prot_Ecto-sp13_S_contig18392.5713.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18392.5713.1
Unique Nameprot_Ecto-sp13_S_contig18392.5713.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length184
Homology
BLAST of mRNA_Ecto-sp13_S_contig18392.5713.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 3.070e-105
Identity = 168/184 (91.30%), Postives = 177/184 (96.20%), Query Frame = 0
Query:    1 TTWTSSGTTNGFESIALPDTASGTVIELRGVLDDSEWLSIIETEIMVWPQNVVTPPPAPAATVPPATAPVQPVTPPSPTSAGDLQPVGLTPLAIGDESPIDRYGTKDGDFTTSWTCTGDATEPNDEGITYYQCELLFGLVYYRHIKQVKIALADGAQRSVDMRLAGRFASSIAEEFVTSSGATD 184
            TTWTSSGTTNGFESIALPDTASGTV+EL+GVLDDSEWLSIIETEIMVWPQNVVTPPPAPAATVPPATAPVQPVTPPSP  A DLQPVGLTPLAIG+ESP+DRY TKDGDFTTSWTCTGD TEPNDEGITYYQCEL FGLVYYRH+KQVK+ALADGA+RSVDMRLAGRF+SSIAEEFVTSSG T+
Sbjct:  460 TTWTSSGTTNGFESIALPDTASGTVVELQGVLDDSEWLSIIETEIMVWPQNVVTPPPAPAATVPPATAPVQPVTPPSPLPAADLQPVGLTPLAIGNESPLDRYATKDGDFTTSWTCTGDPTEPNDEGITYYQCELFFGLVYYRHVKQVKVALADGAERSVDMRLAGRFSSSIAEEFVTSSGTTN 643          
BLAST of mRNA_Ecto-sp13_S_contig18392.5713.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 3.980e-67
Identity = 127/188 (67.55%), Postives = 141/188 (75.00%), Query Frame = 0
Query:    2 TWTSSGTTNGFESIALPDTASGTVIELRGVLDDSEWLSIIETEIMVWPQNVVTPPPAPAATVP-----PATAPVQPVTPPSPTSAGDLQPVGLTPLAIGDESPIDRYGTKDGDFTTSWTCTGDATEPNDEGITYYQCELLFGLVYYRHIKQVKIALADGAQRSVDMRLAGRFASSIAEEFVTSSGATD 184
            TWTSSGTT+GFESIA PD  SGTVI L+GVLDDSEWLSIIETEIMVWPQNVVTPPP PA T       PAT      T P PT  GDLQPVGL PLA GD S +DR   KDGD +TSWTCTGD  E + +GI YY+C LLF LVY RHIKQVKIALADGA+R+VDM ++  + ++  EE VTSSG TD
Sbjct:  342 TWTSSGTTDGFESIAFPDGVSGTVINLQGVLDDSEWLSIIETEIMVWPQNVVTPPPTPATTAXXXXXQPAT------TSPIPTPVGDLQPVGLIPLATGDGSLLDRCAAKDGDLSTSWTCTGDPREVSPQGILYYECSLLFDLVYTRHIKQVKIALADGAERAVDMSISRGYGTT-PEELVTSSGTTD 522          
BLAST of mRNA_Ecto-sp13_S_contig18392.5713.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 1.400e-40
Identity = 100/193 (51.81%), Postives = 119/193 (61.66%), Query Frame = 0
Query:    1 TTWTSSGTTNGFESIALPDTASGTVIELRGVLDDSEWLSIIETEIMVWPQNVVTPPPAPAATVPPATAPVQPVTPPSPTSAGDLQPVGLTPLA-----IGDESPIDRYGTKDGDFTTSWTCTGDATEPNDEGITYYQCELLFGLVYYRHIKQVKIALADGAQRSVDMRLAGRF----ASSIAEEFVTSSGATD 184
            TTWTSSGTT G ESI   DT SG V+E+ GVL DSEWLSIIET I VWP    TP    +    PA AP+ PV        G+L  VGL PLA      G++ P   + +KDGDF+TSWTC G             +C L F L  +RHIKQVKIAL DGA+R+VDMR+AGR+    A++ AE +VTSSG TD
Sbjct:  466 TTWTSSGTTVGAESILFSDTTSGQVVEVTGVLGDSEWLSIIETLIYVWPDTAPTPSTTGST---PAPAPITPV--------GELTAVGLLPLADCTGCFGEDLP--PFHSKDGDFSTSWTCVGGT-----------ECTLRFDLFSWRHIKQVKIALPDGAERAVDMRIAGRYDDELAAAFAEAYVTSSGTTD 634          
BLAST of mRNA_Ecto-sp13_S_contig18392.5713.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 1.910e-40
Identity = 93/183 (50.82%), Postives = 115/183 (62.84%), Query Frame = 0
Query:    2 TWTSSGTTNGFESIALPDTASGTVIELRGVLDDSEWLSIIETEIMVWPQNVVTPPPAPAATVPPATAPVQPVTPPSPTSAGDLQPVGLTPLAIGDESPIDRYGTKDGDFTTSWTCTGDATEPNDEGITYYQCELLFGLVYYRHIKQVKIALADGAQRSVDMRLAGRFASSIAEEFVTSSGATD 184
            TWTSSGTT+GFE+I +  T SG V+E+ GVLDDSEWLSIIE EIM+         P P                   ++ G LQPVGL PLA    + +++Y  KDGD +TSWTC+GD  E +D    YY C L F +  +RHIKQVKIAL DGA+R+VDMR+A  + +S  E FVTSSG TD
Sbjct:  453 TWTSSGTTDGFEAIDMSGT-SGQVLEITGVLDDSEWLSIIEAEIMLLEDGAS---PTPTTXXXXXXXXXXXXXXXXXSTTGTLQPVGLIPLASTGGTSLEKYHIKDGDMSTSWTCSGDPQEADDP---YYDCILQFNMFSHRHIKQVKIALPDGAERAVDMRIAAPYDASFGEVFVTSSGTTD 628          
BLAST of mRNA_Ecto-sp13_S_contig18392.5713.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 2.280e-37
Identity = 95/187 (50.80%), Postives = 116/187 (62.03%), Query Frame = 0
Query:    1 TTWTSSGTTNGFESIALPDTASGTVIELRGVLDDSEWLSIIETEIMVWPQNVVTPPPAPAATVPPATAPVQPVTPPSPTSAGDLQPVGLTPLAIGDESPIDRYGTKDGDFTTSWTCTGDATEPNDEGITYYQCELLFGLVYYRHIKQVKIALADGAQRSVDMRLAGRFASSIA---EEFVTSSGATD 184
            TTWTSSGTT+GFE+I L  T  G V+E+ GVLDDSEWLSIIE EIMV         P P                   ++ G LQPVGL PLA    + ++RY  KDGD +TSWTC+G+  E  D   T Y C L F +  +R+IKQVKIAL DGA+R+VDMR+A  ++S+ A   E FVTSSG TD
Sbjct:  265 TTWTSSGTTDGFEAIDLSGTW-GQVLEITGVLDDSEWLSIIEAEIMVLEDGAS---PMPTTPXXXXXXXXXXXXXXXTSTTGTLQPVGLIPLASTGGTSLERYHVKDGDMSTSWTCSGNPQETAD---TSYDCILQFSMFCHRNIKQVKIALPDGAERAVDMRIAAPYSSNSASFEEIFVTSSGTTD 444          
BLAST of mRNA_Ecto-sp13_S_contig18392.5713.1 vs. uniprot
Match: D7FL48_ECTSI (Leucine rich repeat carbohydrate binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL48_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 3.610e-9
Identity = 41/74 (55.41%), Postives = 51/74 (68.92%), Query Frame = 0
Query:    1 TTWTSSGTTNGFESIALPDTASGTVIELRGV-LDDSEWLSIIETEIMVWPQNVVTPPPAPAA------TVPPAT 67
            TTWTSSGTT+GFES+ +   A+G V+ + G  L DSEWLSI+ETEIMV+  N V PPP+P        T+PP T
Sbjct:  275 TTWTSSGTTSGFESVDMSG-ATGQVVTITGAELSDSEWLSIVETEIMVY--NGVAPPPSPTTPATPSPTLPPTT 345          
BLAST of mRNA_Ecto-sp13_S_contig18392.5713.1 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.190e-6
Identity = 31/47 (65.96%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 TTWTSSGTTNGFESIALPDTASGTVIELRGVLDDSEWLSIIETEIMV 47
            TTWTSSGTT GFES+ L D   G V+EL G L+D EWLSI+E EI V
Sbjct:  123 TTWTSSGTTTGFESVLLMD--QGQVVELVGDLNDDEWLSILEVEIDV 167          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18392.5713.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KFA6_9PHAE3.070e-10591.30F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
D7FZZ4_ECTSI3.980e-6767.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KL74_9PHAE1.400e-4051.81F5/8 type C domain-containing protein n=3 Tax=Ecto... [more]
D7FTH1_ECTSI1.910e-4050.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KH45_9PHAE2.280e-3750.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL48_ECTSI3.610e-955.41Leucine rich repeat carbohydrate binding protein n... [more]
A0A6H5L1V3_9PHAE1.190e-665.96F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18392contigEcto-sp13_S_contig18392:1142..2941 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18392.5713.1mRNA_Ecto-sp13_S_contig18392.5713.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18392 1142..2942 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18392.5713.1 ID=prot_Ecto-sp13_S_contig18392.5713.1|Name=mRNA_Ecto-sp13_S_contig18392.5713.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=184bp
TTWTSSGTTNGFESIALPDTASGTVIELRGVLDDSEWLSIIETEIMVWPQ
NVVTPPPAPAATVPPATAPVQPVTPPSPTSAGDLQPVGLTPLAIGDESPI
DRYGTKDGDFTTSWTCTGDATEPNDEGITYYQCELLFGLVYYRHIKQVKI
ALADGAQRSVDMRLAGRFASSIAEEFVTSSGATD
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