mRNA_Ecto-sp13_S_contig18401.5722.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18401.5722.1
Unique NamemRNA_Ecto-sp13_S_contig18401.5722.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig18401.5722.1 vs. uniprot
Match: D7FYQ4_ECTSI (Acyl-CoA oxidase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYQ4_ECTSI)

HSP 1 Score: 417 bits (1073), Expect = 1.240e-141
Identity = 239/274 (87.23%), Postives = 242/274 (88.32%), Query Frame = 1
Query:    1 QVLDYPTQQRVLLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHATSAGLKALVTQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARVHTGRALFPTSVGKRLSEAFSYLSPSSPQQGA--------VSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGRQETTGAGGVAAAGREAMVGAAVELGRATRAHCQLHLVERCTAGVEQQREVAAAAAAAR-GEELNTREVNVLSSLRDLFALSIVEE 795
            QVLDYPTQQRVLLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHATSAGLK+LVTQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTAR H  R+L     GKRLSEAFSYLSPSS QQGA        VSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRG + T GAGG AAAGREAMVGAAVELGRATRAHCQLHLVERC AGVEQQRE          GEELNTREVNVLSSLRDLFALSIVEE
Sbjct:   93 QVLDYPTQQRVLLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHATSAGLKSLVTQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTAR-HLLRSLAAARKGKRLSEAFSYLSPSSTQQGAATTTTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGGKGTAGAGGGAAAGREAMVGAAVELGRATRAHCQLHLVERCMAGVEQQREXXXXXXXXXSGEELNTREVNVLSSLRDLFALSIVEE 365          
BLAST of mRNA_Ecto-sp13_S_contig18401.5722.1 vs. uniprot
Match: A0A6H5JQT9_9PHAE (ACOX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT9_9PHAE)

HSP 1 Score: 395 bits (1014), Expect = 7.310e-135
Identity = 241/333 (72.37%), Postives = 248/333 (74.47%), Query Frame = 1
Query:   85 MKSAYHYYLDTQDAEALPDLHATSAGLKALVTQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARVHTGRALFPTSVGKRLSEAFSYLSPSSPQQGA--------VSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGRQETTGAGGVAAAGREAMVGAAVELGRATRAHCQLHLVERCTAGVEQQREVAAAAA------AARGEELNTREVNVLSSLRDLFALSIVEENMGDFLESGLLEPAAAPLVRWEVQSLCLELRPEAISLTDAWQFTDKYLSSALGRSDGRVYPALMEATMAEPLNATDVAPSIT 1041
            MKSA+HYYLDTQDAEALPDLHATSAGLK+LVTQ                                 +   +G+  +L          R+L     GKRLSEAFSYLSPS  QQGA        VSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQR  Q T GAGG AAA REAMVGAAVELGRATRAHCQLHLVERCTAGVEQQRE             A GEELNTREVNVLSSLRDLFALSIVEENMGDFLESGLLEPAAA LVR EVQSLCLELRPEAISLTDAWQFTDKYLSSALGRSDGRVYPALMEATMAEPLNATDVAPSIT
Sbjct:    1 MKSAFHYYLDTQDAEALPDLHATSAGLKSLVTQ---------------------------------VGEKDGSSHLL----------RSLAAAREGKRLSEAFSYLSPSPTQQGAATTTTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQREGQGTAGAGGGAAAWREAMVGAAVELGRATRAHCQLHLVERCTAGVEQQREXXXXXXXXXXXXVASGEELNTREVNVLSSLRDLFALSIVEENMGDFLESGLLEPAAAALVRREVQSLCLELRPEAISLTDAWQFTDKYLSSALGRSDGRVYPALMEATMAEPLNATDVAPSIT 290          
BLAST of mRNA_Ecto-sp13_S_contig18401.5722.1 vs. uniprot
Match: A0A836CMS5_9STRA (Acyl-coenzyme A oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMS5_9STRA)

HSP 1 Score: 281 bits (718), Expect = 1.670e-85
Identity = 178/345 (51.59%), Postives = 212/345 (61.45%), Query Frame = 1
Query:    4 VLDYPTQQRVLLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHATSAGLKALVTQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARVHTGRALFPTSVGKRLSEAFSYLSPSSPQQGAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGRQETTGAGGVAAAGREAMVGAAVELGRATRAHCQLHLVERCTAGVEQQREVAAAAAAARGEELNTREVNVLSSLRDLFALSIVEENMGDFLESGLLEPAAAPLVRWEVQSLCLELRPEAISLTDAWQFTDKYLSSALGRSDGRVYPALMEATMAEPLNATDVAPSI 1038
            VLDYPTQQR L PLLA+AYALHF G+ M+  Y  YL T D  ALP LHATSAGLKALVTQ+VADGIE ARK+CGGHGYS  SGLPD S+ YLAL TLEGTQQVLEPQ AR            G        YL+         +      L  P  QLRLF+ RA  AVLA + AV     E T AG  AA   EA+   A E GRA RAHCQLHL++   A V+  +  A+A   A    +N RE  VL  L  LFALS +E ++G F +   +    A  V   +  LC  +RPEA++L DA+ F+DKYL SA+GR DG +YPALME  + EPLNA++VA S+
Sbjct:  331 VLDYPTQQRGLFPLLAYAYALHFTGERMRVDYEAYLHTLDQGALPALHATSAGLKALVTQTVADGIETARKLCGGHGYSHASGLPDASANYLALPTLEGTQQVLEPQMARFLLRGLAAARRGGGAPPAGCEYLASERQLLAGGASGAALDLLDPAVQLRLFQRRALVAVLALQVAVA----ELTAAGVDAA---EALGRRAAEAGRAARAHCQLHLLQHFAAAVQALQAQASAGPCAA--VINEREAAVLRDLCSLFALSTIEADLGQFRDQDTISSQDARQVLHLISDLCASIRPEAVALVDAFHFSDKYLGSAIGRFDGNIYPALMEWALREPLNASEVAESL 666          
BLAST of mRNA_Ecto-sp13_S_contig18401.5722.1 vs. uniprot
Match: A0A4D9DB85_9STRA (Acyl-coenzyme A oxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DB85_9STRA)

HSP 1 Score: 196 bits (497), Expect = 5.570e-53
Identity = 150/393 (38.17%), Postives = 199/393 (50.64%), Query Frame = 1
Query:    1 QVLDYPTQQRVLLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHATSAGLKALVTQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARVHTGRALFPTSVGK--------------RLSEAFSYLSPSSPQQGAVSVRIGAQLR--RPETQLRLFRGRARAAVLAAEEAVQRGRQETTGAGGVAAAGREAMVGAAVELGRATRAHCQLHLVERCTAGVEQQR----------------------EVAAAAAAARGEE--------LNTREVNVLSSLRDLFALSIVEENMGDFLESGLLEPAAAPLVRWEVQSLCLELRPEAISLTDAWQFTDKYLSSALGRSDGRVYPALMEATMAEPLNATDVAPSIT 1041
            QVLDYPTQQ  L+PLLA ++AL   GQ M+  Y  YL   D   LP++HA S+GLKAL  + V+ G++  R+MCGGHGY   SGLP++ S Y A+ T EGT QVLEPQ AR     ++ PT   K               LS  F Y+ P +  +  V  R    +    P  Q+  +  R  A +L A E V+   +   G GG+AA+    M+   V  GR +RAHCQL L+ R    V ++                       +  AA  +  GE         +   EV VL +L  LFALS +E +M +F     L    A +V  EV  L   +R EA+SL DAW  +DK L SALGR+DGRVY AL E  +  PLN  +V+ + T
Sbjct:  347 QVLDYPTQQHALMPLLAWSFALQITGQFMRRRYKAYLRELDLSLLPEVHALSSGLKALTGEVVSQGVDVCRRMCGGHGYLLASGLPEVFSNYTAVQTFEGTAQVLEPQLARFILRLSMAPTERPKGSGRGAATAAKAPFALSSDFDYV-PLAAGKTFVRCRAATPVAFLDPAFQIEAYEARVSALLLLAREEVEADLRG--GEGGLAAS----MMKNGVLFGRLSRAHCQLVLLRRFHEAVAREEGRVTMTTARNGGLDGEGNGGRIDRGAADGSEEGESEDREGSVTVGPAEVRVLRNLCHLFALSGMERDMAEFRARDYLSSGQAEMVSREVLRLNRTVRAEAVSLVDAWLLSDKLLGSALGRADGRVYGALFEEALRSPLNDKEVSKAYT 732          
BLAST of mRNA_Ecto-sp13_S_contig18401.5722.1 vs. uniprot
Match: A0A1Y1HUL2_KLENI (Acyl-coenzyme A oxidase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HUL2_KLENI)

HSP 1 Score: 180 bits (456), Expect = 1.280e-47
Identity = 134/349 (38.40%), Postives = 184/349 (52.72%), Query Frame = 1
Query:    1 QVLDYPTQQRVLLPLLAHAYALHFAGQHMKSAYHYYLDTQ---DAEALPDLHATSAGLKALVTQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARVHTGRALFPTSVGKRLSEAFSYLSPSSPQQGAVSVRI----GAQLRRPETQLRLFRGRARAAVLAAEEAVQRGRQETTGAGGVAAAGREAMVGAAVELGRATRAHCQLHLVERCTAGVEQQREVAAAAAAARGEELNTREVNVLSSLRDLFALSIVEENMGDFLESGLLEPAAAPLVRWEVQSLCLELRPEAISLTDAWQFTDKYLSSALGRSDGRVYPALMEATMAEPLNATDV 1026
            Q+++Y TQQ  L PLLA AYA  F G+ M+  Y   +D     D   LP++HA++AGLKAL T   ADGIE  RK+CGG+GY   SGLPDL   Y+   T EG   +L  Q AR +  +     + G++ S A  YL  +   Q   SV+      A   RPE QL     RA   V+     +Q  +              +A+  +AVE+ R +RAHCQ  +V +    V+   E        RG     R+  VL  L +L+A+S +E N+GD LE G L+P  A  V   +  L +++RP+A++L DA+ F++ YL SALGR DG VY  L      EPLN+TDV
Sbjct:  321 QIIEYKTQQHRLFPLLASAYAFTFTGKWMRKLYTEVIDQLNRGDVSGLPEVHASTAGLKALTTSFTADGIEECRKLCGGNGYLMASGLPDLYCAYVPACTYEGDNYILFLQVAR-YLMKVASQLANGEKPSGAAQYLGDA---QRLCSVQCPAKSAADFLRPEVQLEALSARAARLVIGNGMRIQGAKNF-----------EKAIADSAVEMVRMSRAHCQQIVVSKFIEQVQGDIE-------GRG----VRDQLVL--LCNLYAVSQIEANLGDLLEVGYLKPKQASWVHEALAELLIQVRPQAVNLVDAFSFSNHYLGSALGRYDGDVYTDLYARAWKEPLNSTDV 641          
BLAST of mRNA_Ecto-sp13_S_contig18401.5722.1 vs. uniprot
Match: A0A5N5PXM5_PANHP (Acyl-coenzyme A oxidase n=3 Tax=Siluroidei TaxID=1489793 RepID=A0A5N5PXM5_PANHP)

HSP 1 Score: 175 bits (444), Expect = 6.030e-46
Identity = 130/348 (37.36%), Postives = 184/348 (52.87%), Query Frame = 1
Query:    1 QVLDYPTQQRVLLPLLAHAYALHFAGQHMKSAYHYY---LDTQDAEALPDLHATSAGLKALVTQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARVHTGRALFPTSVGKRLSEAFSYLSPSSPQ---QGAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGRQETTGAGGVAAAGREAMVGAAVELGRATRAHCQLHLVERCTAGVEQQREVAAAAAAARGEELNTREVNVLSSLRDLFALSIVEENMGDFLESGLLEPAAAPLVRWEVQSLCLELRPEAISLTDAWQFTDKYLSSALGRSDGRVYPALMEATMAEPLNATDV 1026
            Q+LDY  QQ  L PLLA AYA  F GQ+MK+ Y+     ++  D   LP+LHA +AGLKA  T SV  GIE  R  CGGHGYSQ SGLPD+   + A  T EG   V+  QTAR +  ++      GK+LS   SYL+ S  +   Q   S      +   ++ +  ++ RA   V  A +++Q   Q +           +A   +++EL RA+ AHC   +V+   A +               E  NT   +VLS+L  L+AL  V  N GDFL++GLL       +   +++L  E+RP A++L DA+ + D+ L+SALGR DG VY ++ E     PLN T+V
Sbjct:  320 QILDYQAQQYKLFPLLATAYAFTFVGQYMKNTYNRITGDINQGDFSQLPELHALAAGLKAFTTWSVNAGIEVCRMACGGHGYSQSSGLPDIYVTFTATCTYEGENTVMMLQTAR-YLVKSYRQVRDGKQLSGTVSYLNESHQRFQPQPTGSRPTVININDLQSLVEAYKLRAANLVETAAKSLQTELQRSKSQ-------EDAWNNSSLELVRASDAHCHYVVVKLFAAKLS--------------EISNTAVYSVLSTLALLYALHGVASNSGDFLQAGLLTVPQLSQITQRIKALMAEIRPNAVALVDAFDYRDEMLNSALGRYDGNVYESMFEWAKRSPLNRTEV 645          
BLAST of mRNA_Ecto-sp13_S_contig18401.5722.1 vs. uniprot
Match: UPI00189C953E (peroxisomal acyl-coenzyme A oxidase 1 isoform X3 n=1 Tax=Sebastes umbrosus TaxID=72105 RepID=UPI00189C953E)

HSP 1 Score: 175 bits (444), Expect = 6.100e-46
Identity = 128/350 (36.57%), Postives = 181/350 (51.71%), Query Frame = 1
Query:    1 QVLDYPTQQRVLLPLLAHAYALHFAGQHMKSAYHYY---LDTQDAEALPDLHATSAGLKALVTQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARVHTGRALFPTSVGKRLSEAFSYLSPSS-----PQQGAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGRQETTGAGGVAAAGREAMVGAAVELGRATRAHCQLHLVERCTAGVEQQREVAAAAAAARGEELNTREVNVLSSLRDLFALSIVEENMGDFLESGLLEPAAAPLVRWEVQSLCLELRPEAISLTDAWQFTDKYLSSALGRSDGRVYPALMEATMAEPLNATDV 1026
            Q++DY TQQ  L PLLA AYA HF GQ+M+  YH     ++  D   LP+LHATSAGLKA  T +   GIE  R  CGGHGYS+ S LPD+   +    T EG   V+  QTAR +  +       G++LS   SYL+ +      PQ  A    +   +    T + +++ RA   V  A +++Q+  Q             +A   +A++L RA+ AHC   +V+  T  +              GE  +T   +VLS+L  L+AL  +  N GDFL++GLL       V   ++ L  +LRP A++L DA+   D+ L+S LGR DG VY  + E     PLNAT+V
Sbjct:  320 QIMDYQTQQYKLFPLLATAYAFHFVGQYMRQTYHRISGDINEGDFSQLPELHATSAGLKAFTTWAANSGIEVCRMSCGGHGYSRSSALPDIYVDFTPTCTYEGENTVMMLQTAR-YLVKCYRQAKAGQQLSGIVSYLNEAKHLRVQPQPVAARPTV-VDINDLATLVEVYKQRAAILVELAAKSIQQELQRRKSQ-------EDAWNNSAIDLVRASDAHCHYVVVKLFTDRL--------------GEIGDTAIHSVLSTLALLYALHGITNNSGDFLQAGLLNVPQVMQVSTRIKELLSQLRPNAVALVDAFDVHDRKLNSVLGRYDGNVYENMFEWARRSPLNATEV 646          
BLAST of mRNA_Ecto-sp13_S_contig18401.5722.1 vs. uniprot
Match: A0A060YRY8_ONCMY (Uncharacterized protein (Fragment) n=2 Tax=Salmoninae TaxID=504568 RepID=A0A060YRY8_ONCMY)

HSP 1 Score: 175 bits (443), Expect = 7.890e-46
Identity = 129/354 (36.44%), Postives = 184/354 (51.98%), Query Frame = 1
Query:    1 QVLDYPTQQRVLLPLLAHAYALHFAGQHMKSAYHYY---LDTQDAEALPDLHATSAGLKALVTQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARVHTGRALFPTSVGKRLSEAFSYLSPS---------SPQQGAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGRQETTGAGGVAAAGREAMVGAAVELGRATRAHCQLHLVERCTAGVEQQREVAAAAAAARGEELNTREVNVLSSLRDLFALSIVEENMGDFLESGLLEPAAAPLVRWEVQSLCLELRPEAISLTDAWQFTDKYLSSALGRSDGRVYPALMEATMAEPLNATDV 1026
            Q++DY TQQ  L PLLA AYA  F GQ+M   YH     +   D   LP+LHA SAGLKA  T + ++GIE  R  CGGHGYS+ S LPD+   ++A  T EG   V+  QTAR    ++    S G +LS   SYL+ S         S +   V+V   A L      +  ++ RA   V  A +++Q+  Q+            +A   +A++L RA+ AHC   +V+   A +              GE  +T   +VLS+L  L+AL  +++N GDFL++GLL       V   ++ L  +LRP A++L DA+ + D+ L+S LGR DG VY  + E     PLN T+V
Sbjct:  315 QIMDYQTQQYKLFPLLATAYAYKFVGQYMNQVYHRITGDISQGDFSELPELHALSAGLKAFTTWTASEGIEVCRMACGGHGYSRCSALPDIYVNFVATCTYEGENTVMMLQTARFLI-KSYQQASAGHQLSGIVSYLNESERRLQPQSVSSRPTVVNVNDLASL------VEAYKLRAAKLVEVAAKSIQQELQKRVSQ-------EDAWNNSAIDLVRASNAHCHYVVVKLFAAKL--------------GEIGDTGVHSVLSTLALLYALQGIQQNSGDFLQTGLLSVPQLSQVSQRLKELLAQLRPNAVALVDAFDYCDEMLNSVLGRYDGNVYEHMFEWARRSPLNKTEV 640          
BLAST of mRNA_Ecto-sp13_S_contig18401.5722.1 vs. uniprot
Match: A0A1A8N6G9_9TELE (Acyl-Coenzyme A oxidase 1, palmitoyl (Fragment) n=1 Tax=Nothobranchius pienaari TaxID=704102 RepID=A0A1A8N6G9_9TELE)

HSP 1 Score: 169 bits (429), Expect = 6.620e-45
Identity = 129/354 (36.44%), Postives = 181/354 (51.13%), Query Frame = 1
Query:    1 QVLDYPTQQRVLLPLLAHAYALHFAGQHMKSAYHYY---LDTQDAEALPDLHATSAGLKALVTQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARVHTGRALFPTSVGKRLSEAFSYLSPSS-----PQQGAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAV----QRGRQETTGAGGVAAAGREAMVGAAVELGRATRAHCQLHLVERCTAGVEQQREVAAAAAAARGEELNTREVNVLSSLRDLFALSIVEENMGDFLESGLLEPAAAPLVRWEVQSLCLELRPEAISLTDAWQFTDKYLSSALGRSDGRVYPALMEATMAEPLNATDV 1026
            Q+LDY TQQ  L PLLA AYA  F GQ+M   YH     ++  D   LP+LHA SAGLKA  T     GIE  R  CGGHGYS+ S LPD+   +    T EG   V+  QTAR +  ++      G++LS   SYL+ S      PQ  A    +   +    + + +++ RA   V  A +++    QRG+ +            +A  G+A+EL RA+ AHC   +V+  +  +              GE  +T   +VLS+L  L+A+  + EN GDFL +GLL       +   ++ L  +LRP A++L DA+   DK L+S LGR DG VY  + E     PLNAT+V
Sbjct:  145 QILDYQTQQYKLFPLLATAYAFSFVGQYMSKIYHRISGDINDGDFSELPELHALSAGLKAFTTWVANSGIEVCRMSCGGHGYSRSSALPDIYVAFTPTCTYEGENTVMMLQTAR-YLVKSYRQAKEGQQLSGIVSYLNESQNRRLQPQAVAAQPPV-VDVNDLSSLVEVYKQRAAILVEMAAKSIHQELQRGKSQ-----------EDAWNGSAIELVRASDAHCHYVVVKVFSEKL--------------GEVGDTAIHSVLSTLALLYAMHGITENSGDFLLAGLLSAPQVLQISVRIKELLSQLRPNAVALVDAFDIHDKKLNSVLGRFDGNVYENMFEWARRSPLNATEV 471          
BLAST of mRNA_Ecto-sp13_S_contig18401.5722.1 vs. uniprot
Match: D7FYQ3_ECTSI (Acyl-CoA oxidase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYQ3_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 1.540e-44
Identity = 80/83 (96.39%), Postives = 81/83 (97.59%), Query Frame = 1
Query:  793 ENMGDFLESGLLEPAAAPLVRWEVQSLCLELRPEAISLTDAWQFTDKYLSSALGRSDGRVYPALMEATMAEPLNATDVAPSIT 1041
            +NMGDFLESGLLEPAAAPLVR EVQSLCLELRPEAISLTDAWQFTDKYLSSALGRSDGRVYPALMEA MAEPLNATDVAPSIT
Sbjct:    4 QNMGDFLESGLLEPAAAPLVRREVQSLCLELRPEAISLTDAWQFTDKYLSSALGRSDGRVYPALMEAAMAEPLNATDVAPSIT 86          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18401.5722.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYQ4_ECTSI1.240e-14187.23Acyl-CoA oxidase, partial n=1 Tax=Ectocarpus silic... [more]
A0A6H5JQT9_9PHAE7.310e-13572.37ACOX domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836CMS5_9STRA1.670e-8551.59Acyl-coenzyme A oxidase n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DB85_9STRA5.570e-5338.17Acyl-coenzyme A oxidase n=2 Tax=Monodopsidaceae Ta... [more]
A0A1Y1HUL2_KLENI1.280e-4738.40Acyl-coenzyme A oxidase n=1 Tax=Klebsormidium nite... [more]
A0A5N5PXM5_PANHP6.030e-4637.36Acyl-coenzyme A oxidase n=3 Tax=Siluroidei TaxID=1... [more]
UPI00189C953E6.100e-4636.57peroxisomal acyl-coenzyme A oxidase 1 isoform X3 n... [more]
A0A060YRY8_ONCMY7.890e-4636.44Uncharacterized protein (Fragment) n=2 Tax=Salmoni... [more]
A0A1A8N6G9_9TELE6.620e-4536.44Acyl-Coenzyme A oxidase 1, palmitoyl (Fragment) n=... [more]
D7FYQ3_ECTSI1.540e-4496.39Acyl-CoA oxidase, partial n=1 Tax=Ectocarpus silic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18401contigEcto-sp13_S_contig18401:2..3493 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeMetazoa
Stop0
Start0
Seed ortholog score171.8
Seed ortholog evalue5.7e-40
Seed eggNOG ortholog8010.XP_010887715.1
Preferred nameACOX1
Model size1041
KEGG rclassRC00052,RC00076
KEGG koko:K00232
KEGG ReactionR01175,R01279,R03777,R03857,R03990,R04751,R04754,R07888,R07892,R07896,R07934,R07950
KEGG Pathwayko00071,ko00592,ko01040,ko01100,ko01110,ko01212,ko03320,ko04024,ko04146,map00071,map00592,map01040,map01100,map01110,map01212,map03320,map04024,map04146
KEGG ModuleM00087,M00113
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000038,GO:0000166,GO:0001676,GO:0003674,GO:0003824,GO:0003995,GO:0003997,GO:0005102,GO:0005488,GO:0005504,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005777,GO:0005778,GO:0005782,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006690,GO:0006692,GO:0006693,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0007276,GO:0007283,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009058,GO:0009062,GO:0009987,GO:0010817,GO:0015031,GO:0015833,GO:0016020,GO:0016042,GO:0016043,GO:0016054,GO:0016137,GO:0016138,GO:0016401,GO:0016491,GO:0016559,GO:0016627,GO:0016634,GO:0017144,GO:0019216,GO:0019222,GO:0019395,GO:0019748,GO:0019752,GO:0019904,GO:0019953,GO:0022414,GO:0030165,GO:0030258,GO:0031090,GO:0031406,GO:0031903,GO:0031907,GO:0031974,GO:0031981,GO:0032501,GO:0032504,GO:0032787,GO:0033036,GO:0033293,GO:0033365,GO:0033539,GO:0033540,GO:0033559,GO:0034440,GO:0034613,GO:0036094,GO:0036109,GO:0042445,GO:0042446,GO:0042579,GO:0042592,GO:0042632,GO:0042802,GO:0042803,GO:0042810,GO:0042811,GO:0042886,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044428,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0044703,GO:0045184,GO:0046395,GO:0046907,GO:0046983,GO:0047485,GO:0048037,GO:0048232,GO:0048285,GO:0048609,GO:0048878,GO:0050660,GO:0050662,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0055088,GO:0055092,GO:0055114,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0071949,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:0080090,GO:0097159,GO:0098588,GO:0098805,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901568,GO:1901575,GO:1901576,GO:1901657,GO:1901659,GO:1904069,GO:1904070
Exons7
EggNOG free text desc.acyl-Coenzyme A oxidase
EggNOG OGs38BTU@33154,3BATK@33208,3CV9T@33213,48AZK@7711,48V4I@7742,49ZRG@7898,COG1960@1,KOG0136@2759
EC1.3.3.6
Cds size1041
COG Functional cat.I
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18401.5722.1prot_Ecto-sp13_S_contig18401.5722.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18401 2..3493 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462946.0003703-CDS-Ecto-sp13_S_contig18401:1..1841681462946.0003703-CDS-Ecto-sp13_S_contig18401:1..184Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18401 2..184 +
1681462946.0143461-CDS-Ecto-sp13_S_contig18401:657..8061681462946.0143461-CDS-Ecto-sp13_S_contig18401:657..806Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18401 658..806 +
1681462946.0244403-CDS-Ecto-sp13_S_contig18401:927..9641681462946.0244403-CDS-Ecto-sp13_S_contig18401:927..964Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18401 928..964 +
1681462946.033983-CDS-Ecto-sp13_S_contig18401:1192..14431681462946.033983-CDS-Ecto-sp13_S_contig18401:1192..1443Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18401 1193..1443 +
1681462946.0451784-CDS-Ecto-sp13_S_contig18401:1902..20771681462946.0451784-CDS-Ecto-sp13_S_contig18401:1902..2077Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18401 1903..2077 +
1681462946.055808-CDS-Ecto-sp13_S_contig18401:2567..27371681462946.055808-CDS-Ecto-sp13_S_contig18401:2567..2737Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18401 2568..2737 +
1681462946.0658052-CDS-Ecto-sp13_S_contig18401:3417..34931681462946.0658052-CDS-Ecto-sp13_S_contig18401:3417..3493Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18401 3418..3493 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18401.5722.1

>prot_Ecto-sp13_S_contig18401.5722.1 ID=prot_Ecto-sp13_S_contig18401.5722.1|Name=mRNA_Ecto-sp13_S_contig18401.5722.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=347bp
QVLDYPTQQRVLLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHA
TSAGLKALVTQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEG
TQQVLEPQTARVHTGRALFPTSVGKRLSEAFSYLSPSSPQQGAVSVRIGA
QLRRPETQLRLFRGRARAAVLAAEEAVQRGRQETTGAGGVAAAGREAMVG
AAVELGRATRAHCQLHLVERCTAGVEQQREVAAAAAAARGEELNTREVNV
LSSLRDLFALSIVEENMGDFLESGLLEPAAAPLVRWEVQSLCLELRPEAI
SLTDAWQFTDKYLSSALGRSDGRVYPALMEATMAEPLNATDVAPSIT
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mRNA from alignment at Ecto-sp13_S_contig18401:2..3493+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18401.5722.1 ID=mRNA_Ecto-sp13_S_contig18401.5722.1|Name=mRNA_Ecto-sp13_S_contig18401.5722.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3492bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18401:2..3493+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTGTTAGACTACCCCACCCAACAGCGGGTCCTCTTGCCACTCCTGGC TCACGCCTACGCGCTCCACTTCGCCGGACAGCACATGAAGTCCGCCTACC ACTACTACCTCGACACCCAAGACGCGGAAGCCCTTCCGGACTTGCACGCC ACAAGCGCTGGGCTTAAGGCTCTCGTAACGCAGGTGGGTGAAAAAAAATA GGCCGTCGTACTCCCCCACCCTCAGCATCTACCTCCTTTTTGTGCTCCTG GCCCCGTTTGCCGCGTCTCTTTGTTTCCGCCTGCTGCTGCCCCTTTCTCT GTAGTTGGTTGGTTCGCTCGGTGTCTATCTGTGTCCTGCTCCTCCCCCTC ACTTCCCTTCACCGTACGACCGTATCCTCCACCGTTACGAGCATTCTCCA CGTCCCTCGTCCTGTCTTTTTGTCTCCCTGATCCCATCATGTACCATTCT TTTCGACAAAACAAGGGCCGTTCGGGCACTTCTGCGAAAACCCCCAAATG GTCCCTGTGTCACCGAGCAAGGTATACTTTTTGAATTGAGTATGTACAGC CACACCCGGTCCCCGTACGCCTCTCCTCTCTCCTGGTCCAAAAATGGGAC GGGTCGTGGCACGAAACGCCCTTCCTTACCGTATGCGCTGTTCCCTCCCA TGTTAGAGCGTAGCGGACGGCATCGAAGCGGCCCGCAAGATGTGCGGGGG TCACGGCTACTCCCAGTTCAGCGGCCTGCCCGACCTTTCGTCGGGGTACC TTGCGCTTGCGACGCTGGAGGGCACCCAGCAGGTTCTGGAGCCTCAGACA GCCAGGTAAGCGAGAGTTTTTTGTGTGCACGCTGCTCGGCACGACACTGC TGCGTTGCAAGCGTGTTTGCCGCGCCTGATTGCTTGGTGAACCTTGCGTT GTATGCATGCATCGAATCCCGATCAGGGTACACACAGGTCGGGCGTTATT CCCCACCTCTGTTGTGTTTTCCGAAAAAGATACTTAACGACTACGTTGTT CCTCTGCTTTTCCAAGACAAATTCCCCACCTCTGTTGTGTTTTCCGAAAA AGATACTTAACGACTACGTTGTTCCTCTGCTTTTCCAAGACGATTGACTC TTTACGACCACGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACTCCTC TCCCCCCCCCCCCCCCCCCCCCCGCACCCCCGGCCCGCAAGGGCAAGCGC TTGAGCGAGGCGTTCTCGTACCTCTCCCCGTCTTCTCCCCAACAAGGCGC CGTGAGCGTGAGGATAGGCGCCCAACTCAGGAGGCCGGAGACCCAGCTGC GATTGTTCCGCGGCCGCGCTCGCGCAGCGGTGTTGGCGGCGGAGGAGGCG GTGCAGCGGGGGAGGCAGGAGACTACTGGAGCAGGGGGGGTGGCGGCGGC TGGGCGGGAGGCTATGGTAGGGGCCGCGGTCGAGCTCGGGAGGTGAGAGC AGCCGTGTGTTGTTTTTGGGGGGGGGTGAATGGCTTCGTGGGGTCAGTAG CTGGGCAGCACGACGCCCTTACAGTTTGACCGGAGTTGCGCGGAAGGGAT GTTCGTTTTTTTTTCTTTCGGTGTGGTCGTTGGTGGTGCTGGACGTTGCG TTGTGCAATGTGGTGTATTCCTTTGTTTATTGGGGGTTGGGAAACGTTTT TGCGAGGTGCTTGGTGTCAGACCGTGCTGAAGTCGGGGTGGGCGGTGACG GTAGTCGGAAAGCAGCGAGTGTTCTTGTCCATTTTTTCTCCTTGTCTGTT TCGCACGCTGCTGCACAATGCGTGCCGCTATATCTCTCCATTGTTTCGAC TCTGGAAGGCAGCTTTAATAGTTCAAGATCGCGATCAGGGTCCTCTCCTA CCGCTTATTTCTTCCCTTTGCACGTTATGCTGCTTATCCTTCGCCGGTCA GGGCGACCCGCGCGCACTGCCAGCTACACCTCGTGGAGAGGTGCACGGCG GGGGTGGAGCAGCAGCGGGAAGTGGCGGCGGCGGCGGCGGCGGCAAGGGG GGAGGAGCTCAACACCCGCGAGGTCAACGTCCTGTCGTCTCTGAGGGACT TGTTCGCGCTCTCCATCGTCGAAGAGGTGCGCGCGCACCACCGACCTTCC AACAATAAGAGCTGTTACAGCGATTAAGTTCTCTCGAAAAACATCACCCT TTTTTCGTTCGCTGCTGGTTGCTATTCGCTCCTCGTAAGCTACACATATG TATGCGAACCAGGTTGCGGTAAACCATGTAGCATCTCCTCTCCACCCGGC CTAGAGTTTTGTTCCCGCTCTTACCCCTCTAACGACGCTGATGCCACTAT ATGGCGTCGTTCCCCTTCCCGCAGTGTTCCTCGTAAAAGCGCAGGACGCG TGGTCAATGGTTGACCAGCTGCACTAAGGCATGCAAAAAATGAGTATGTC CCCCCCCCCCGTGGTATTGTGAGGGCCTGGTCCGGTGAAAACACGGCGTG CTCCGTCCCGGCTTTGTATGGATGCGAGGTCAATGGTCCGACGACTTTGG CATGCACGACTATGAGCACACACACACACACACCTAACGTTCTTGTGCGT GAAAATGCACACGCAGAACATGGGCGACTTCCTCGAGAGTGGCCTCCTAG AGCCGGCGGCGGCGCCGCTCGTGAGGTGGGAGGTGCAGAGCCTGTGCCTC GAGCTGCGCCCCGAGGCGATCTCGCTGACGGACGCGTGGCAGTTCACTGA CAAGTACCTCTCCTCCGCTCTCGGCAGAAGCGACGGGTACGTGTGGGTGT TGTGTGCTGTTTTTTTAGTTCAAGCAGCATCGACAGTGATCAGCCGGCTG ACCAATGAAAATACGTTTTATCTCAGTGAGTTTGAAAACAGGACATGCTT CTCGACGCCATGGTAGTAATCTGTACGAGAGCTTGATTTTAATTTTTATC TCTTGACCAATGAAGAGACGTCAGTCTCAGTACACCTGAAAGCAGAAAAT GCTTCCAAAGGCCACGATCGACCATGAGTTTCATGTGCGTGATCTTCAAT TGTTTTCTTCTCTCTTCTCGAAGTGTTCGGGCCCTTTTGGGGGAGGTTCT CCTTTGTTGCTCTTTTGTCCCCACCTGGTCTGTTTTCGAGCTCCCCTCCC ACCTCTTTGCTTCCTGTTTTCGTCCTGCTTCACCAGCCGGACAGGAGGTT GGTCTTATCGTGCTTTCCGCTCATGTTGTTGGTGGTGATGGCATGTCTTT GTTGCCGCAATTTAGTAACGAGGTACTGGGATGCATCGACAACTTAAAGG TTTCGCTTCCGAAACACTCGACGCTGTTTGTCGCGGTGCCTCTCTGCTTC TTAGGAATGTGGCAACGATGTCAAAATTTGTCGCGCGAGCAATGCACATC TTCCCCCCCCCTCCCCCGCGCGATATGGTACCCGCTACTTGGTTACGCAC CCCCCTCGGAGAGCAGGCGCGTGTACCCGGCTCTCATGGAGGCGACCATG GCGGAGCCCCTCAACGCCACCGACGTCGCCCCGTCCATCACG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18401:2..3493+

>mRNA_Ecto-sp13_S_contig18401.5722.1 ID=mRNA_Ecto-sp13_S_contig18401.5722.1|Name=mRNA_Ecto-sp13_S_contig18401.5722.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1041bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18401:2..3493+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTGTTAGACTACCCCACCCAACAGCGGGTCCTCTTGCCACTCCTGGC
TCACGCCTACGCGCTCCACTTCGCCGGACAGCACATGAAGTCCGCCTACC
ACTACTACCTCGACACCCAAGACGCGGAAGCCCTTCCGGACTTGCACGCC
ACAAGCGCTGGGCTTAAGGCTCTCGTAACGCAGAGCGTAGCGGACGGCAT
CGAAGCGGCCCGCAAGATGTGCGGGGGTCACGGCTACTCCCAGTTCAGCG
GCCTGCCCGACCTTTCGTCGGGGTACCTTGCGCTTGCGACGCTGGAGGGC
ACCCAGCAGGTTCTGGAGCCTCAGACAGCCAGGGTACACACAGGTCGGGC
GTTATTCCCCACCTCTGTTGGCAAGCGCTTGAGCGAGGCGTTCTCGTACC
TCTCCCCGTCTTCTCCCCAACAAGGCGCCGTGAGCGTGAGGATAGGCGCC
CAACTCAGGAGGCCGGAGACCCAGCTGCGATTGTTCCGCGGCCGCGCTCG
CGCAGCGGTGTTGGCGGCGGAGGAGGCGGTGCAGCGGGGGAGGCAGGAGA
CTACTGGAGCAGGGGGGGTGGCGGCGGCTGGGCGGGAGGCTATGGTAGGG
GCCGCGGTCGAGCTCGGGAGGGCGACCCGCGCGCACTGCCAGCTACACCT
CGTGGAGAGGTGCACGGCGGGGGTGGAGCAGCAGCGGGAAGTGGCGGCGG
CGGCGGCGGCGGCAAGGGGGGAGGAGCTCAACACCCGCGAGGTCAACGTC
CTGTCGTCTCTGAGGGACTTGTTCGCGCTCTCCATCGTCGAAGAGAACAT
GGGCGACTTCCTCGAGAGTGGCCTCCTAGAGCCGGCGGCGGCGCCGCTCG
TGAGGTGGGAGGTGCAGAGCCTGTGCCTCGAGCTGCGCCCCGAGGCGATC
TCGCTGACGGACGCGTGGCAGTTCACTGACAAGTACCTCTCCTCCGCTCT
CGGCAGAAGCGACGGGCGCGTGTACCCGGCTCTCATGGAGGCGACCATGG
CGGAGCCCCTCAACGCCACCGACGTCGCCCCGTCCATCACG
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