prot_Ecto-sp13_S_contig18394.5715.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18394.5715.1
Unique Nameprot_Ecto-sp13_S_contig18394.5715.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length291
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18394.5715.1 vs. uniprot
Match: A0A6H5J5T1_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5T1_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 3.770e-76
Identity = 228/315 (72.38%), Postives = 232/315 (73.65%), Query Frame = 0 
Query:    1 LIDYGSAAKGVYRFARTYGFVNFRHTTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNGEPXXXXXXXXXXXXNRGRRQSGGIPSGSDSLLVHVGLSPLAGQEQKEHQQQRQLVVPVRLADVAXXXXXXXDEQALQEPSRRLLRPETDQR--AADGFSGAVAATA-FAAGAKAAQPGAGAAVAAAEVEALEERLRRYPTTCQEDLESLGLVASDGTEEDNSADGTGGTW----------------------ASGPVTAEWAETCISLRAAEKIALQRALRAARMPR 290
            LIDYGSAAKG YRFARTYGFVNFR TTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                            NRGRR  GGIPSGSDSL VHVGLS  AGQEQKE        VPVRLADVAXXXXX  +EQ L+EP+RRLL PETDQ   AAD FSGAVAATA FAAGA+AAQPG   AVAAAEVEALEERLRRYPTT QEDLE LGLVASDGTEEDNSADGTGGT                       ASG VTAEWAETCISLRAAEKIALQRALR AR PR
Sbjct:  320 LIDYGSAAKGAYRFARTYGFVNFRQTTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------NRGRRLIGGIPSGSDSLRVHVGLSSPAGQEQKEXX--XXXXVPVRLADVAXXXXXTFEEQVLEEPNRRLLSPETDQEGEAADVFSGAVAATAKFAAGARAAQPGTRVAVAAAEVEALEERLRRYPTTWQEDLELLGLVASDGTEEDNSADGTGGTRRPQTEKTSAAAGAKGAALKAGAASGAVTAEWAETCISLRAAEKIALQRALRTARRPR 604
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18394.5715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J5T1_9PHAE3.770e-7672.38SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18394contigEcto-sp13_S_contig18394:3..941 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18394.5715.1mRNA_Ecto-sp13_S_contig18394.5715.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18394 3..941 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18394.5715.1 ID=prot_Ecto-sp13_S_contig18394.5715.1|Name=mRNA_Ecto-sp13_S_contig18394.5715.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=291bp
LIDYGSAAKGVYRFARTYGFVNFRHTTGGGGGSSSSNSSSSSNSSSSSNS
SSSSNSSSSSSSNSSSSNSSSSSSSSSSSSSSNASDNGEPSNDGGDDGSD
GGNRGRRQSGGIPSGSDSLLVHVGLSPLAGQEQKEHQQQRQLVVPVRLAD
VAAAAAAASDEQALQEPSRRLLRPETDQRAADGFSGAVAATAFAAGAKAA
QPGAGAAVAAAEVEALEERLRRYPTTCQEDLESLGLVASDGTEEDNSADG
TGGTWASGPVTAEWAETCISLRAAEKIALQRALRAARMPR*
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