prot_Ecto-sp13_S_contig18391.5712.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18391.5712.1
Unique Nameprot_Ecto-sp13_S_contig18391.5712.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length209
Homology
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: D7FQB8_ECTSI (Folate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB8_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 1.210e-85
Identity = 129/139 (92.81%), Postives = 134/139 (96.40%), Query Frame = 0
Query:    1 MKNVFRARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKNGGVRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQVI 139
            +K   RARVPQ+ADLG VHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAK+GGVRPYSGL+DAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQ +
Sbjct:  123 IKTAIRARVPQEADLGAVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKSGGVRPYSGLMDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQYL 261          
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: A0A835YH58_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH58_9STRA)

HSP 1 Score: 206 bits (523), Expect = 3.640e-62
Identity = 112/196 (57.14%), Postives = 139/196 (70.92%), Query Frame = 0
Query:   14 DLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDK-KAKNGGVRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKR-NENTPQESLLMGGASKILSTLVTYPTQVIKSRLQQRGTA--EETQAGSSRYRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVYEEVLK 205
             L   HHL AG +    +VL  NPVW++KTR+QLQ +   +  G RPY G  DA+ TI REEG LALYKG VPA++L  QGA+QFA YEWLK  VP+   ++ P ESL+MGG SKI +++VTYPTQVIK+RLQ R  A      AG S Y GT  CA+ I R+EG RGFF+GCV +A+RAAPASA+TFVVYEE ++
Sbjct:  142 QLNVSHHLTAGNI----LVLLGNPVWLVKTRLQLQTRDNTQRLGRRPYRGFTDALVTIAREEGALALYKGIVPAMLLSTQGALQFAAYEWLKGWVPRDLQQSKPVESLVMGGGSKIFASVVTYPTQVIKTRLQDRAAAAVSAAAAGRSIYTGTAQCAALIWRQEGARGFFRGCVPYALRAAPASAVTFVVYEEAMR 333          
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: B5YLY4_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLY4_THAPS)

HSP 1 Score: 169 bits (429), Expect = 1.010e-48
Identity = 98/201 (48.76%), Postives = 122/201 (60.70%), Query Frame = 0
Query:   21 LGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAK------NGGVR--PYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQES------LLMGGASKILSTLVTYPTQVIKSRLQQRGTAEETQAGSSRYRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVYEEVLKAL 207
            L    ++GA MV  TNP+W+IKTR+QLQ+ + +      NG     PY GL+ A  TI +EEG LALYKG+VPALML   G +QF  YEWLK      N    +        L+MG  SK +++  TYP QVIK+RLQQR   E        Y G + C  +I R EGV GFFKGCV +A+R AP++AITFVVYE VL AL
Sbjct:   95 LDTSCLSGACMVALTNPLWLIKTRLQLQNSRLQQQLSQPNGPPLKPPYRGLVHAAFTIVKEEGVLALYKGSVPALMLVSHGGIQFVSYEWLKGHFAAWNRTIGERLRASFGYLVMGATSKFIASTTTYPLQVIKARLQQRSQRE--------YSGVIDCVGKIWRNEGVGGFFKGCVTNALRVAPSAAITFVVYESVLDAL 287          
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: A0A7S4JAZ4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAZ4_9STRA)

HSP 1 Score: 173 bits (438), Expect = 1.430e-48
Identity = 110/236 (46.61%), Postives = 132/236 (55.93%), Query Frame = 0
Query:   11 QDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKK-----------AKNGG--VRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKAR-------VPKRNENTPQES-------------LLMGGASKILSTLVTYPTQVIKSRLQQRGTAEE-TQAGS-----SRYRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVYEEVLKAL 207
            +   LG + +  A   AGA MVL TNPVW+IKTRMQLQ K+           AK G     PY  + DA RTI REEGPLALYKGAVPALML   G VQF  YE+LK            R +   QE              L MG  SK++++  TYP QVIK+RLQQR  + E T+AG        Y G   C + I R EG  GFFKGC+ +AVR AP++AITFV+YE V+  L
Sbjct:  195 EHCSLGPMENFSAACAAGAAMVLVTNPVWLIKTRMQLQMKRTLERNKDCIRGAKGGADVKPPYRSMADAARTIVREEGPLALYKGAVPALMLVSHGGVQFVSYEFLKEHFGTYTRAARSRKDEAGQERNGTMEKLQDSLGYLAMGAVSKMIASTATYPLQVIKARLQQRNQSVELTEAGDLAVVRREYGGVADCVARIFRNEGPVGFFKGCIPNAVRVAPSAAITFVMYETVMDML 430          
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: FOLT1_ARATH (Folate transporter 1, chloroplastic n=35 Tax=Brassicaceae TaxID=3700 RepID=FOLT1_ARATH)

HSP 1 Score: 169 bits (428), Expect = 2.380e-48
Identity = 96/212 (45.28%), Postives = 133/212 (62.74%), Query Frame = 0
Query:    7 ARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKNGGVRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARV----PKRNENTPQESLL-------MGGASKILSTLVTYPTQVIKSRLQQRGTAEETQAGSSRYRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVYEEVLKAL 207
            AR   D  L    HL +   AGA++ L TNP+W++KTR+QLQ    +    +PYSGL+DA RTI +EEGP ALYKG VP L+L   GA+QF  YE L+  +     +R ++   ++LL       +GG+SK+ + L+TYP QVI++RLQQR +      G  RY  +LH   E  R EG+RGF++G  A+ ++  PAS+ITF+VYE VLK L
Sbjct:   96 ARGRDDEKLSPALHLASAAEAGALVCLCTNPIWLVKTRLQLQTPLHQT---QPYSGLLDAFRTIVKEEGPRALYKGIVPGLVLVSHGAIQFTAYEELRKIIVDLKERRRKSESTDNLLNSADYAALGGSSKVAAVLLTYPFQVIRARLQQRPSTN----GIPRYIDSLHVIRETARYEGLRGFYRGLTANLLKNVPASSITFIVYENVLKLL 300          
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: A0A6J0K2M2_RAPSA (folate transporter 1, chloroplastic isoform X3 n=6 Tax=Brassiceae TaxID=981071 RepID=A0A6J0K2M2_RAPSA)

HSP 1 Score: 167 bits (423), Expect = 1.370e-47
Identity = 96/213 (45.07%), Postives = 132/213 (61.97%), Query Frame = 0
Query:    7 ARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKNGGVRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARV-----PKRNENTPQESLL-------MGGASKILSTLVTYPTQVIKSRLQQRGTAEETQAGSSRYRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVYEEVLKAL 207
            AR   D  L    HL +   AGA++   TNP+W++KTR+QLQ    +     PYSGL+DA RTI +EEGP ALYKG +PAL+L   GA+QF  YE L+  +      +RN  +  ++LL       +GG+SK+ + L+TYP QVI++RLQQR +      G  RY  +LH   E  R EG+RGF++G  A+ ++  PAS+ITF+VYE VLK L
Sbjct:   98 ARGRDDDKLTPPLHLASAAEAGALVCFCTNPIWLVKTRLQLQTPLHQTP---PYSGLLDAFRTIIKEEGPRALYKGILPALLLVSHGAIQFTAYEELRKLIVDFKDKRRNSESTSDNLLNSADYAALGGSSKVAAVLLTYPFQVIRARLQQRPSTN----GVPRYIDSLHVIRETARFEGLRGFYRGLTANLLKNVPASSITFIVYENVLKLL 303          
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: B7FQZ1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQZ1_PHATC)

HSP 1 Score: 165 bits (417), Expect = 1.050e-46
Identity = 95/207 (45.89%), Postives = 123/207 (59.42%), Query Frame = 0
Query:    5 FRARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKNG-GVRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQVIKSRLQQRGTAEE-TQAGSSR-----YRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVYEEVL 204
            F+ ++     L ++ +      AG +MVL TNP+W+IK RMQLQ K+A     ++PY  + DAV TI REEGPLALYKG  PAL+L   G VQF VYE+LK     +  N  +      G +K L   VTYP Q IK+R+QQR  A E T  G  R     YRG       + R+EG  GFFKGC+ +A+R AP +AITFVVYE ++
Sbjct:   98 FKKQLSASDVLSSLDNFALACTAGGVMVLMTNPIWLIKIRMQLQMKRASELLNIKPYRNIGDAVATIVREEGPLALYKGVGPALLLTSHGGVQFVVYEYLKKHFRFQRINREETGRATQGITKRLQNTVTYPLQTIKARMQQRSDALEFTADGEVRAVRRDYRGLFSTIKRVFRQEGFVGFFKGCIPNAIRVAPGAAITFVVYEALM 304          
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: UPI000A29C377 (folate transporter 1, chloroplastic isoform X3 n=2 Tax=Brassicaceae TaxID=3700 RepID=UPI000A29C377)

HSP 1 Score: 160 bits (405), Expect = 1.600e-45
Identity = 95/213 (44.60%), Postives = 132/213 (61.97%), Query Frame = 0
Query:    7 ARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKNGGVRPYSGLIDAVRTITREEGPLALYKGAVPALML-CGQGAVQFAVYEWLKARV----PKRNENTPQESLL-------MGGASKILSTLVTYPTQVIKSRLQQRGTAEETQAGSSRYRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVYEEVLKAL 207
            AR   D  L    HL +   AGA++ L TNP+W++KTR+QLQ    +    + YSGL+DA RTI +EEGP ALYKG VP L+L    GA+QF  YE L+  +     +R ++   ++LL       +GG+SK+ + L+TYP QVI++RLQQR +      G  RY  +LH   E  R EG+RGF++G  A+ ++  PAS+ITF+VYE VLK L
Sbjct:   43 ARGRDDEKLSPGLHLASAAEAGALVCLCTNPIWLVKTRLQLQTPLYQT---QQYSGLLDAFRTIVKEEGPRALYKGIVPGLVLQVSHGAIQFTAYEELRKIIVDWKERRRKSESADNLLNSADYAALGGSSKVAAVLLTYPFQVIRARLQQRPSTN----GIPRYIDSLHVIRETARYEGLRGFYRGLTANLLKNVPASSITFIVYENVLKLL 248          
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: A0A6J0JZZ2_RAPSA (folate transporter 1, chloroplastic isoform X1 n=4 Tax=Brassiceae TaxID=981071 RepID=A0A6J0JZZ2_RAPSA)

HSP 1 Score: 161 bits (408), Expect = 2.660e-45
Identity = 97/217 (44.70%), Postives = 133/217 (61.29%), Query Frame = 0
Query:    7 ARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKNGGVRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQ----GAVQFAVYEWLKARV-----PKRNENTPQESLL-------MGGASKILSTLVTYPTQVIKSRLQQRGTAEETQAGSSRYRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVYEEVLKAL 207
            AR   D  L    HL +   AGA++   TNP+W++KTR+QLQ    +     PYSGL+DA RTI +EEGP ALYKG +PAL+L  Q    GA+QF  YE L+  +      +RN  +  ++LL       +GG+SK+ + L+TYP QVI++RLQQR +      G  RY  +LH   E  R EG+RGF++G  A+ ++  PAS+ITF+VYE VLK L
Sbjct:   98 ARGRDDDKLTPPLHLASAAEAGALVCFCTNPIWLVKTRLQLQTPLHQTP---PYSGLLDAFRTIIKEEGPRALYKGILPALLLFLQQVSHGAIQFTAYEELRKLIVDFKDKRRNSESTSDNLLNSADYAALGGSSKVAAVLLTYPFQVIRARLQQRPSTN----GVPRYIDSLHVIRETARFEGLRGFYRGLTANLLKNVPASSITFIVYENVLKLL 307          
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: A0A7S2KIX9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KIX9_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.660e-45
Identity = 102/262 (38.93%), Postives = 133/262 (50.76%), Query Frame = 0
Query:    3 NVFRARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKA---------------------------KNGGVRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVP---------------KRNENTP-----QES---LLMGGASKILSTLVTYPTQVIKSRLQQRGTAEETQAGSSR-------YRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVYEEVLKAL 207
            N+ +    +   LG + H  A  +AGA MV+ TNP+W+IKTR+QLQ+ K                            K     PY GLI A  TI +EEG LALYKG++PA+ML   G +QF  YE+LK                   +R   TP     ++S   L+MG ASK +++ +TYP QVIK+RLQQR    E    +         Y G   C   I R EG+ GFFKGCV +A+R AP++AITFV YE VL  L
Sbjct:   48 NITQQSKEEKITLGPLEHFSASCLAGACMVVCTNPIWLIKTRLQLQNSKLHQQLSTPXXXXXXXXXXXXXXXAQQVPKQQVKPPYRGLIHAAYTIVKEEGILALYKGSIPAMMLVSHGGIQFVAYEFLKGHFANFTNNNANNQWKKGERRGAGTPIGERLRDSCGYLVMGAASKFIASTITYPIQVIKTRLQQRSQVVEFSEATGEIIVTKREYAGVADCVGRIWRNEGIVGFFKGCVTNAIRVAPSAAITFVTYEFVLDVL 309          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB8_ECTSI1.210e-8592.81Folate transporter n=1 Tax=Ectocarpus siliculosus ... [more]
A0A835YH58_9STRA3.640e-6257.14Mitochondrial carrier domain-containing protein n=... [more]
B5YLY4_THAPS1.010e-4848.76Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S4JAZ4_9STRA1.430e-4846.61Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
FOLT1_ARATH2.380e-4845.28Folate transporter 1, chloroplastic n=35 Tax=Brass... [more]
A0A6J0K2M2_RAPSA1.370e-4745.07folate transporter 1, chloroplastic isoform X3 n=6... [more]
B7FQZ1_PHATC1.050e-4645.89Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
UPI000A29C3771.600e-4544.60folate transporter 1, chloroplastic isoform X3 n=2... [more]
A0A6J0JZZ2_RAPSA2.660e-4544.70folate transporter 1, chloroplastic isoform X1 n=4... [more]
A0A7S2KIX9_9STRA2.660e-4538.93Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 15..109
e-value: 1.3E-21
score: 76.3
coord: 114..207
e-value: 1.6E-22
score: 79.2
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 113..206
score: 24.787
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 15..106
score: 23.092
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10coord: 1..208
e-value: 5.0E-56
score: 191.5
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 11..202
NoneNo IPR availablePANTHERPTHR45683FAMILY NOT NAMEDcoord: 2..207
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..208
NoneNo IPR availableTMHMMTMhelixcoord: 21..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18391contigEcto-sp13_S_contig18391:1083..3397 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18391.5712.1mRNA_Ecto-sp13_S_contig18391.5712.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18391 351..3467 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18391.5712.1 ID=prot_Ecto-sp13_S_contig18391.5712.1|Name=mRNA_Ecto-sp13_S_contig18391.5712.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=209bp
MKNVFRARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDK
KAKNGGVRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVY
EWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQVIKSRLQQRGTAE
ETQAGSSRYRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVY
EEVLKALA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom_sf