mRNA_Ecto-sp13_S_contig18391.5712.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18391.5712.1
Unique NamemRNA_Ecto-sp13_S_contig18391.5712.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: D7FQB8_ECTSI (Folate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB8_ECTSI)

HSP 1 Score: 313 bits (803), Expect = 1.400e-101
Identity = 152/162 (93.83%), Postives = 157/162 (96.91%), Query Frame = 2 
Query:    2 QGLGPALLGNAVAWGGFFYCYEKMKNVFRARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKNGGVRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQVI 487
            QGLGPALLGNAVAWGGFFYCYEK+K   RARVPQ+ADLG VHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAK+GGVRPYSGL+DAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQ +
Sbjct:  100 QGLGPALLGNAVAWGGFFYCYEKIKTAIRARVPQEADLGAVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKSGGVRPYSGLMDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQYL 261
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: A0A835YH58_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH58_9STRA)

HSP 1 Score: 229 bits (583), Expect = 1.800e-67
Identity = 123/231 (53.25%), Postives = 158/231 (68.40%), Query Frame = 2 
Query:    5 GLGPALLGNAVAWGGFFYCYEKMKNVFRARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDK-KAKNGGVRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKR-NENTPQESLLMGGASKILSTLVTYPTQVIKSRLQQRGTA--EETQAGSSRYRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVYEEVLK 685
            GL P++ G  +AWG +FY Y+  K+  +     +  L   HHL AG +    +VL  NPVW++KTR+QLQ +   +  G RPY G  DA+ TI REEG LALYKG VPA++L  QGA+QFA YEWLK  VP+   ++ P ESL+MGG SKI +++VTYPTQVIK+RLQ R  A      AG S Y GT  CA+ I R+EG RGFF+GCV +A+RAAPASA+TFVVYEE ++
Sbjct:  108 GLVPSVWGGGLAWGAYFYLYQMSKDALQTGTGAE-QLNVSHHLTAGNI----LVLLGNPVWLVKTRLQLQTRDNTQRLGRRPYRGFTDALVTIAREEGALALYKGIVPAMLLSTQGALQFAAYEWLKGWVPRDLQQSKPVESLVMGGGSKIFASVVTYPTQVIKTRLQDRAAAAVSAAAAGRSIYTGTAQCAALIWRQEGARGFFRGCVPYALRAAPASAVTFVVYEEAMR 333
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: B5YLY4_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLY4_THAPS)

HSP 1 Score: 202 bits (515), Expect = 3.980e-58
Identity = 116/244 (47.54%), Postives = 148/244 (60.66%), Query Frame = 2 
Query:    2 QGLGPALLGNAVAWGGFFYCYEKMKNVFRARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAK------NGGVR--PYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQES------LLMGGASKILSTLVTYPTQVIKSRLQQRGTAEETQAGSSRYRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVYEEVLKAL 691
            +GL PA++G+A +WGGFF  YE+MK V   R  + A+      L    ++GA MV  TNP+W+IKTR+QLQ+ + +      NG     PY GL+ A  TI +EEG LALYKG+VPALML   G +QF  YEWLK      N    +        L+MG  SK +++  TYP QVIK+RLQQR   E        Y G + C  +I R EGV GFFKGCV +A+R AP++AITFVVYE VL AL
Sbjct:   56 KGLTPAIIGSAASWGGFFILYEEMKQVMLQRKIKFANAA----LDTSCLSGACMVALTNPLWLIKTRLQLQNSRLQQQLSQPNGPPLKPPYRGLVHAAFTIVKEEGVLALYKGSVPALMLVSHGGIQFVSYEWLKGHFAAWNRTIGERLRASFGYLVMGATSKFIASTTTYPLQVIKARLQQRSQRE--------YSGVIDCVGKIWRNEGVGGFFKGCVTNALRVAPSAAITFVVYESVLDAL 287
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: W7T4J3_9STRA (Mitochondrial folate transporter carrier-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4J3_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.730e-53
Identity = 112/245 (45.71%), Postives = 147/245 (60.00%), Query Frame = 2 
Query:    2 QGLGPALLGNAVAWGGFFYCYEKMKNVFRARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKN--------------------GGVRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQVIKSRLQQRGTAEETQAGSSRYRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVYEE 676
            +GL PALL N ++WGG+FY YE  KN +   + Q   + +VHHL + + AG +MV  TNP+W+IKTRMQLQ   A                      G    Y+G+  A+RTI REEG L LYKG +PAL+L   GA+QF  YEWLK  V          S+L GG +KIL+ LVTYP QV+K+RLQQR    +T A   RY  T  C  +I R EG+ GFFKGC+ + ++ AP++ ITF+VYE+
Sbjct:  134 KGLTPALLANGLSWGGYFYFYEHAKNRY---LRQHRQITSVHHLLSAFEAGIIMVFLTNPLWLIKTRMQLQPGGASALESMTKAVTAPIVASTASHLGKQIAYTGVTQALRTIVREEGVLGLYKGILPALLLTSHGAIQFVTYEWLKKVVEPYQAPVFSFSVL-GGMAKILAGLVTYPPQVVKARLQQR----DTGASRWRYTSTWDCVLKIWRFEGLLGFFKGCLPNVLKTAPSAVITFLVYEQ 370
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: FOLT1_ARATH (Folate transporter 1, chloroplastic n=35 Tax=Brassicaceae TaxID=3700 RepID=FOLT1_ARATH)

HSP 1 Score: 190 bits (483), Expect = 3.570e-53
Identity = 106/240 (44.17%), Postives = 151/240 (62.92%), Query Frame = 2 
Query:    5 GLGPALLGNAVAWGGFFYCYEKMKNVFRARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKNGGVRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARV----PKRNENTPQESLL-------MGGASKILSTLVTYPTQVIKSRLQQRGTAEETQAGSSRYRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVYEEVLKAL 691
            G  PA++G+ V+WG +F+ Y + K  + AR   D  L    HL +   AGA++ L TNP+W++KTR+QLQ    +    +PYSGL+DA RTI +EEGP ALYKG VP L+L   GA+QF  YE L+  +     +R ++   ++LL       +GG+SK+ + L+TYP QVI++RLQQR +      G  RY  +LH   E  R EG+RGF++G  A+ ++  PAS+ITF+VYE VLK L
Sbjct:   69 GFFPAVIGSTVSWGLYFFFYGRAKQRY-ARGRDDEKLSPALHLASAAEAGALVCLCTNPIWLVKTRLQLQTPLHQT---QPYSGLLDAFRTIVKEEGPRALYKGIVPGLVLVSHGAIQFTAYEELRKIIVDLKERRRKSESTDNLLNSADYAALGGSSKVAAVLLTYPFQVIRARLQQRPSTN----GIPRYIDSLHVIRETARYEGLRGFYRGLTANLLKNVPASSITFIVYENVLKLL 300
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: B7FQZ1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQZ1_PHATC)

HSP 1 Score: 190 bits (483), Expect = 3.570e-53
Identity = 107/233 (45.92%), Postives = 141/233 (60.52%), Query Frame = 2 
Query:   14 PALLGNAVAWGGFFYCYEKMKNVFRARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKNG-GVRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQVIKSRLQQRGTAEE-TQAGSSR-----YRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVYEEVLKAL 691
            PA++G+AV+WGG+F+ YE     F+ ++     L ++ +      AG +MVL TNP+W+IK RMQLQ K+A     ++PY  + DAV TI REEGPLALYKG  PAL+L   G VQF VYE+LK     +  N  +      G +K L   VTYP Q IK+R+QQR  A E T  G  R     YRG       + R+EG  GFFKGC+ +A+R AP +AITFVVYE ++  L
Sbjct:   79 PAVIGSAVSWGGYFFFYES----FKKQLSASDVLSSLDNFALACTAGGVMVLMTNPIWLIKIRMQLQMKRASELLNIKPYRNIGDAVATIVREEGPLALYKGVGPALLLTSHGGVQFVVYEYLKKHFRFQRINREETGRATQGITKRLQNTVTYPLQTIKARMQQRSDALEFTADGEVRAVRRDYRGLFSTIKRVFRQEGFVGFFKGCIPNAIRVAPGAAITFVVYEALMDYL 307
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: A0A8J2T2A8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2A8_9STRA)

HSP 1 Score: 189 bits (479), Expect = 8.780e-53
Identity = 108/235 (45.96%), Postives = 143/235 (60.85%), Query Frame = 2 
Query:    2 QGLGPALLGNAVAWGGFFYCYEKMKNVFRARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKNGGVRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQVIKSRLQQRGTAEETQAGSSRYRG----TLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVYEEVLKALA 694
             GL PALLG+A++WGGFFY YE+ K       PQ+A    ++H  A   +GA MVL TNPVW++KTR+QLQ  +        Y G++DA   I +EEG LALY+G +PAL L   GAVQF VYE LK   P   +    E+L+ GG SK+ +   TYP QV+K+R+QQR     +    +   G    TL C  +  R EG+RGFFKGC  +A+R AP++A+TF  YE V+ A A
Sbjct:   69 NGLSPALLGSALSWGGFFYFYERFK-------PQNAS--AMNHAVASIQSGACMVLLTNPVWLVKTRLQLQKDQR-------YKGILDAFSRIIKEEGWLALYRGILPALFLTSHGAVQFVVYEKLKELRPPSTDAGRSEALVYGGVSKLAAATATYPYQVVKTRVQQRYPNTNSNFKGNLPAGEIARTLKCVGDTFRVEGIRGFFKGCWPNALRVAPSAALTFWTYEVVVAAAA 287
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: A0A836CHG8_9STRA (Folate transporter (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG8_9STRA)

HSP 1 Score: 185 bits (469), Expect = 6.010e-52
Identity = 96/167 (57.49%), Postives = 115/167 (68.86%), Query Frame = 2 
Query:    2 QGLGPALLGNAVAWGGFFYCYEKMKNVFRARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKN----GGVRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKR-NENTPQESLLMGGASKILSTLVTYPTQVI 487
             GLGPA+LG+ V+WGG+FY YE  K   R R      LG VHHL AG  AG  +VL TNP+W++KTRMQLQ           G RPY+GL DAV TI REEG LALYKG VPAL+L GQGA+QFA YEWLKARVP+   +N P ESLLMG +SK+ ++LV  P  ++
Sbjct:   58 SGLGPAVLGSGVSWGGYFYLYEWAKTSMR-RFSDTEKLGPVHHLTAGMAAGNALVLLTNPIWLVKTRMQLQQXXXXXXTAAAGRRPYTGLSDAVATIVREEGALALYKGVVPALLLSGQGALQFAAYEWLKARVPRNLAQNDPHESLLMGASSKVFASLVRTPNMLL 223
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: A0A6J0K2M2_RAPSA (folate transporter 1, chloroplastic isoform X3 n=6 Tax=Brassiceae TaxID=981071 RepID=A0A6J0K2M2_RAPSA)

HSP 1 Score: 185 bits (469), Expect = 4.150e-51
Identity = 104/241 (43.15%), Postives = 149/241 (61.83%), Query Frame = 2 
Query:    5 GLGPALLGNAVAWGGFFYCYEKMKNVFRARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKNGGVRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARV-----PKRNENTPQESLL-------MGGASKILSTLVTYPTQVIKSRLQQRGTAEETQAGSSRYRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVYEEVLKAL 691
            G  PA++G+ ++W  +F+ Y + K  + AR   D  L    HL +   AGA++   TNP+W++KTR+QLQ    +     PYSGL+DA RTI +EEGP ALYKG +PAL+L   GA+QF  YE L+  +      +RN  +  ++LL       +GG+SK+ + L+TYP QVI++RLQQR +      G  RY  +LH   E  R EG+RGF++G  A+ ++  PAS+ITF+VYE VLK L
Sbjct:   71 GFFPAVIGSTLSWSLYFFFYGRAKQRY-ARGRDDDKLTPPLHLASAAEAGALVCFCTNPIWLVKTRLQLQTPLHQTP---PYSGLLDAFRTIIKEEGPRALYKGILPALLLVSHGAIQFTAYEELRKLIVDFKDKRRNSESTSDNLLNSADYAALGGSSKVAAVLLTYPFQVIRARLQQRPSTN----GVPRYIDSLHVIRETARFEGLRGFYRGLTANLLKNVPASSITFIVYENVLKLL 303
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Match: A0A7S4JAZ4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAZ4_9STRA)

HSP 1 Score: 186 bits (473), Expect = 2.340e-50
Identity = 128/319 (40.13%), Postives = 158/319 (49.53%), Query Frame = 2 
Query:    2 QGLGPALLGNAVAWGGFFYCYEKMKNVFRAR-------------------------------VPQDADL-------------------GTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKK-----------AKNGG--VRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKAR-------VPKRNENTPQES-------------LLMGGASKILSTLVTYPTQVIKSRLQQRGTAEE-TQAGS-----SRYRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVYEEVLKAL 691
            QGL PAL+G+A +WGG+F+ YE +K  +  R                               V ++ DL                   G + +  A   AGA MVL TNPVW+IKTRMQLQ K+           AK G     PY  + DA RTI REEGPLALYKGAVPALML   G VQF  YE+LK            R +   QE              L MG  SK++++  TYP QVIK+RLQQR  + E T+AG        Y G   C + I R EG  GFFKGC+ +AVR AP++AITFV+YE V+  L
Sbjct:  112 QGLTPALVGSAASWGGYFFLYEGIKREWIERRREERERRRMRRGPSNDAAGTRPHDLSKDMHVDEEIDLRNGDGDDDDCGGANEHCSLGPMENFSAACAAGAAMVLVTNPVWLIKTRMQLQMKRTLERNKDCIRGAKGGADVKPPYRSMADAARTIVREEGPLALYKGAVPALMLVSHGGVQFVSYEFLKEHFGTYTRAARSRKDEAGQERNGTMEKLQDSLGYLAMGAVSKMIASTATYPLQVIKARLQQRNQSVELTEAGDLAVVRREYGGVADCVARIFRNEGPVGFFKGCIPNAVRVAPSAAITFVMYETVMDML 430
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18391.5712.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB8_ECTSI1.400e-10193.83Folate transporter n=1 Tax=Ectocarpus siliculosus ... [more]
A0A835YH58_9STRA1.800e-6753.25Mitochondrial carrier domain-containing protein n=... [more]
B5YLY4_THAPS3.980e-5847.54Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
W7T4J3_9STRA1.730e-5345.71Mitochondrial folate transporter carrier-like prot... [more]
FOLT1_ARATH3.570e-5344.17Folate transporter 1, chloroplastic n=35 Tax=Brass... [more]
B7FQZ1_PHATC3.570e-5345.92Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A8J2T2A8_9STRA8.780e-5345.96Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A836CHG8_9STRA6.010e-5257.49Folate transporter (Fragment) n=1 Tax=Tribonema mi... [more]
A0A6J0K2M2_RAPSA4.150e-5143.15folate transporter 1, chloroplastic isoform X3 n=6... [more]
A0A7S4JAZ4_9STRA2.340e-5040.13Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18391contigEcto-sp13_S_contig18391:351..3467 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score265.0
Seed ortholog evalue3e-68
Seed eggNOG ortholog2880.D7FQB8
Preferred nameSLC25A32
Model size1429
KEGG rclassRC00062,RC00189,RC00676,RC01052
KEGG koko:K00276,ko:K02935,ko:K15115
KEGG TC2.A.29.10.1,2.A.29.10.2,2.A.29.10.3,2.A.29.10.5
KEGG ReactionR02382,R02529,R02613,R03139,R04027,R04300,R06154,R06740
KEGG Pathwayko00260,ko00350,ko00360,ko00410,ko00950,ko00960,ko01100,ko01110,ko03010,map00260,map00350,map00360,map00410,map00950,map00960,map01100,map01110,map03010
KEGG ModuleM00178
Hectar predicted targeting categoryother localisation
GOsGO:0001505,GO:0003674,GO:0005215,GO:0005310,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006082,GO:0006520,GO:0006544,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006839,GO:0006855,GO:0006862,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0008517,GO:0009069,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0009987,GO:0015075,GO:0015215,GO:0015230,GO:0015238,GO:0015318,GO:0015605,GO:0015711,GO:0015748,GO:0015849,GO:0015883,GO:0015884,GO:0015893,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0017144,GO:0019752,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031966,GO:0031967,GO:0031975,GO:0032592,GO:0034220,GO:0034641,GO:0035350,GO:0035461,GO:0042133,GO:0042221,GO:0042493,GO:0042558,GO:0042886,GO:0042887,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0046483,GO:0046655,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051182,GO:0051184,GO:0051186,GO:0051234,GO:0055085,GO:0065007,GO:0065008,GO:0071702,GO:0071704,GO:0071705,GO:0072337,GO:0072349,GO:0090482,GO:0098573,GO:0098656,GO:0098838,GO:1901360,GO:1901564,GO:1901605,GO:1901679,GO:1903825,GO:1904947,GO:1905039,GO:1990542,GO:1990548
Exons5
EggNOG free text desc.Belongs to the mitochondrial carrier (TC 2.A.29) family
EggNOG OGsKOG0764@1,KOG0764@2759
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-01_006700.1
EC1.4.3.21
Cds size627
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko02000,ko03011
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18391.5712.1prot_Ecto-sp13_S_contig18391.5712.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18391 1083..3397 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462945.2497637-UTR-Ecto-sp13_S_contig18391:350..10821681462945.2497637-UTR-Ecto-sp13_S_contig18391:350..1082Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig18391 351..1082 -
1681462945.3116276-UTR-Ecto-sp13_S_contig18391:3397..34671681462945.3116276-UTR-Ecto-sp13_S_contig18391:3397..3467Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig18391 3398..3467 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462945.26679-CDS-Ecto-sp13_S_contig18391:1082..12981681462945.26679-CDS-Ecto-sp13_S_contig18391:1082..1298Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18391 1083..1298 -
1681462945.27554-CDS-Ecto-sp13_S_contig18391:1622..16941681462945.27554-CDS-Ecto-sp13_S_contig18391:1622..1694Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18391 1623..1694 -
1681462945.2848449-CDS-Ecto-sp13_S_contig18391:2164..23101681462945.2848449-CDS-Ecto-sp13_S_contig18391:2164..2310Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18391 2165..2310 -
1681462945.293132-CDS-Ecto-sp13_S_contig18391:2596..27831681462945.293132-CDS-Ecto-sp13_S_contig18391:2596..2783Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18391 2597..2783 -
1681462945.3030436-CDS-Ecto-sp13_S_contig18391:3391..33971681462945.3030436-CDS-Ecto-sp13_S_contig18391:3391..3397Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18391 3392..3397 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18391.5712.1

>prot_Ecto-sp13_S_contig18391.5712.1 ID=prot_Ecto-sp13_S_contig18391.5712.1|Name=mRNA_Ecto-sp13_S_contig18391.5712.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=209bp
MKNVFRARVPQDADLGTVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDK
KAKNGGVRPYSGLIDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVY
EWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQVIKSRLQQRGTAE
ETQAGSSRYRGTLHCASEIGRKEGVRGFFKGCVAHAVRAAPASAITFVVY
EEVLKALA*
back to top

mRNA from alignment at Ecto-sp13_S_contig18391:351..3467-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18391.5712.1 ID=mRNA_Ecto-sp13_S_contig18391.5712.1|Name=mRNA_Ecto-sp13_S_contig18391.5712.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3117bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18391:351..3467- (Ectocarpus species13 EcNAP12_S_4_19m)
CCAGGGCCTGGGTCCAGCATTACTCGGGAACGCCGTCGCCTGGGGAGGAT
TCTTCTACTGTTACGAGAAGATGAAGGTATGTTTGCATTTGTGTCGCGTG
GGTTTTGTTTTCGTTTCTTTGGGGGCTTTCCCTGGGATTGCTTGCAACTA
ATAGTTGGTCGAAACGCTTTTGAAGGCTCTGTCTCTGCTGTGCCTCCGTT
TTCTACGGGGTGAGCGCTCTACTGTTCTTATTGCCCGACGAAGCAAGCAC
GTGGGGATGCGAGAGGGGAGAGGTTGTCCTCGGTGTGACAACTGGCACGA
GAACAAACCGTTTTGGCGACAACCTGTCCGCCTGGCTTGACTAACGATTT
TTTTTTCGAGGGTGACATAGCCCTTGCTGTCTTGAATGCGGAGCTTTCTG
GCCGCCATCAACTCACCCTTCTACTATCCGCAGCCAGTTTCTCGAAACCT
CAATCCTCGCGTCAAGCTACGTTGTAAGCCCTTGCAGGAAGGATGGCGCC
ATTGCTGCGGGGTAATTCGTAGGTTTGATCGAAGTGTTTTTCCTTGTGCA
TGCGGGGTCACCTTGTGCATGCGGGTCGCGGTCGTTCTACACGTTCCCGA
TGCCATTCGTTCGTTGCTGTCCGCCCCCCCCGCCCCCCCCCCTTCGCGCG
CCGTTCTGACTTGTACCAACGTCCGTGCGTGCAGAACGTGTTCCGCGCTA
GAGTACCACAAGACGCTGATCTAGGGACGGTTCACCACCTCGGGGCGGGA
TACGTCGCAGGGGCGATGATGGTGTTGGCCACCAACCCCGTCTGGATGAT
CAAGACAAGGATGCAGCTGCAGGACAAGAAGGCTAAGAACGGGGGGGTTC
GTCCTTACTCGGGACTGATTGGTGTGTGCTTTCGTGCCTCCAGTGTACCA
TGTTGTGTTGGATTCTGTGTTAGGAAGGTGTTCCTGTGAATCTTGTGCGC
CATCTGCAACCACCGGCGGCACACCGAGAGGATTGGATGACAACAAACAA
TAATCGCACCTTTGCAGGTTTTGCTTCGCAAAGTTGCTCCCAAGCTCGAG
AGGAGGATGCCAGTGTTTCTGCTCGTCGTGTCATGATGTGATCGTGTGGT
TCCTGCAAAGCGCGGTCTGCTCACCACCTGATAACATCCTACCTTTACGA
AACGCAGATGCGGTACGAACAATAACGCGCGAAGAGGGGCCGCTGGCGCT
GTACAAGGGAGCGGTGCCAGCGCTGATGCTGTGCGGCCAAGGAGCGGTGC
AGTTCGCCGTGTACGAGTGGCTGAAAGCGAGAGTGCCGAAGCGAAACGAA
AATGTAACTTGATACGATAAATACGTTACCCATTTTAATGCGTTTCGCCG
CGTTTTACTTTGGCGTCGAAATGCTGTGGCTCGAAGAAATCGAGTGCACG
GTTCCTACTGTGTTTGAGGTAGCCCTGTTCCGACTTAATCGTTTTGCTGA
AACGGTGCATTGTGATGTACATGGCTCGTTGGTGGTACATTGGCAGCGGC
AAGCACGAGCGTTCCTCGCAACTGCTGTTGTCTACCCCCTGTAAACGTCT
CTGTCGTGTTTGTCCGCAGATTTTTTTTTTTTTGCAAACAGATCCCGTGC
CTGCTCGTGCTCGCAAGCCATGCATGTCTGTGTAGCGAGGGATGCGTGTG
AGTAATTTTCGGCACCTGAGAGAAATCCATCGAAGAAACTCGGAGAACTG
AAGTTTACTCTCTCTGGCTGTCCCGTATCCCCCCACTGTGCATGTTTCTC
GCTCGGCTTGCCTTTCTCCCCAGACGCCGCAGGAGTCGCTCTTAATGGGA
GGTGCGTCCAAGATTTTGTCTACCCTTGTGACCTACCCTACCCAGGTGAG
CACGTCGCTTCCAGATTCCGCATCACGAAGTGGATCTGCGGGCACACTTC
CTTGATTTTGCAGCCCCACCGCACCATCGCCTTCCTCCTAAATTATTGGC
ACCGCCGGCAGTTTCTTCACCAGTAAATTGCACACAAGATTCATCCTTTG
CCCGGCAATGTGTATCACTGTATGATGAGGAGACTTGTCAACGGCACCTT
TTGTGTGGAAAGCGCCTGCGCTTTCTGATCGTTTCGTTCCGACGACCCGA
CGTTGCTGTTTTTGTTTTGCCTCTTGTCTGTCCGTCCAACCTGCCCTTTG
ACCAAACCTTCCCGAAAAGGTCATCAAGTCGAGGCTGCAGCAGCGGGGCA
CTGCGGAGGAGACCCAGGCGGGGTCCTCCCGCTATCGGGGGACGTTGCAC
TGCGCGTCCGAAATCGGCAGAAAAGAGGGTGTCAGGGGTTTCTTCAAGGG
TTGCGTGGCGCACGCCGTGAGAGCAGCGCCTGCCTCCGCCATCACGTTCG
TCGTGTATGAGGAGGTGCTCAAGGCGCTGGCATAGGGTTAGGTGTGTTGC
AGCTTGATGGCTGCTGGTGCCCCCACTGTGTTCCTGGTGCCTCCTGTTTT
TTCTTTCAGTTTTTAAGAATCGAGAGCGCTACTGCGTACTATCTGCCGCT
GCTGCTGCCCGATGTTGTAGTGTGGCGGTAGGTGGCGTCTGCTTCGGGTT
GGAGAGTCCGTGTTGGCTTCCCGGGGCTACTCTTATATGAACATTTGGAG
TTGAGATGTGCTCTCGCTGTGGATTTTCGTTTCGTATGTTGCCGGTAAGC
ACGTCGTGCTTCGGTTTTTTGTTTTGTCCCGACAGTATGAAGTTTTTAGT
CTATGATGTGAGATCTTGTGGTTCATGCGTGGTTGTTGTCGACATCAATT
TGTGGATATGGTCAGTCGTTGGTTGTGTCACGAGAATTTGAGTATGTAGC
TGTCAGTGGACCACGTAAGTGTTGCTAGAGTTGGCAGGCTGGACGCCTGC
GATTTTCGTCTTGATATGTGGTGAAGTACCTTTGAAAATTCCTATGAGAT
GGCTCCTTCCGTTTTCATTACGCGCCCCCAGTCGAGGCGTGGTCGAGACC
AAGCTAGCGTGTGGTCATCGTCTACAAAAAAGCGAACAGATAGCTGAGTA
CGCGGAGGGGTATTTCCCCTCCCCCCCTTTTCGTTCCCCAAATGACACGC
ACGTGTATGGGCTCGACTTACCGTAAGAGGCGGAGAGACGGCACCCCCCC
TTGAGCGACTGTCAAAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18391:351..3467-

>mRNA_Ecto-sp13_S_contig18391.5712.1 ID=mRNA_Ecto-sp13_S_contig18391.5712.1|Name=mRNA_Ecto-sp13_S_contig18391.5712.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=627bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18391:351..3467- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGAACGTGTTCCGCGCTAGAGTACCACAAGACGCTGATCTAGGGAC
GGTTCACCACCTCGGGGCGGGATACGTCGCAGGGGCGATGATGGTGTTGG
CCACCAACCCCGTCTGGATGATCAAGACAAGGATGCAGCTGCAGGACAAG
AAGGCTAAGAACGGGGGGGTTCGTCCTTACTCGGGACTGATTGATGCGGT
ACGAACAATAACGCGCGAAGAGGGGCCGCTGGCGCTGTACAAGGGAGCGG
TGCCAGCGCTGATGCTGTGCGGCCAAGGAGCGGTGCAGTTCGCCGTGTAC
GAGTGGCTGAAAGCGAGAGTGCCGAAGCGAAACGAAAATACGCCGCAGGA
GTCGCTCTTAATGGGAGGTGCGTCCAAGATTTTGTCTACCCTTGTGACCT
ACCCTACCCAGGTCATCAAGTCGAGGCTGCAGCAGCGGGGCACTGCGGAG
GAGACCCAGGCGGGGTCCTCCCGCTATCGGGGGACGTTGCACTGCGCGTC
CGAAATCGGCAGAAAAGAGGGTGTCAGGGGTTTCTTCAAGGGTTGCGTGG
CGCACGCCGTGAGAGCAGCGCCTGCCTCCGCCATCACGTTCGTCGTGTAT
GAGGAGGTGCTCAAGGCGCTGGCATAG
back to top