mRNA_Ecto-sp13_S_contig1840.5720.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1840.5720.1 vs. uniprot
Match: D8LJR2_ECTSI (Coatomer protein complex, gamma sub-unit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR2_ECTSI) HSP 1 Score: 859 bits (2219), Expect = 1.180e-310 Identity = 438/454 (96.48%), Postives = 441/454 (97.14%), Query Frame = 1
Query: 1 MSIAPVSQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKASRNTTFARIENVKFWEGGDPPPCFTIDGVNYIYVRKNGLLFAVSTQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKSMRLPSALKTKTAPSSSIQKPVSGSGQKNGSQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKANAGSSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVGDIDPYRMEVVVIVRADMPETAAGTNVVVRVPMPRNAVSVSSEVESRVPGQTAEYSANEHRVVWTIKKFQGSSELTLRAKVTLPNVVNAANRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCRV 1362
MSIAPVSQFFILSPRGDTIISKDYRGDAVAGTTDTFFRK VKFWE GDPPPCFTIDGVNYIYVRKNGLLFAVSTQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKSMRLPSALKTKTAPSSSIQKPVSGSGQKNGSQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKANAGSSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYR+NAEFRCPFRLFPS+GDIDPYRMEVVVIVRADMPETAAGTNVVVR+PMPRNAVSVSSEVESRVPGQTAEYSANEHRVVWTIKKFQGSSELTLRAKVTLPNVVNAANRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCRV
Sbjct: 1 MSIAPVSQFFILSPRGDTIISKDYRGDAVAGTTDTFFRK------------VKFWESGDPPPCFTIDGVNYIYVRKNGLLFAVSTQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKSMRLPSALKTKTAPSSSIQKPVSGSGQKNGSQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKANAGSSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRMNAEFRCPFRLFPSIGDIDPYRMEVVVIVRADMPETAAGTNVVVRLPMPRNAVSVSSEVESRVPGQTAEYSANEHRVVWTIKKFQGSSELTLRAKVTLPNVVNAANRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCRV 442
BLAST of mRNA_Ecto-sp13_S_contig1840.5720.1 vs. uniprot
Match: A0A835YW81_9STRA (Coatomer protein complex, gamma sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW81_9STRA) HSP 1 Score: 604 bits (1558), Expect = 3.090e-210 Identity = 304/455 (66.81%), Postives = 364/455 (80.00%), Query Frame = 1
Query: 1 MSIAPVSQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKASRNTTFARIENVKFWEGGDPPPCFTIDGVNYIYVRKNGLLFAVSTQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKSMRLPSALKTKTAPSSSIQKPVSGSGQKNGSQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKANAGSSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVGDIDPYRMEVVVIVRADMPETAAGTNVVVRVPMPRNAVSVSSEVESR-VPGQTAEYSANEHRVVWTIKKFQGSSELTLRAKVTLPNVVNAANRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCRV 1362
MSIAP+S FFILSPRGDTIISKDYRGD V G TD FFRK VKF EGGDPPPC IDGVNY++VRKNGLLF V+T+WN SPS +ELL+RLAKVFKDYCG L+EEAIRKNFIL+YELLDE LDYGYPQ T TE+L+++V NEPI V+ KS+R+PS L KT PSS+ KP++GS QRNEIFVDILERL+VLF +GQ++NSSIDGCIQMKSYLSGNPEL+LALNEDLV+G+ S++G+VVLDDCNFHEC +LD+FES RQL+ PPDGEFV LNYRI AEFR PFR+FPSV + D +E++++VRADMPE G+NVVV VP+PR A +VS+E++ R +PGQ+AEY+A RV WTIK+FQG +E +LR +VTL A R+E+GP+S FE+PMY+VS LQVRYLKIA+ K+YNP+RWVRYVT SSSYV RV
Sbjct: 1 MSIAPISHFFILSPRGDTIISKDYRGDVVPGGTDIFFRK------------VKFTEGGDPPPCMNIDGVNYLFVRKNGLLFGVTTRWNCSPSQVIELLHRLAKVFKDYCGTLTEEAIRKNFILIYELLDEMLDYGYPQTTGTESLKSYVYNEPIAVEPSKSLRIPSTLGAKTNPSSAAHKPITGS-TGGAKQRNEIFVDILERLNVLFGANGQILNSSIDGCIQMKSYLSGNPELKLALNEDLVIGRGQT-STYGAVVLDDCNFHECVRLDDFESGRQLTLVPPDGEFVALNYRITAEFRAPFRMFPSVTETDALHLELLLLVRADMPEAQYGSNVVVSVPVPRAAGTVSAEIDPRALPGQSAEYNATAKRVDWTIKRFQGGTEQSLRVRVTLTQPCTATTRRELGPISASFEVPMYSVSGLQVRYLKIADAGKAYNPYRWVRYVTLSSSYVARV 441
BLAST of mRNA_Ecto-sp13_S_contig1840.5720.1 vs. uniprot
Match: A0A4D9D754_9STRA (MHD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D754_9STRA) HSP 1 Score: 562 bits (1448), Expect = 3.460e-193 Identity = 287/484 (59.30%), Postives = 359/484 (74.17%), Query Frame = 1
Query: 16 VSQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKASRNTTFARIENVKFWEGGDPPPCFTIDGVNYIYVRKNGLLFAVSTQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKS-MRLPSALKTKTAPSSSIQKPVSGSGQKNGSQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKANAGSSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVGDIDPYRMEVVVIVRADMPETAAGTNVVVRVPMPRNAVSVSSEVESRVPGQTAEYSANEHRVVWTIKKFQGSSELTLRAKVTL----------------------------------PNVVNAANRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCRV 1362
+S FFILSPRGDTIIS+D+RGD++ + FRK VKFW+ GD PP F +DG+N++YVRKNGLLF +T++NVSPS +ELLNR+AKVFKDYCGVLSEE+IRKNFILVYELLDE +D+GY Q TSTE+L+NHV NEPI+V+S KS +R+P + +KT PS+++ KP++ S Q G Q+NEIFVDILERL+VLFS SG ++NS+IDGCIQMKSYLSGNPEL+LALN DLV+GK G +G+VVLDDCNFHEC +LDEFES R LSF PPDGEF+LLNYRI EFR PFR+FP+V ++ PY++E+ +++RAD+PE+ G NV VRVPMPR+A++ T+EY+A+E RVVW IKKF G++E TL K+TL P + + RKE+GPVSM FEIPMYNVSNLQVRYL+I+E KSYNP+RWVRYVTQ+SS+VCRV
Sbjct: 5 MSSFFILSPRGDTIISRDFRGDSLPNAAELLFRK------------VKFWDKGDAPPVFHLDGLNFVYVRKNGLLFGATTRFNVSPSTTVELLNRMAKVFKDYCGVLSEESIRKNFILVYELLDEMMDFGYAQATSTESLKNHVYNEPIVVESAKSNLRMPK-INSKTTPSTAVHKPITISAQSGGKQKNEIFVDILERLNVLFSGSGYIINSTIDGCIQMKSYLSGNPELKLALNSDLVIGKGGGG--YGAVVLDDCNFHECVRLDEFESSRTLSFFPPDGEFILLNYRITGEFRAPFRIFPTVDEVSPYKVEMTLMIRADIPESNYGANVQVRVPMPRSAIA------------TSEYNASEKRVVWNIKKFPGATEQTLSIKITLAGGGVXXXXXXXXXXXXXNSXSTGSMSAGGTAPPPGQLIGSARKEIGPVSMSFEIPMYNVSNLQVRYLRISEQQKSYNPYRWVRYVTQASSFVCRV 461
BLAST of mRNA_Ecto-sp13_S_contig1840.5720.1 vs. uniprot
Match: A0A7S2UX12_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX12_9STRA) HSP 1 Score: 553 bits (1424), Expect = 1.380e-189 Identity = 276/456 (60.53%), Postives = 342/456 (75.00%), Query Frame = 1
Query: 16 VSQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKASRNTTFARIENVKFWEGGDPPPCFTIDGVNYIYVRKNGLLFAVSTQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDS-----VKSMRLPSALKTKTAPSSSIQKPVSGS--GQKNGSQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKANAGSSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVGDIDPYRMEVVVIVRADMPETAAGTNVVVRVPMPRNAVSVSSEVESRVPGQTAEYSANEHRVVWTIKKFQGSSELTLRAKVTLPNVVNAANRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCRV 1362
VSQFFILSPRG+TIISK YRG AG + FFRK VKFWEGGD PP F +DG NYIY+++NG++F +T +N SP+ +ELLNR+ K+FKDYCGVLSEEAIRKNF+L+YELLDE +DYG+PQ TSTE L+N++ NEP+LVD L AP+SS KPV G+ G+ QRNEIFVDI+ERL+VLFS SG +NSSIDG IQMKS+L+GNPELRLALN+DLV+GK G +GSVVLDDCNFHE +LD FE R LS PPDGEFV+LNYR+ +EFR PFRLFP++ ++ PY++E+V++VRAD+PE+ G NV V +P+PR A S + E+ V GQ+ EY E ++VWTIKKF G +E LRAK+TL + A R+E+GP+SM FEIPMYNVS+LQVRYL+IAE K+YNP+RWVRYVTQS+SYVCRV
Sbjct: 24 VSQFFILSPRGETIISKTYRGSFKAGAAEEFFRK------------VKFWEGGDAPPAFNLDGTNYIYIKRNGIIFLFTTMFNSSPATLIELLNRIIKIFKDYCGVLSEEAIRKNFVLLYELLDEVIDYGHPQCTSTEALKNYIYNEPVLVDQRGIAGQVQRNLRRVTNPNKAPASSGAKPVQGATKGKAGAKQRNEIFVDIIERLNVLFSPSGYTLNSSIDGRIQMKSFLTGNPELRLALNDDLVIGKG--GGQYGSVVLDDCNFHEAVRLDSFEMSRTLSLVPPDGEFVVLNYRVTSEFRTPFRLFPAIEEVSPYKLELVLMVRADIPESNYGANVTVTIPVPRTAASATGEMGENVVGQSCEYDQGERKLVWTIKKFPGGTEQGLRAKITLASATAPAARREIGPISMGFEIPMYNVSHLQVRYLRIAEADKTYNPYRWVRYVTQSNSYVCRV 465
BLAST of mRNA_Ecto-sp13_S_contig1840.5720.1 vs. uniprot
Match: A0A7S2SFF0_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SFF0_9STRA) HSP 1 Score: 549 bits (1414), Expect = 2.060e-188 Identity = 274/457 (59.96%), Postives = 360/457 (78.77%), Query Frame = 1
Query: 7 IAPVSQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKASRNTTFARIENVKFWEGG-DPPPCFTIDGVNYIYVRKNGLLFAVSTQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVK---SMRLPSALKTKTAPSSSIQKPVSGSGQKNGSQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKANAGSSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVGDIDPYRMEVVVIVRADMPETAAGTNVVVRVPMPRNAVSVSSEVESRVP--GQTAEYSANEHRVVWTIKKFQGSSELTLRAKVTLPNVVNAANRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCR 1359
++ +SQF+ILSPRGDTIIS+DYR + G ++ FFR NVKFW+GG + PPCF IDG+N+++++++GL F +T++NVSP+ FLELL RLAK+FKDYCGVLSEEAIRKNFIL+YELLDE +DYGYPQ TSTE L+ HV NEP++VDS+K + ++PS + KT PSSS+ KPV+ + +NG QRNEIFVDILER+++LF+ +G +++S IDG IQMKSYL GNP LRLALNEDLVVGK + GS++GSVVLDDCNFHEC +LDEFE+MR L+F PPDGEFV++NYRI+ EF PFR++P + + P ++EV+V +RAD+P G N+ V +P+P + VS+ V+S V GQ+AEY E++VVW+IKKFQG SE T+RAK+ L ++AA R+E+GPVS+ FEIPM+NVSNLQV+YL+I E ++YNP RWVRYVTQ+ SYVCR
Sbjct: 1 MSSISQFYILSPRGDTIISRDYRSNVAKGASEIFFR------------NVKFWQGGGEAPPCFNIDGINFVFIKQSGLYFVCTTKYNVSPNFFLELLQRLAKLFKDYCGVLSEEAIRKNFILIYELLDEIVDYGYPQCTSTEQLKAHVHNEPVVVDSIKQANAFKVPS-INQKTTPSSSVYKPVTMAA-RNGQQRNEIFVDILERVTMLFNNNGYILSSHIDGSIQMKSYLFGNPPLRLALNEDLVVGKGD-GSNYGSVVLDDCNFHECVRLDEFETMRTLNFVPPDGEFVVMNYRISNEFVAPFRVYPFIEEATPTQIEVIVKIRADIPVNHFGANMTVTIPVPAKSNGVSARVDSGVSATGQSAEYRPKENKVVWSIKKFQGGSEHTVRAKIDLKEPISAAVRREIGPVSLNFEIPMFNVSNLQVKYLRIVEQNRTYNPHRWVRYVTQTCSYVCR 442
BLAST of mRNA_Ecto-sp13_S_contig1840.5720.1 vs. uniprot
Match: F0Y376_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y376_AURAN) HSP 1 Score: 536 bits (1380), Expect = 2.860e-183 Identity = 282/458 (61.57%), Postives = 345/458 (75.33%), Query Frame = 1
Query: 16 VSQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKASRNTTFARIENVKFWEG-----GDPPPCFTIDGVNYIYVRKNGLLFAVSTQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKSMRLPSALKTKTAPSSSIQKPVSG--SGQKNG--SQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKANAGSSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVGDIDPYRMEVVVIVRADMPETAAGTNVVVRVPMPRNAVSVSSEVESR-VPGQTAEYSANEHRVVWTIKKFQGSSELTLRAKVTLPNVVNAANRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCR 1359
+SQFF+LSPRGDTIISKD+RGD+ G + FFRK VKFW G PP F + V Y++V+K+GL+FA ++++N SPSM LELLNR+ KVFKDYCGVLSEEAIRKNFIL+YELLDE +D+GYPQGTSTE L+ V NEP+LVD+ K+ R+PS L KT PS+S+ KP++G S G S +NEIFVDILERL++LFS SG VVNS+IDGCIQMKSYLSGNPELRLALNEDLVVGK G ++G+VVLDDCNFHEC +LD+FES R LSF PP+GEFV+LNYR +FR PFR+ P + + P+ ++VVV+VRA++PET G NVV+ VP PR S S G A+Y A ++V+T+KKFQG E RAK+TL V A RKEVGPVS+ FEIPMYNVSNLQV+YL+IAE +K+YNP+RWVRYVT+SSSYVCR
Sbjct: 2 LSQFFVLSPRGDTIISKDFRGDSPQGAAEAFFRK------------VKFWSNDKGASGAAPPVFRVGDVTYVWVKKSGLMFACNSRFNCSPSMTLELLNRVVKVFKDYCGVLSEEAIRKNFILIYELLDEVIDFGYPQGTSTENLKAFVYNEPVLVDAQKT-RVPS-LSAKTTPSTSVHKPIAGGKSSVMGGARSDKNEIFVDILERLTMLFSPSGAVVNSTIDGCIQMKSYLSGNPELRLALNEDLVVGK---GGAYGAVVLDDCNFHECVRLDDFESSRLLSFLPPEGEFVVLNYRCTGDFRAPFRVLPQIEESSPFTIDVVVLVRAEIPETNYGGNVVITVPCPRTTAGASCGPPSGGAIGHGADYDAANRKLVFTVKKFQGGVEHAFRAKITLSAVCTAQARKEVGPVSLTFEIPMYNVSNLQVKYLRIAEQSKAYNPYRWVRYVTRSSSYVCR 442
BLAST of mRNA_Ecto-sp13_S_contig1840.5720.1 vs. uniprot
Match: A0A7S4A8F1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8F1_9STRA) HSP 1 Score: 531 bits (1367), Expect = 1.790e-181 Identity = 266/452 (58.85%), Postives = 347/452 (76.77%), Query Frame = 1
Query: 16 VSQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKASRNTTFARIENVKFWEGGDPPPCFTIDGVNYIYVRKNGLLFAVSTQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKSMRLPSALKTKTAPSSSIQKPVSGSGQKN----GSQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKANAGSSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVGDIDPYRMEVVVIVRADMPETAAGTNVVVRVPMPRNAVSVSSEVESRVPGQTAEYSANEHRVVWTIKKFQGSSELTLRAKVTLPNVVNAANRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCR 1359
+SQFF+LSPRGDTIISKDYRGD+ G + FFR+ + PPCF I+ V Y++V+++GL+F +T++N SPS +ELLNRL KVFKDYCGVLSEEAIRKNFIL+YELLDE +D+GYPQGTSTE L+ + NEP+LVD+ K +R+PS L TKT SS++ KP+ GS + G+ RNEIFVDILERL++LF+ +G VVNS+IDGCIQMKSYL+GNPELRLALNEDLVVGK G +G+VVLDDCNFHEC +LD+FE+ R LSF PP+GEFV+LNYR +FR PFR+ P + + PY++E++V+VR+++P+T G++V + VP PRN + S+ S G +A+Y+A + ++ + +KKFQG EL RAK+TL ++ A RKE+GPVSM FEIPMYNVSNLQV+YL+IAE +++YNP+RWVRYVT+SSSYVCR
Sbjct: 2 LSQFFVLSPRGDTIISKDYRGDSPPGAAEAFFRRCREERSC--------------PPCFRINDVTYVWVKQHGLMFVCNTRFNASPSTIIELLNRLVKVFKDYCGVLSEEAIRKNFILIYELLDEIVDFGYPQGTSTENLKACIYNEPLLVDAQK-LRVPS-LSTKTVSSSAVHKPI-GSRKTGTIGGGAARNEIFVDILERLTMLFAANGSVVNSTIDGCIQMKSYLAGNPELRLALNEDLVVGK---GGPYGTVVLDDCNFHECVRLDDFEAQRLLSFVPPEGEFVVLNYRTAGDFRAPFRVLPQIEEATPYQLEIIVLVRSEIPDTNYGSDVTITVPCPRNCTAASATAPS---GSSADYNATQRKLTFHVKKFQGGLELAFRAKITLSSICTAQTRKEIGPVSMTFEIPMYNVSNLQVKYLRIAEASQNYNPYRWVRYVTRSSSYVCR 430
BLAST of mRNA_Ecto-sp13_S_contig1840.5720.1 vs. uniprot
Match: A0A812WLM7_SYMMI (AP4M protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WLM7_SYMMI) HSP 1 Score: 528 bits (1361), Expect = 1.730e-180 Identity = 265/450 (58.89%), Postives = 342/450 (76.00%), Query Frame = 1
Query: 16 VSQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKASRNTTFARIENVKFWEGGDPPPCFTIDGVNYIYVRKNGLLFAVSTQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDS-VKSMRLPSALKT-KTAPSSSIQKPVSGSGQKNGSQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKANAGSSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVGDIDPYRMEVVVIVRADMPETAAGTNVVVRVPMPRNAVSVSSEVESRVPGQTAEYSANEHRVVWTIKKFQGSSELTLRAKVTLPNVVNAANRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCR 1359
+ QFFILSPRGD IISKD+RGD + FF K VKFWE GD PP F +DGVNYIY+R++ LL A +T+ NVSP+ LELLNR+AKV KDYCGVL+EEAIR NF L+YELLDE LDYGYPQ TSTETL+N V N+ ++V+ ++ + ++ T KT PS + PV+ G ++ Q+NEI+VDI+E+L+VLF+ +G VVNSSIDG IQMKS+LSGNPELRLALNEDLV+GK GS++GSVV+DDCNFHEC +LDEFE+ R L F PPDGEF +LNYRI +FR PFRLFPS+ + PY+++V+ +VRA++PE G VV+ +P+PR SVS E+ +PG +AE+ ++ +V WTI+K G+SEL +R K+TL AA+++E+GP++MQFEIPMYNVSNLQV+YL+I+E KSYNP+RWVRY+T SSSYVCR
Sbjct: 3 IGQFFILSPRGDCIISKDFRGDEHPTMHEDFFHK------------VKFWEKGDAPPIFFLDGVNYIYIRRSSLLLACTTRMNVSPASILELLNRVAKVVKDYCGVLTEEAIRCNFSLIYELLDEMLDYGYPQNTSTETLKNFVHNDAVIVNQQTVALNIMQSIGTGKTKPSIASNLPVA-LGSRSSKQKNEIYVDIVEKLTVLFNSNGVVVNSSIDGAIQMKSFLSGNPELRLALNEDLVIGK---GSTYGSVVMDDCNFHECVRLDEFEASRTLHFVPPDGEFTVLNYRITGDFRSPFRLFPSIEETGPYKLDVLCLVRAEIPEGNHGAGVVINIPVPRATASVSFEMSVNMPGSSAEFISSSKKVQWTIRKMVGASELAIRCKLTLDQPATAAHKREIGPIAMQFEIPMYNVSNLQVKYLRISETHKSYNPYRWVRYITLSSSYVCR 436
BLAST of mRNA_Ecto-sp13_S_contig1840.5720.1 vs. uniprot
Match: A0A7S1C3I7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3I7_9STRA) HSP 1 Score: 526 bits (1355), Expect = 1.020e-178 Identity = 269/469 (57.36%), Postives = 353/469 (75.27%), Query Frame = 1
Query: 7 IAPVSQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKASRNTTFARIENVKFWEGGDPPPCFTIDGVNYIYVRKNGLLFAVSTQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDS--VKSMRLPSALKTKTAPSSSIQKPVSGSGQKNGSQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKANAGSSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVGDIDPYRMEVVVIVRADMPETAAGTNVVVRVPMPRNAVSVSSEV--ESRVPG-------------QTAEYSANEHRVVWTIKKFQGSSELTLRAKVTLPNVVNAANRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCRV 1362
+A + QFFILSPRGDTIISK YRGD VAGT++ FFRK VKFW+G D PP F IDG+N++++++NGL F +T++NVSPSM +ELL+R+AKVFKDYCGVLSEE+IRKNFILVYELLDE +DYGY QGT+TETL+ +V NEPI++ S +LP+ KT +S++ P+S +G++ G ++NEIFVDILERL+VLF+ +G V+NS+IDG IQMKSYL+GNP LR+ALNEDLVVGK G+ +G+VVLDDCNFHE LDEFE + ++ PP+GEFV++NYRI ++FR PFR+FP V + PY++E+V+ VRAD+P ++ G NV+VR P+PR + +V+ E+ S+ G + AEY + V+W IKKFQG +E TLR K+TL + RKE+GP+S+ FEIPMYNVS+LQV+YL+IAE +KSY P RWVRYVTQSSSYVCR+
Sbjct: 41 VAMIGQFFILSPRGDTIISKQYRGDVVAGTSEIFFRK------------VKFWKG-DAPPVFVIDGINFLFIKRNGLYFVATTRFNVSPSMTIELLDRVAKVFKDYCGVLSEESIRKNFILVYELLDELVDYGYAQGTTTETLKAYVYNEPIVLASGGAGGFKLPTGGSGKTKSASAVHAPISLAGRRKG-KKNEIFVDILERLTVLFNSNGYVLNSTIDGSIQMKSYLTGNPPLRIALNEDLVVGKGGGGA-YGAVVLDDCNFHEVVNLDEFEDSKVMTLVPPEGEFVVMNYRITSDFRAPFRVFPFVEETSPYKVELVLKVRADIPASSYGANVLVRFPVPRTSATVTPEIGPSSQAVGTAAAGGADAGGSAEQAEYRGKDKEVLWLIKKFQGGTEHTLRTKITLSAPSTTSIRKEIGPISLNFEIPMYNVSSLQVKYLRIAEASKSYKPHRWVRYVTQSSSYVCRL 494
BLAST of mRNA_Ecto-sp13_S_contig1840.5720.1 vs. uniprot
Match: A0A2R5G7K4_9STRA (AP-4 complex subunit mu n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G7K4_9STRA) HSP 1 Score: 523 bits (1346), Expect = 5.060e-178 Identity = 268/457 (58.64%), Postives = 347/457 (75.93%), Query Frame = 1
Query: 16 VSQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKASRNTTFARIENVKFWEG---GDPPPCFTIDGVNYIYVRKNGLLFAVSTQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVK---SMRLPSALKTKTAPSSSIQKPVSGSGQKNGSQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKANAGSSFG-SVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVGDIDPYRMEVVVIVRADMPETAAGTNVVVRVPMPRNAVSVSSEVES--RVPGQTAEYSANEHRVVWTIKKFQGSSELTLRAKVTLPNVVNAANRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCR 1359
VSQF+ILSPRGDTIIS+++R D GT + FF +VKFW+G + PPCF IDGVNYI+++++GL F +T++NVSP+ LELL RLAK+FKDYCGVLSEEAIRKNF+L+YELLDE LDYGYP +STE L+ HV NEP++VD +K S ++P+ + KT PSSS+ KPV+ + K+G QRNEIFVDILERL++LF+ +G ++S IDG I MKSYLSGNP LRLALNEDLVVGK + +++G SVVLDDCNFHEC +LD+FESMR L+F PPDGEFVL+NYRI ++F PFR++P V + ++E+VV +RAD+P+ G NV +P+P + VSS ++S GQTAEY A +H+VVWTIKKFQG +E TLRAKV L ++ A R+E+GP+S+ FEIPM+N S LQV+YL+I E ++YNP RWVRYV+QS+SYV R
Sbjct: 4 VSQFYILSPRGDTIISRNFRSDVDKGTAEVFFH------------SVKFWKGDGGNEAPPCFNIDGVNYIFIKQSGLYFVCTTKYNVSPNFALELLARLAKLFKDYCGVLSEEAIRKNFVLIYELLDEVLDYGYPMVSSTEQLKVHVHNEPVMVDMIKQANSFKMPT-MNQKTTPSSSVYKPVTLAA-KSGQQRNEIFVDILERLTMLFNGNGYTLSSHIDGSIVMKSYLSGNPPLRLALNEDLVVGKGSEAANYGGSVVLDDCNFHECVRLDDFESMRLLNFVPPDGEFVLMNYRITSDFVAPFRIYPHVEENSSTQIEIVVKIRADLPQNNFGVNVQATMPVPTRSNGVSSRLDSGAAAAGQTAEYRAKDHKVVWTIKKFQGGAEHTLRAKVDLKEPMSPAIRREIGPISLSFEIPMFNASQLQVKYLRIVEQHRTYNPHRWVRYVSQSASYVSR 446 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1840.5720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1840.5720.1 >prot_Ecto-sp13_S_contig1840.5720.1 ID=prot_Ecto-sp13_S_contig1840.5720.1|Name=mRNA_Ecto-sp13_S_contig1840.5720.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=455bp MSIAPVSQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKASRNTTFARIEback to top mRNA from alignment at Ecto-sp13_S_contig1840:7809..14945+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1840.5720.1 ID=mRNA_Ecto-sp13_S_contig1840.5720.1|Name=mRNA_Ecto-sp13_S_contig1840.5720.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7137bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1840:7809..14945+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1840:7809..14945+ >mRNA_Ecto-sp13_S_contig1840.5720.1 ID=mRNA_Ecto-sp13_S_contig1840.5720.1|Name=mRNA_Ecto-sp13_S_contig1840.5720.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1365bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1840:7809..14945+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |