTLQSHHGMHHHQEIVSRGEAVANGSFGGGQQQSTFMQPTVGVPVVGQGPPQVVVQHHXXXXXXXXXXHFSVLQSPGDGAGDSAHAGAASEGSAGYQATSHR 1329          
BLAST of mRNA_Ecto-sp13_S_contig1843.5740.1 vs. uniprot
Match: D8LJ16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ16_ECTSI)

HSP 1 Score: 725 bits (1871), Expect = 1.730e-250
Identity = 367/402 (91.29%), Postives = 376/402 (93.53%), Query Frame = 0
Query:    1 PVLEGFLAFFRACFGEDILRDSEKSMVSVVERGDCRTTESVARYLEHGLRVCREEGVKPRDFSLLRGRSALTGERDDADLHVFCRTKGMATARSLCKISDCHGICADLVPPTVLNFLAPSSIDGGGFGGDGGCGDDGERRSSGLPEYSGPPWADVDTLTSKDAKVFQLWGLSGSVAPAFDHLVSQRTNRPVNRCLELGSGAGDLSNAIPDELARGATVKLEDGGQVVHVAGQRAVADKVFCAVAESLSEVVPDTVQVVDMKSTGAMRIMATSHAIQEMARAGGADVDEIKMFLVWLEKSLVVQMPGGNEGKLQAMCQVLRRAVRQWRAHNVSVELSPMLASKAAQRYGRNVVAGGVKDIRYRFVETLSEAVGVDLWLDGLELRGQVVDARGQASAQAKLETE 402
            PVLE FLAFFRACFGEDI+RDSE S+VSVVERGDCRTTESVARYLEHGLRVCREEGVKP +FSLLR RSALTGE +DADLHV CRTKGMATARSLCKISDCHGICADLVPPTVLNF APSS+DGGG GG   CG DGERRS  LPEYSGPPWADVDTLTSKD KVFQLWGLSGSVAPAFDHLVSQRTNR VNRCLELGSGAGDLSNAIPD LA+GATVKLEDGGQVVHVAGQRAVADKVFCAVAESLSEVVPD +Q VDMKSTGAMRIMATSHA+QEMARAGGADVDEIKMFLVWLE SLVVQ+ GGNEGKLQAMCQVLR AVRQWRA NVSVELSPML SKAAQRYGRNVVAGGVKDIRYRFVETLSEAVGVDLWLDGLELRGQVVD  GQASAQAKLETE
Sbjct:  299 PVLESFLAFFRACFGEDIVRDSENSLVSVVERGDCRTTESVARYLEHGLRVCREEGVKPCEFSLLRARSALTGETEDADLHVLCRTKGMATARSLCKISDCHGICADLVPPTVLNFSAPSSVDGGGGGG---CGSDGERRSPDLPEYSGPPWADVDTLTSKDVKVFQLWGLSGSVAPAFDHLVSQRTNRSVNRCLELGSGAGDLSNAIPDNLAKGATVKLEDGGQVVHVAGQRAVADKVFCAVAESLSEVVPDVIQAVDMKSTGAMRIMATSHAVQEMARAGGADVDEIKMFLVWLENSLVVQITGGNEGKLQAMCQVLRHAVRQWRAQNVSVELSPMLVSKAAQRYGRNVVAGGVKDIRYRFVETLSEAVGVDLWLDGLELRGQVVDPCGQASAQAKLETE 697          
BLAST of mRNA_Ecto-sp13_S_contig1843.5740.1 vs. uniprot
Match: D7FTQ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ8_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 7.710e-41
Identity = 136/403 (33.75%), Postives = 194/403 (48.14%), Query Frame = 0
Query:    6 FLAFFRACFGEDILRDSEKSMVSVVERGDCRTTESVARYLEHGLRVCREEGVKPRDFSLLRGRSALTGERD-DADLHVFCRTKGMATARSLCKISDCHGICADLVPPTVLNFLAPSSIDGGGFGGDGGCGDDGERRSSGLPEYSGPPWADVDTLTSKDAKVFQLWGLSGSVAPAFDHLVSQRTNRPVNRCLELGS-GAGDLSNAIPDELARGATVKL--EDGGQVVHVAGQ-RAVADKVFCAVAESLSEVVPDTVQVVDMKSTGAMRIMATSHAIQEMARAGGADVDEIKMFLVWLEKSLVVQMP--GGNEGKLQAMCQVLRRAVRQWRAHNVSVELSPMLASKAAQRYGRNVVAGGVKDIRYRFVETLSEAVGVDLWLDGLELRGQVVDARGQASAQAKLET 401
            F  FFR  F   I     +S V +  + +       A   EHGLRVCR++ VK  DF LLR R  +   RD D   ++      +   R L  + D +G+  + VP   +   +                        GLPEY   P  D D  T    KV Q+WGL   V  AFD +V+   +  +   ++LGS GA +L         +G  VK   E G   V ++G+    AD     V +SL E +PD VQ VDMK TGAMR ++   AI E+A+A G D  ++++   W  K +++Q+   GG+ G +Q MC  L   V++WR   + V L+  +  KA +R+  +  AGG     + FV +LSE +G  LWLDG +L  +V D   + SAQAKLET
Sbjct: 1093 FSPFFRDHFDVTIRHVPLESAVYISGKAEDGVVHVAAECFEHGLRVCRDDEVKAADFLLLRAR--VRSARDPDGSQYLLPLEVSIKLRRRLRDLGDLYGVVINSVPARSVGLGSXXXXX---------------XXXXGLPEYLCCPGVDTDDNTQDHRKVVQIWGLRDCVVGAFDRVVASLLDN-MEYVVKLGSVGADELKRL----RFKGKNVKYFTEGGVTGVRISGRPHLFADANVSTVLQSLPERLPDKVQCVDMKYTGAMRALSRPWAIDEIAQASGIDQSQVRVTPQWQNKCMLLQVLKLGGDRGAIQGMCTFLEGRVKEWRGQRLVVTLTAEIIDKARKRFFSSGSAGGFHFSSF-FVASLSEEIGEHLWLDGFQLTARV-DPDDRDSAQAKLET 1471          
BLAST of mRNA_Ecto-sp13_S_contig1843.5740.1 vs. uniprot
Match: A0A6H5JR78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR78_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 4.770e-36
Identity = 131/411 (31.87%), Postives = 190/411 (46.23%), Query Frame = 0
Query:    6 FLAFFRACFGEDILRDSEKSMVSVVERGDCRTTESVARYLEHGLRVCREEGVKPRDFSLLRGRSALTGERDDADLHVFCRTKGMATARSLCKISDCHGICADLVPPTVLNFLAPSSIDGGGFGGDGGCGDDGERRSSGLPEYSGPPWADVDTLTSKDAKVFQLWGLSGSVAPAFDHLVSQRTNRPVNRCLELGSGAGDLSNAIPDELARGATVKLEDGGQVVHVAGQRAVADKVFCAVAESLSEVVPDTVQVVDMKSTGAMRIMATSHAIQEMARAGGADVDEIKMFLVWLEKSLVVQMP--GGNEGKLQAM-------------CQVLRRAVRQWRAHNVSVELSPMLASKAAQRYGRNVVAGGVKDIRYRFVETLSEAVGVDLWLDGLELRGQVVDARGQASAQAKLET 401
            FL FFR  F   I     +S V + +  D       A   EHGLR+CR+  VK  DF LLR R   T + D +  ++          R L  + D +G+        V+N + PS  +G G G               LP+Y   P  D +  T    KV Q+WGL   V  AFD +V+   +      ++LG    D    +  +  +      E G   V ++G+  +AD     V +S+ EV+PD VQ VDMK TGAMR  +   AI E+ARA G D  ++++   W  K +++Q+   GG+ G +Q M             C  L   V++WR   + V L+  +  KA + +  +  AG      + FV +LSE +G DLWLDG +L  +  D   + SAQAKLET
Sbjct: 1222 FLPFFRDHFDVTIRNVPSESAVCIGKAPD-GVVNVAAECFEHGLRLCRDNDVKAADFLLLRARVRSTRDPDGSQ-YLLPLEVSAKLRRKLRDLGDRYGV--------VINGV-PSRSEGLGSGXX-------XXXXXXLPKYVCCPRVDTEDNTQDHRKVVQIWGLRNCVVGAFDRVVASLLDN-TEYVVKLGPVGADELKGLRFK-GKNVNCFTEGGVTEVRISGRPHLADANISTVLQSMPEVLPDQVQCVDMKCTGAMRAFSRPWAIDEIARASGIDQSQVRVTPQWQNKCMLLQVLKLGGDRGAIQGMSAYLNLKGLNEIRCTFLEGRVKEWRGRRLVVTLTAEIIDKARKCFFSSGSAGEFHFCSF-FVASLSEEIGEDLWLDGFQLTARA-DPDDRDSAQAKLET 1610          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1843.5740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5LC29_9PHAE0.000e+080.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ16_ECTSI1.730e-25091.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTQ8_ECTSI7.710e-4133.75Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JR78_9PHAE4.770e-3631.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1843contigEcto-sp13_S_contig1843:200..4581 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1843.5740.1mRNA_Ecto-sp13_S_contig1843.5740.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1843 200..4581 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1843.5740.1 ID=prot_Ecto-sp13_S_contig1843.5740.1|Name=mRNA_Ecto-sp13_S_contig1843.5740.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=876bp
PVLEGFLAFFRACFGEDILRDSEKSMVSVVERGDCRTTESVARYLEHGLR
VCREEGVKPRDFSLLRGRSALTGERDDADLHVFCRTKGMATARSLCKISD
CHGICADLVPPTVLNFLAPSSIDGGGFGGDGGCGDDGERRSSGLPEYSGP
PWADVDTLTSKDAKVFQLWGLSGSVAPAFDHLVSQRTNRPVNRCLELGSG
AGDLSNAIPDELARGATVKLEDGGQVVHVAGQRAVADKVFCAVAESLSEV
VPDTVQVVDMKSTGAMRIMATSHAIQEMARAGGADVDEIKMFLVWLEKSL
VVQMPGGNEGKLQAMCQVLRRAVRQWRAHNVSVELSPMLASKAAQRYGRN
VVAGGVKDIRYRFVETLSEAVGVDLWLDGLELRGQVVDARGQASAQAKLE
TEMGKMSQDLGVATRLVGAEGLSVETAKNPIISSNVEVSQQEAQSPQEAV
VKRAVLLAQANAHGVGGFPTHKEEKVDDGDAAAAAAATTAASTATPAAAP
STAASCAPSAVAPSAPSAGPSAVASTAASTTPSAAASVAATTPSTAAGAA
SSAASSAASSAASSAASSAASSAASSAAQSTTPHAAPSAALPRSTTAAPA
STGRVLWRSPPRRNPAQVQEDETNGKQPDKRFEQQQDRNKQHQQQDCHTP
EPESIFRVTGSSAVDPPQSTLSHNEATNTVKIVAVGSQNRASAPAARNDA
AVPWRSTALVRGGRGGDRGGRMKSRGAVQRRRGGYLRPAVQQKPGGLPLM
APLVPGVPAPHSGNSNIFRGGIGGTLQSYGGMHHHQEIVSRGQAVANGSF
GGGQQQASFIQPTVGVPVVGQGGPQVVVQHHVHHHYVHHQHHFSVLQSPG
DGAGESAHAGAASGGSAGYQATSHR*
back to top