mRNA_Ecto-sp13_S_contig18417.5731.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18417.5731.1
Unique NamemRNA_Ecto-sp13_S_contig18417.5731.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig18417.5731.1 vs. uniprot
Match: A0A6H5JMT3_9PHAE (THUMP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMT3_9PHAE)

HSP 1 Score: 771 bits (1991), Expect = 1.890e-275
Identity = 382/395 (96.71%), Postives = 383/395 (96.96%), Query Frame = 1
Query:    1 GDQAVGYKAILWLRTAHRVLELVGEGGSPLGAPIDGGEALYGAAAAVPWSRYMEQGQTLCVDAILGVVPDGLTHSHFTALTVKNAVVDQLRDDGKRPSVDTENADLPLVVYLDRGRALLYRSLSGTRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQGDWWGTLADPMCGSGTLVIEAALIALRRAPGLVAMGAYGGGSRAKAAGWKPAVTAWPDFNPVLWRETVGEALQLQRAKPPAAIMGNDWHHGALSLAWRDAKAAGVEDCITLFDEDVERWRPPASVGLAVTNPPWDYRLDQGAEKSWLGLLEFLRREVAEKDAWVLSGNPALSRTLRMKSEQNMYLSTGGVELRWLKYHLNEYRGDRGRKGGGTGGPRPKKVPRKHDRPAIDRW 1185
            GDQAVGYKAILWLRTAHRVLELVGE GSPLGAPIDGGEALYGAAAAVPWSRYMEQGQTLCVDAILGVVPDGLTHSHFTALTVKNAVVDQLRDDGKRPSVDTENADLPLVVYLDRGRALLYRSLSGTRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQ      LADPMCGSGTLVIEAALIALRRAPGLVAMGAYGGG RAKAAGWKPAVTAWPDF+PVLWRETVGEALQLQRAKPPAAIMGNDWHHGALSLAWRDAKAAGVEDCITLFDEDV RWRPP SVGLAVTNPPWDYRLDQGAEKSWLGLLEFLRREVAEKDAWVLSGNPALSRTLRMKSEQNMYLSTGGVELRWLKYHLNEYRGDRGRK GG GGPRPKKVPRKHDRPAIDRW
Sbjct:  308 GDQAVGYKAILWLRTAHRVLELVGEEGSPLGAPIDGGEALYGAAAAVPWSRYMEQGQTLCVDAILGVVPDGLTHSHFTALTVKNAVVDQLRDDGKRPSVDTENADLPLVVYLDRGRALLYRSLSGTRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQ-----ALADPMCGSGTLVIEAALIALRRAPGLVAMGAYGGGGRAKAAGWKPAVTAWPDFDPVLWRETVGEALQLQRAKPPAAIMGNDWHHGALSLAWRDAKAAGVEDCITLFDEDVGRWRPPTSVGLAVTNPPWDYRLDQGAEKSWLGLLEFLRREVAEKDAWVLSGNPALSRTLRMKSEQNMYLSTGGVELRWLKYHLNEYRGDRGRKIGGRGGPRPKKVPRKHDRPAIDRW 697          
BLAST of mRNA_Ecto-sp13_S_contig18417.5731.1 vs. uniprot
Match: A0A836C9G3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9G3_9STRA)

HSP 1 Score: 416 bits (1070), Expect = 9.930e-135
Identity = 217/369 (58.81%), Postives = 256/369 (69.38%), Query Frame = 1
Query:    1 GDQAVGYKAILWLRTAHRVLELVGEGGSPLGAPIDGGEALYGAAAAVPWSRYMEQGQTLCVDAILGVVPDGLTHSHFTALTVKNAVVDQLRDD---GKRPSVDTENADLPLVVYLDRGRALLYRSLSGTRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQGDWWGTLADPMCGSGTLVIEAALIALRRAPGLVAMGAY-----GGGSRAKAAGWKPAVTAWPDFNPVLWRETVGEALQLQRAKPPAAIMGNDWHHGALSLAWRDAKAAGVEDCITLFDEDVERWRPPASVGLAVTNPPWDYRLDQGAEKSWLGLLEFLRREVAEKDAWVLSGNPALSRTLRMKSEQNMYLSTGGVELRWLKYHL 1083
            GD A GY+A+LWLRT HRV+EL+  G       +   E +Y  AA V WS YM+  QTL VDA+LG VP+GLTH+HFTALT+KNAVVDQ R     G RPSVDTE+ DLPLV+Y+D GRA+LYR LSG+RSMHKRGYR AMHAASLKENVAAGLLLASGWDP+TQ     +L DPMCGS TL IEAALIALRRAPGL AMG +     G G  AK   W P V  WPDF+   W+  V  A  + R   P  IM NDWH GALSLA  DA+ AGV  CI  F+ED  R+ PP++  + VTNPPWD RL  GA  SW  L +FL+       AW LSGN  ++R LRMK E++M+L+TGG +LRWL+Y +
Sbjct:  387 GDAAAGYRALLWLRTPHRVMELIARGEG-----VGDREGVYELAAGVRWSDYMDGRQTLQVDAVLGQVPEGLTHTHFTALTIKNAVVDQFRAASAAGVRPSVDTEDPDLPLVIYIDNGRAMLYRGLSGSRSMHKRGYRSAMHAASLKENVAAGLLLASGWDPDTQ-----SLCDPMCGSATLAIEAALIALRRAPGLQAMGYFSQREEGRGRGAKGGAWAPCVERWPDFDAAAWQHEVEAAAAMARDTAPTPIMANDWHEGALSLAHGDAERAGVAHCIQFFNEDARRFLPPSTPDVVVTNPPWDMRLG-GAADSWRALRQFLKSHCGGATAWALSGNQLVTRELRMKPERSMFLATGGAQLRWLQYSI 744          
BLAST of mRNA_Ecto-sp13_S_contig18417.5731.1 vs. uniprot
Match: A0A4D9D970_9STRA (THUMP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D970_9STRA)

HSP 1 Score: 268 bits (685), Expect = 1.880e-78
Identity = 163/372 (43.82%), Postives = 219/372 (58.87%), Query Frame = 1
Query:    1 GDQAVGYKAILWLRTAHRVLEL-VGEGGSPLGAPIDGGEALYGAAAAVPWSRYMEQGQTLCVDAILG--VVPDGLTHSHFTALTVKNAVVDQLRD--DGKRPSVDTENADLPLVVYLDRGRALLYRSLSGTRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQGDWWGTLADPMCGSGTLVIEAALIALRRAPGLVAMGAYGGGSRAKAAGWKPAVTA--WPDFNPVLWRETVGEALQLQRAKPPAAIMGNDWHHGALSLAWRDAKAAGVEDCITLFDEDVERWRPPASVG----LAVTNPPWDYRLDQGAEKSWLGLLEFLRREVAEKDAWVLSGNPALSRTLRMKSEQNMYLSTGGVELRWLKYHL 1083
            G +   Y+A+LW RTA+ V +L V + G      I   + LY     V W   M    ++ V  +LG   V   + H+HF++LTVKNA+VD  R+   G+RPSVD ++  LPLV++L R  A LYRSLSG  S+HKRGYR  MH +SL+E  AA +L+ +G+DPE        L DPMCGSGTL IEAAL+A R APGL+         R K  G    +T   WPD +  L R  V EA   +  + P  I+GNDWH  A+ LA RDA +AGV   I   ++DV   R   SV     L V NPPWD RL++GA +SW  L  FL+RE  E +A++LSGNP ++R LRMK+++ + +   G+ LR L+Y +
Sbjct:   78 GTEEAAYRALLWSRTANGVWQLMVRQRG------ICNRQDLYDMVRRVAWLEAMSVEDSVAVSCVLGGGEVATDIAHTHFSSLTVKNALVDSFRERSGGRRPSVDAKDPVLPLVLFLQRDEAWLYRSLSGPGSLHKRGYRQQMHKSSLRETTAAAVLMLAGYDPERH-----VLMDPMCGSGTLAIEAALMARRLAPGLM---------RLKREGDLAVLTPARWPDTDLALLRRLVREAKAQELERAPLPILGNDWHPAAVELAKRDAGSAGVFHDIIFSNQDVADHRLDGSVARKPNLVVCNPPWDLRLNEGARESWEALGRFLKREAGEAEAFLLSGNPDVTRALRMKAKRKIPIDQAGMSLRLLQYQV 429          
BLAST of mRNA_Ecto-sp13_S_contig18417.5731.1 vs. uniprot
Match: K8YNM9_NANGC (Rrna (Guanine-n-)-methyltransferase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YNM9_NANGC)

HSP 1 Score: 265 bits (677), Expect = 1.690e-75
Identity = 161/372 (43.28%), Postives = 217/372 (58.33%), Query Frame = 1
Query:    1 GDQAVGYKAILWLRTAHRVLEL-VGEGGSPLGAPIDGGEALYGAAAAVPWSRYMEQGQTLCVDAILG--VVPDGLTHSHFTALTVKNAVVDQLRD--DGKRPSVDTENADLPLVVYLDRGRALLYRSLSGTRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQGDWWGTLADPMCGSGTLVIEAALIALRRAPGLVAMGAYGGGSRAKAAGWKPAVTA--WPDFNPVLWRETVGEALQLQRAKPPAAIMGNDWHHGALSLAWRDAKAAGVEDCITLFDEDVERWRPPASVG----LAVTNPPWDYRLDQGAEKSWLGLLEFLRREVAEKDAWVLSGNPALSRTLRMKSEQNMYLSTGGVELRWLKYHL 1083
            G +   Y+A+LW RTA+ V +L V + G      I   + LY     + W   M    ++ V  +LG   V   + H+HF++LTVKNA+VD  R+   G+RPSVD ++  LPLV++L R  A LYRSLSG  S+HKRGYR  MH +SL+E  AA +L+ +G+DPE        L DPMCGSGTL IEAAL+A R APGL         +R K  G    +T   WPD +  L R  V EA   +  + P  I+GNDWH  A+ LA RDA +AGV   I    +D    R   SV     L V NPPWD RL++GA +SW  L  FL+RE    +A++LSGNP ++RTLRMK+++ + +   G+ LR L+Y +
Sbjct:   96 GTEEAAYRALLWSRTANGVWQLMVRQRG------ICNRKDLYDMVRRIAWLEAMSVEDSVAVSCVLGGGEVATDIAHTHFSSLTVKNALVDSFRERSGGRRPSVDAKDPVLPLVLFLQRDEAWLYRSLSGPGSLHKRGYRQQMHKSSLRETTAAAVLMLAGYDPERH-----VLMDPMCGSGTLAIEAALMARRLAPGL---------TRLKREGDLAVLTPARWPDTDLALLRRLVREAKAQELERAPLPILGNDWHPAAVELAKRDAGSAGVFHDIIFSSQDASDHRLDGSVARKPNLVVCNPPWDLRLNEGARESWEALGRFLKREAGGAEAFLLSGNPDVTRTLRMKAKRKIPIDQAGMSLRLLQYQV 447          
BLAST of mRNA_Ecto-sp13_S_contig18417.5731.1 vs. uniprot
Match: A0A7V8E3X5_9BACT (Putative N6-adenine-specific DNA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V8E3X5_9BACT)

HSP 1 Score: 248 bits (634), Expect = 1.050e-74
Identity = 158/379 (41.69%), Postives = 215/379 (56.73%), Query Frame = 1
Query:    1 GDQAVGYKAILWLRTAHRVLELVGEGGSPLGAPIDGGEALYGAAAAVPWSRYMEQGQTLCVDAILGVVPDGLTHSHFTALTVKNAVVDQLRDD-GKRPSVDTENADLPLVVYLDRGRALLYRSLSGTRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQGDWWGTLADPMCGSGTLVIEAALIALRRAPGLVAMGAYGGGSRAKAAGWKPAVTAWPDFNPVLWRETVGEALQLQRAKPPAAIMGNDWHHGALSLAWRDAKAAGVEDCITLFDEDVERWRPPASVGLAVTNPPWDYRLDQG--AEKSWLGLLEFLRREVAEKDAWVLSGNPALSRTLRMKSEQNMYLSTGGVELRWLKYHLNEYRGDRGRKGGGTG 1128
            GD +V  KA LWLRTA RV EL+ +G      P+ G   LY  AA V W ++++ G TL VDA   V    +THS F ALTVK+A+VD+LRD  G+RPSVDT++ DLPL + L R  ALLYR  +G  S+HKRGYR     + L E  AAG+L+ +GWD +T       LADPMCGS TL+IEAA+ A  RAPGL    A+                 W D +   W +   EA +  +A+ P A+MG D H GA++LA +   AA VE  +T+   D + W+P  +     TNPP+  RL +G   E+SW  L  FL R      A+VL GN AL++ L +++ +   +  G ++ R +KY + + R   G+ G G G
Sbjct:   43 GDASVARKACLWLRTAIRVQELLWKG------PVRGPRELYAGAAEVDWPKFLDPGFTLAVDA--SVRDSEITHSGFAALTVKDAIVDKLRDHFGERPSVDTQDPDLPLKLVLRRDEALLYRDWAGE-SLHKRGYRPIQVKSPLNEATAAGILMLAGWDRKTP------LADPMCGSATLLIEAAMWAAERAPGLNRRFAF---------------ERWLDLDEAAWGKERDEAKRRAKARLPFALMGADRHPGAVALARKSVVAAQVERLVTIEQADAKDWKPAVAPAAVFTNPPYGERLGEGDDLEESWKALGNFLHR-CEGATAFVLCGNSALTKFLGLRAAKKWPVMNGPIDCRLVKYEIGKGRRGLGKDGTGMG 390          
BLAST of mRNA_Ecto-sp13_S_contig18417.5731.1 vs. uniprot
Match: A0A7S4E978_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E978_9STRA)

HSP 1 Score: 248 bits (634), Expect = 1.690e-73
Identity = 157/367 (42.78%), Postives = 211/367 (57.49%), Query Frame = 1
Query:    1 GDQAVGYKAILWLRTAHRVLELVGEGGSPLGAPIDGGEALYGAAAAVPWSRYMEQGQTLCVDAIL-GVVPDGLTHSHFTALTVKNAVVDQLRDD---GKRPSVDTENADLPLVVYLDRGRALLYRSLSGTRSMHKRGYRD-AMHAASLKENVAAGLLLASGWDPET-QGDWWGTLADPMCGSGTLVIEAALIALRRAPGLVAMGAYGGGSRAKAAGWKPAVTAWPDFNPVLWRETVGEALQLQRAKPPAAIMGNDWHHGALSLAWRDAKAAGVEDCITLFDEDVERWRPPASVGLAVTNPPWDYRLDQGAEKSWLGLLEFLRREVAEKDAWVLSGNPALSRTLRMKSEQNMYLSTGGVELRWLKYHL 1083
            GD  VGY A++  RTA +VLE++          ++    LY     VPW   M+   TL VDA L G V   L HSHF++LT+KNAVVD  R +   G+RPSV  +  D+PL ++LDR R  LYRSLS + S+HKRGYR    H A+L+  VAA +L  + W   + +G+    L DPMCGSGT +IEAAL+A + APGL          RA++ G+  A   W DF+   W E + EA +  R   P+ IMG D H GA  LA      AGVED +T+   D   W P +   L ++NPPWD RL+ GA+ +W  L  FL+RE     A +L+GN  ++R L M++ +   LSTGGV+LR L Y +
Sbjct:  100 GDTRVGYAALIHARTATKVLEVLAWRNG-----VETAADLYNLGRDVPWPELMDVEGTLRVDATLTGGVAQALAHSHFSSLTLKNAVVDSFRGENQLGRRPSVAKDGCDVPLHLFLDRDRCTLYRSLS-SESLHKRGYRSRTSHRAALRPTVAAAMLYGARWPQRSMRGE---ALCDPMCGSGTFLIEAALMARQIAPGL---------QRAESEGF--ACERWKDFDGDAWDEVIREARERVRDTCPSKIMGADAHAGAAGLARDGIANAGVEDDVTIQVADCLAWTPESKPSLVISNPPWDGRLE-GADAAWTALRSFLKREAGGGVAHLLTGNMPVTRNLMMRASKKKKLSTGGVDLRCLTYEI 445          
BLAST of mRNA_Ecto-sp13_S_contig18417.5731.1 vs. uniprot
Match: F0Y4Q0_AURAN (THUMP domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4Q0_AURAN)

HSP 1 Score: 245 bits (625), Expect = 2.510e-73
Identity = 157/366 (42.90%), Postives = 208/366 (56.83%), Query Frame = 1
Query:    1 GDQAVGYKAILWLRTAHRVLELVGEGGSPLGAPIDGGEALYGAAAAVPWSRYMEQGQTLCVDAILGVVPDG-LTHSHFTALTVKNAVVDQLRDD---GKRPSVDTENADLPLVVYLDRGRALLYRSLSGTRSMHKRGYR-DAMHAASLKENVAAGLLLASGWDPETQGDWWGTLADPMCGSGTLVIEAALIALRRAPGLVAMGAYGGGSRAKAAGWKPAVTAWPDFNPVLWRETVGEALQLQRAKPPAAIMGNDWHHGALSLAWRDAKAAGVEDCITLFDEDVERWRPPASVGLAVTNPPWDYRLDQGAEKSWLGLLEFLRREVAEKDAWVLSGNPALSRTLRMKSEQNMYLSTGGVELRWLKYHL 1083
            GD  V  +A L  RTA +V+EL+        A ++  + LY  A  VPW   M    TL VD  LG  P   LTHSHF++LTVKNA+VD  R     G RPSVDT+  D+P+ +Y+D   A LYR+++ + S+HKRGYR D  H A+L+  VAAGLL  + W  +        L DPMCGSGTL +EAAL+A   APGL+  G +G       A  + A T W DF+   W   +G AL     + PA I+ +D H GAL LA   A+ A V+  +     D       A+  + V+NPPWD RLD GAE++W  L  FLRRE     A  L+GN A++R LRM++     L +GGV+LR+LKY +
Sbjct:   40 GDMGVLLRAGLEARTATKVMELLA-----CEAGVETAQDLYDVARNVPWDALMRVDGTLRVDTTLGRAPSAALTHSHFSSLTVKNAIVDSFRAGNRLGSRPSVDTKACDVPVHLYVDYDEARLYRAVA-SESLHKRGYRGDVAHKAALRTTVAAGLLYLADWPAKAAAG--AVLCDPMCGSGTLPVEAALMARDVAPGLIRAG-FGPAGPPSEAPLRFACTTWLDFDGDAWDAALGAALGRALPRAPAQILASDAHDGALRLAKDGARRASVDRDVVFARGDAATLALGATPDVVVSNPPWDGRLD-GAEEAWDALGSFLRREAPGATAHALTGNMAVTRNLRMRASSKRKLVSGGVDLRFLKYEV 395          
BLAST of mRNA_Ecto-sp13_S_contig18417.5731.1 vs. uniprot
Match: A0A0M0JYH3_9EUKA (Rrna (Guanine-n-)-methyltransferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JYH3_9EUKA)

HSP 1 Score: 247 bits (631), Expect = 2.950e-73
Identity = 141/294 (47.96%), Postives = 178/294 (60.54%), Query Frame = 1
Query:  211 GLTHSHFTALTVKNAVVDQLRD-DGKRPSVDTENADLPLVVYLDRGRALLYRSLSGTRSMHKRGYR--DAMHAASLKENVAAGLLLASGWDPETQGDWWGTLADPMCGSGTLVIEAALIALRRAPGLVAMGAYGGGSRAKAAGWKPAVTAWPDFNPVLWRETVGEALQLQRAKPPAAIMGNDWHHGALSLAWRDAKAAGVEDCITLFDEDVERWRPPASVGLAVTNPPWDYRLDQGAEKSWLGLLEFLRREVAEKDAWVLSGNPALSRTLRMKSEQNMYLSTGGVELRWLKYHL 1083
            GL HSHFTALTVKNAV D LR+  G RPSVD E+ADLPL +Y+  G A LYR LSG  SMHKRGYR   A+HAA+L+E +AA +LL + + P  Q      L DPMCGSGT+ IEAALIA   APGL+                 PA+T WPD +P  WR    EA + +R + P AI+ ND   G L+LA R A AAGV   I+    D   ++PP +  L +TNPPWD RL+ G E++W  L +FLRRE     AWVLSGN  L++ L M++   + +   G  L  + Y +
Sbjct:  106 GLAHSHFTALTVKNAVCDALRERHGWRPSVDPEDADLPLFLYVHNGEASLYRVLSGGASMHKRGYRAGQAVHAAALRETLAAAMLLHAEYAPSAQ-----VLCDPMCGSGTIPIEAALIATDTAPGLLRP--------------PPALTRWPDTSPSTWRSLTAEAREARRPRAPCAILANDLIRGNLALAERAASAAGVATSISFSAADAAAYQPPDAPQLVLTNPPWDIRLE-GGEEAWRSLGQFLRRECGGARAWVLSGNKELTQHLHMRASSRLRIENAGSSLALISYDV 379          
BLAST of mRNA_Ecto-sp13_S_contig18417.5731.1 vs. uniprot
Match: A0A7V3AFQ3_9BACT (RNA methyltransferase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V3AFQ3_9BACT)

HSP 1 Score: 238 bits (608), Expect = 5.200e-71
Identity = 149/359 (41.50%), Postives = 198/359 (55.15%), Query Frame = 1
Query:    1 GDQAVGYKAILWLRTAHRVLELVGEGGSPLGAPIDGGEALYGAAAAVPWSRYMEQGQTLCVDAILGVVPDGLTHSHFTALTVKNAVVDQLRDD-GKRPSVDTENADLPLVVYLDRGRALLYRSLSGTRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQGDWWGTLADPMCGSGTLVIEAALIALRRAPGLVAMGAYGGGSRAKAAGWKPAVTAWPDFNPVLWRETVGEALQLQRAKPPAAIMGNDWHHGALSLAWRDAKAAGVEDCITLFDEDVERWRPPASVGLAVTNPPWDYRLD-QGAEKSWLGLLEFLRREVAEKDAWVLSGNPALSRTLRMKSEQNMYLSTGGVELRWL 1071
            G +  GY+A LWLR+  RVLE +  G      P    E LY  A  + WS ++   QT  ++A   V    +THS + AL +K+A+ D  R   G RP VDTE ADLPL +Y+ R  A+LYR L+GT ++HKRGYRDA+H +SL E +AAG+LL + +D           ADPMCG+GT  IEAALIA RRAPGL+                +    +WPDF+  LW++  G A  + R + P AIM ND H GAL+LA +DA AAGV + I   + +V  + P   +GL   NPPW  RL     + +W  L  FLR   A  +  VL+GN  L   L +   +   L TG VE  W+
Sbjct:   43 GGRDAGYRACLWLRSGIRVLEEIARG------PASSPEELYEWAMTLDWSAWLTVKQTFSIEA--RVWDSQITHSKYAALRIKDALCDSFRRRCGSRPDVDTERADLPLFLYIYRDEAILYRDLAGT-TLHKRGYRDALHKSSLNEALAAGILLQAAYDGRV------AFADPMCGAGTFAIEAALIAARRAPGLLRQ--------------RFPFESWPDFDRQLWKDCRGRAYGMARYEVPKAIMANDRHSGALALAAKDAAAAGVGEYIRFSEAEVGAFAPEEPLGLVCVNPPWGKRLSGPDVKTAWRDLGRFLRERCAGANVSVLTGNRDLVGELGLVPAEMRPLRTGKVEC-WV 371          
BLAST of mRNA_Ecto-sp13_S_contig18417.5731.1 vs. uniprot
Match: A0A0G4HAJ2_9ALVE (THUMP domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HAJ2_9ALVE)

HSP 1 Score: 245 bits (625), Expect = 1.250e-70
Identity = 169/442 (38.24%), Postives = 225/442 (50.90%), Query Frame = 1
Query:    1 GDQAVGYKAILWLRTAHRVLELVGEGGSPLGAPIDGGEALYGAAA-AVPWSRYMEQGQTLCVDAILGV-VPDGLTHSHFTALTVKNAVVDQLRDD--GKRPSVDTENADLPLVVYLDRGRALLYRSLSGTRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQGDWWG-------TLADPMCGSGTLVIEAALIALRRAPGLVAM----GAYGG---GSRAKAAGWKPAVTAWPDFNPVLWRETVGEALQLQR----------AKPPAAIMGNDWHHGALSLAWRDAKAAGVEDCITLFDEDVERWRPPASVGLA----------VTNPPWDYRL---------------------------DQGAEK--------------SWLGLLEFLRREVAEKDAWVLSGNPALSRTLR--MKSEQNMYLSTGGVELRWLKYHL 1083
            GD   GY+A LWLR+A RVLE +  G  P     DG   LY  A     W+  +    T+  DA +G  VP  L+H+HF+ LT+KNA+VD  R +  G+RPSV+TE   LP+  YL +G A ++R LSG  ++HKRGYR  MH  +LKENVAAGLL  +GW  +    +          L DPMCGSGT+ IEAAL+A+RRAPGLV +    G + G   G   +          W DF  V +   V EA ++++               A +GNDWH GAL+LA RDAKAAGV D I   ++DV  WR   SVG A          VTNPPWD+RL                           + G+E+              SW+ L  F R E + +DAWVL+G+ +L   LR  M   +   LS  G +L + ++ +
Sbjct:  129 GDVETGYRACLWLRSASRVLESLTRGPQP----ADGPSELYNLARDCADWTGMIRVDDTVACDAKIGEGVPGRLSHNHFSGLTIKNAIVDAFRREYRGRRPSVETEAPVLPVSAYLHKGTAEVFRCLSGAAALHKRGYRQQMHRTALKENVAAGLLALAGWQEQVDRFYESGGMGESPLLCDPMCGSGTIAIEAALMAVRRAPGLVRLQRGRGQWDGRELGQETELCEAAYPFMLWNDFQSVTFHRVVREAEEVEKEARKVWREMNGPEGVAALGNDWHGGALTLARRDAKAAGVADLIRFTEDDVAHWR--LSVGSARGPCHLPSLFVTNPPWDHRLGIAVPRPERRREGEKEEKEGEEEALVNEGGSEEADVGSDLDSEEDLDSWVRLGSFFRSEASGRDAWVLTGDGSLFPRLRVQMGRRKPKQLSVSGAQLLFARFPI 564          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18417.5731.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMT3_9PHAE1.890e-27596.71THUMP domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836C9G3_9STRA9.930e-13558.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D970_9STRA1.880e-7843.82THUMP domain-containing protein n=2 Tax=Monodopsid... [more]
K8YNM9_NANGC1.690e-7543.28Rrna (Guanine-n-)-methyltransferase n=1 Tax=Nannoc... [more]
A0A7V8E3X5_9BACT1.050e-7441.69Putative N6-adenine-specific DNA n=1 Tax=Planctomy... [more]
A0A7S4E978_9STRA1.690e-7342.78Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
F0Y4Q0_AURAN2.510e-7342.90THUMP domain-containing protein (Fragment) n=1 Tax... [more]
A0A0M0JYH3_9EUKA2.950e-7347.96Rrna (Guanine-n-)-methyltransferase n=1 Tax=Chryso... [more]
A0A7V3AFQ3_9BACT5.200e-7141.50RNA methyltransferase n=1 Tax=Planctomycetes bacte... [more]
A0A0G4HAJ2_9ALVE1.250e-7038.24THUMP domain-containing protein n=1 Tax=Chromera v... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18417contigEcto-sp13_S_contig18417:1..3146 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score672.2
Seed ortholog evalue1.3e-190
Seed eggNOG ortholog2880.D7FT13
Model size1373
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.Putative RNA methylase family UPF0020
EggNOG OGs2QTIB@2759,COG0116@1
Cds size1032
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18417.5731.1prot_Ecto-sp13_S_contig18417.5731.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18417 550..2961 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462946.7410765-UTR-Ecto-sp13_S_contig18417:0..531681462946.7410765-UTR-Ecto-sp13_S_contig18417:0..53Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig18417 1..53 +
1681462946.752025-UTR-Ecto-sp13_S_contig18417:446..5491681462946.752025-UTR-Ecto-sp13_S_contig18417:446..549Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig18417 447..549 +
1681462946.8122387-UTR-Ecto-sp13_S_contig18417:2961..31461681462946.8122387-UTR-Ecto-sp13_S_contig18417:2961..3146Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig18417 2962..3146 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462946.7698104-CDS-Ecto-sp13_S_contig18417:549..6421681462946.7698104-CDS-Ecto-sp13_S_contig18417:549..642Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18417 550..642 +
1681462946.7821665-CDS-Ecto-sp13_S_contig18417:939..11921681462946.7821665-CDS-Ecto-sp13_S_contig18417:939..1192Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18417 940..1192 +
1681462946.7929265-CDS-Ecto-sp13_S_contig18417:1538..18131681462946.7929265-CDS-Ecto-sp13_S_contig18417:1538..1813Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18417 1539..1813 +
1681462946.803124-CDS-Ecto-sp13_S_contig18417:2550..29611681462946.803124-CDS-Ecto-sp13_S_contig18417:2550..2961Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18417 2551..2961 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18417.5731.1

>prot_Ecto-sp13_S_contig18417.5731.1 ID=prot_Ecto-sp13_S_contig18417.5731.1|Name=mRNA_Ecto-sp13_S_contig18417.5731.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=344bp
MEQGQTLCVDAILGVVPDGLTHSHFTALTVKNAVVDQLRDDGKRPSVDTE
NADLPLVVYLDRGRALLYRSLSGTRSMHKRGYRDAMHAASLKENVAAGLL
LASGWDPETQGDWWGTLADPMCGSGTLVIEAALIALRRAPGLVAMGAYGG
GSRAKAAGWKPAVTAWPDFNPVLWRETVGEALQLQRAKPPAAIMGNDWHH
GALSLAWRDAKAAGVEDCITLFDEDVERWRPPASVGLAVTNPPWDYRLDQ
GAEKSWLGLLEFLRREVAEKDAWVLSGNPALSRTLRMKSEQNMYLSTGGV
ELRWLKYHLNEYRGDRGRKGGGTGGPRPKKVPRKHDRPAIDRW*
back to top

mRNA from alignment at Ecto-sp13_S_contig18417:1..3146+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18417.5731.1 ID=mRNA_Ecto-sp13_S_contig18417.5731.1|Name=mRNA_Ecto-sp13_S_contig18417.5731.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3146bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18417:1..3146+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGAGACCAAGCGGTGGGCTACAAGGCCATCCTCTGGCTTCGCACCGCCCA CCGGTGAGACAGGCTTCCCTGCTTGGCTCTCGCGCGGAGATGGCGATAGA CGAAGGGCTGTCTACATAGATACGCAGGATTGAGTTGGACACAAGCCTCG ACATTCAAGAAGCAAAGATGTTTCTCGAGTGTGCTTACTCATCAGTCACT GCTTTGCTACTATTGGAGTTTGTTTGTAGGGCCCTTGAGCTTGTTGGGGC CCCCGCACGCACGCCCCCAACCCTTTTGCACAGCCGTCAACAAATGCGAA CCTCATTCTGGGGCGCATCTTAAACAAGCGGTGCCAAATACTTGTCCTTT TGGATACCTGCTACGGAACGTACAGGCTGCACAGTTTTGGCGCTGCTAAA TTTTGTTTTGTGTCTCTCCAACAACCTTCGAAACGTGTCTGCACAGGGTC CTGGAGCTTGTCGGCGAGGGGGGTAGCCCCCTTGGGGCGCCCATCGACGG TGGGGAGGCGCTGTACGGGGCGGCTGCGGCCGTGCCTTGGTCGCGCTACA TGGAACAAGGGCAGACTTTGTGCGTCGATGCCATTCTGGGGGTGGTACCT GACGGATTGACGCACTCGCATTTCACCGCTCTCACGGTTAAGGTATAGTC GTGTCTTTCCCTTTTTGTCTATTTCCTGGGTTGTAGATGTGGACGGCCAT GTGGTGTTTCGCAGATGGCGGCAGTACACCTTTTTTTTTTTGCTTGGTCT GTTGTCGCACCTTTTTGCTTGGGTGTGGCCCCCAGTGTGTCCATTGAAGC TTCCGTCTAGTAAACACCCTAGGCAAGGTTTGGGTAGGATGTTCCATCCC TGCTGAAATTTTGCGATCCTTCGCCTTGCCCTCGGCACCACCACCTTGAC CGTCCGCCGTACCCTGCGAAACCGAATCCGAAACGACAGAACGCGGTGGT CGACCAGCTTCGAGACGACGGCAAGCGGCCCTCCGTCGACACGGAGAACG CGGATCTCCCCTTGGTGGTCTACCTCGACCGTGGCCGGGCCCTCCTGTAC CGCAGCCTTAGCGGCACTCGCTCGATGCATAAGAGGGGGTACCGCGACGC AATGCACGCGGCCTCTCTCAAGGAGAATGTCGCCGCAGGGCTCCTCCTAG CCAGCGGGTGGGACCCTGAGACGCAAGGTGATTGGTGGGGAAGTGTTTGG AACCTTTTTCAGTAGCGTCGTGGGTGGACTCGGATATACGAGTAGATTGG TGGCCGTGGTTGGTACATTTTTCTAGCATTGTTCCGGGTGGTACCCAGAT ATTCGAGCAGATTCGGTGGGCGTAGGTGGTGTCTCTTCTTTCAGTGTAAA AAGTCGTTGGCCTTTTATCCACCTCTTGTTAATCGGTGAACAGAAGGGCT TCACTTACTCCATCTTGGCACGCAACAACAGCGCTCCTTTTTCCGCCGTC GTACCTTACACCCTCTTGCAATCCAGTCCCCCCTTGTCAAACATCTTCTC TGTCGTGCTTGCTGCGTCTTGTGGTGGTGGCTTGTAAGCTCTGGCGGATC CCATGTGCGGGTCGGGCACGCTGGTGATAGAGGCGGCTCTCATAGCTCTT CGCCGGGCGCCAGGTTTGGTTGCGATGGGGGCGTATGGGGGTGGGAGTAG GGCGAAAGCGGCCGGTTGGAAGCCTGCGGTGACTGCCTGGCCAGACTTCA ACCCGGTACTCTGGAGAGAGACCGTGGGGGAAGCGCTGCAGCTGCAGAGG GCGAAGCCGCCGGCAGCAATTATGGGGAACGACTGGCATCATGGGGCGTT GTCGCTGGCGTGGGTAAGCGTGTCATGGATACCTTGATGGATGTATAGAA ATCGACCATCGCGTAAGGAAGGGAGTATTTTATTTGAGTGGTCCGACAGA GAACTGTTGTACCGAGGGGTTGATGGAGCTACATCAGTGCACGTACCGGG ATTCCACGAGTTGACATGTGTGCAAAATTACCCCAGGAAAAGAGTATGCA GAAGATTTTATTCCGTTGTACTCCCCTCCCCCTCTGCGCTCCGAGCTTAG AACACTTGCTCTCCATCGAGATTCTTAGACGGAAGCATGTCGAAAAAATC CTTCTTCGGTTGTCCGGGGACATGAGGGGACCATGTCGTCCGCTTAGCTC GCATGTGTGTTGGTGGGCGCTGTCGGATTACTTGTCGATCAAGACCTCCA ACTTGGGTTGAGGGCAATTCTGCCCCCCCCCCCCTTCCGCTGAAAAGGCG GGGAAAACAAGTTAGACGCAGACGATATGACGACGGGATAAGAAAACATG TGGTATATGGAATATGAAAGTGTTCGGGACACATTGGGCAAGGTAGGAAG TAACGATTGGCCTTCGGTAATCGGTCCCGTGGGAACCATGCTTCGTCCTC TCGAGAAGGCGTGGTCAATGGACTAATCGCTAAGGCATGCAGCACATGAG CACGCCCTCCCGGCTCCGTGTGGTCAAGGGTAAAGCTGCTGATGCCATTC ATGAATACACCCCCGCCCCCCCGCCCCGATAACCCGGCTGATCTTCTCAG CGGGACGCAAAGGCTGCCGGTGTAGAGGACTGCATCACTCTCTTCGATGA GGACGTGGAGAGGTGGCGACCCCCCGCTTCTGTCGGCCTTGCTGTCACGA ACCCCCCCTGGGACTACAGGCTCGATCAGGGAGCGGAGAAGAGCTGGCTC GGACTGCTGGAGTTTTTGCGACGAGAAGTAGCCGAGAAGGACGCCTGGGT ATTGTCCGGAAACCCGGCTCTATCGAGAACCCTGCGCATGAAGTCGGAAC AGAACATGTACCTTTCGACGGGGGGGGTGGAGCTGAGGTGGCTCAAGTAT CACTTGAATGAGTACCGCGGGGATAGGGGGAGAAAGGGCGGGGGGACGGG AGGACCGCGACCGAAAAAAGTTCCACGGAAGCACGATCGACCGGCGATAG ATAGGTGGTGATACATTTTTCTATGTTGCACAACAGTTCTTCTTGAAGTT TGTGTGTTACTGTTGCAAAATTGAGTGTTGCTTGTCGCATATCCATCGCT CTGTTGTGCAAAGTGGTGTTGCTATTTTTTTTGAAGAATCATGTTTCCAT GTCAAGAAAAGATACCGTCCCCATGCATTAGTGTTGGGTATACCTG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18417:1..3146+

>mRNA_Ecto-sp13_S_contig18417.5731.1 ID=mRNA_Ecto-sp13_S_contig18417.5731.1|Name=mRNA_Ecto-sp13_S_contig18417.5731.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1032bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18417:1..3146+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAACAAGGGCAGACTTTGTGCGTCGATGCCATTCTGGGGGTGGTACC
TGACGGATTGACGCACTCGCATTTCACCGCTCTCACGGTTAAGAACGCGG
TGGTCGACCAGCTTCGAGACGACGGCAAGCGGCCCTCCGTCGACACGGAG
AACGCGGATCTCCCCTTGGTGGTCTACCTCGACCGTGGCCGGGCCCTCCT
GTACCGCAGCCTTAGCGGCACTCGCTCGATGCATAAGAGGGGGTACCGCG
ACGCAATGCACGCGGCCTCTCTCAAGGAGAATGTCGCCGCAGGGCTCCTC
CTAGCCAGCGGGTGGGACCCTGAGACGCAAGGTGATTGGTGGGGAACTCT
GGCGGATCCCATGTGCGGGTCGGGCACGCTGGTGATAGAGGCGGCTCTCA
TAGCTCTTCGCCGGGCGCCAGGTTTGGTTGCGATGGGGGCGTATGGGGGT
GGGAGTAGGGCGAAAGCGGCCGGTTGGAAGCCTGCGGTGACTGCCTGGCC
AGACTTCAACCCGGTACTCTGGAGAGAGACCGTGGGGGAAGCGCTGCAGC
TGCAGAGGGCGAAGCCGCCGGCAGCAATTATGGGGAACGACTGGCATCAT
GGGGCGTTGTCGCTGGCGTGGCGGGACGCAAAGGCTGCCGGTGTAGAGGA
CTGCATCACTCTCTTCGATGAGGACGTGGAGAGGTGGCGACCCCCCGCTT
CTGTCGGCCTTGCTGTCACGAACCCCCCCTGGGACTACAGGCTCGATCAG
GGAGCGGAGAAGAGCTGGCTCGGACTGCTGGAGTTTTTGCGACGAGAAGT
AGCCGAGAAGGACGCCTGGGTATTGTCCGGAAACCCGGCTCTATCGAGAA
CCCTGCGCATGAAGTCGGAACAGAACATGTACCTTTCGACGGGGGGGGTG
GAGCTGAGGTGGCTCAAGTATCACTTGAATGAGTACCGCGGGGATAGGGG
GAGAAAGGGCGGGGGGACGGGAGGACCGCGACCGAAAAAAGTTCCACGGA
AGCACGATCGACCGGCGATAGATAGGTGGTGA
back to top