mRNA_Ecto-sp13_S_contig18390.5711.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18390.5711.1 vs. uniprot
Match: D7FZZ0_ECTSI (2'-phosphotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ0_ECTSI) HSP 1 Score: 326 bits (836), Expect = 9.580e-108 Identity = 165/172 (95.93%), Postives = 170/172 (98.84%), Query Frame = 1
Query: 1 DDP--QLSKRLTYALRHGAEKLGLRLRPDGFVSLDELLSKPSFRGVSRQQVEQVVAADEKGRMTIATFPVSGGEAAGSATACADPGAATNQAVFIRANQGHSVKGVIDEEKLLTRVEDAADVPVCVHGTDRKSWSSIREDGLRCMNRTHIHFAAGLPGESGVISGMRKACKV 510
DDP QLSKRLTYALRHGAEKLGLRLRPDGFVSLDELLSKPSFRGVSR+QVEQVVA+DEKGRMTIATFPVSGGEAAGSA+ACADPGAATNQAVFIRANQGHSVKGVIDEEKLLTRVEDAADVPVCVHGTDRKSWS+IRE+GLRCMNRTHIHFAAGLPGESGVISGMRKACKV
Sbjct: 52 DDPRVQLSKRLTYALRHGAEKLGLRLRPDGFVSLDELLSKPSFRGVSREQVEQVVASDEKGRMTIATFPVSGGEAAGSASACADPGAATNQAVFIRANQGHSVKGVIDEEKLLTRVEDAADVPVCVHGTDRKSWSNIREEGLRCMNRTHIHFAAGLPGESGVISGMRKACKV 223
BLAST of mRNA_Ecto-sp13_S_contig18390.5711.1 vs. uniprot
Match: A0A6H5L3C1_9PHAE (2'-phosphotransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C1_9PHAE) HSP 1 Score: 313 bits (802), Expect = 4.090e-102 Identity = 158/167 (94.61%), Postives = 165/167 (98.80%), Query Frame = 1
Query: 10 QLSKRLTYALRHGAEKLGLRLRPDGFVSLDELLSKPSFRGVSRQQVEQVVAADEKGRMTIATFPVSGGEAAGSATACADPGAATNQAVFIRANQGHSVKGVIDEEKLLTRVEDAADVPVCVHGTDRKSWSSIREDGLRCMNRTHIHFAAGLPGESGVISGMRKACKV 510
QLSKRLTYALRHGAEKLGLRLRPDGFVSLDELLSKPSFRGVSR++VEQ+ AADEKGRMTIAT+PVSGGEAAGSATACADPGAATNQAVFIRANQGHS+KGVIDEEKLLTRVEDAADVPVCVHGT+RKSWSSIRE+GLRCMNRTHIHFAAGLPG SGVISGMRKACKV
Sbjct: 33 QLSKRLTYALRHGAEKLGLRLRPDGFVSLDELLSKPSFRGVSRERVEQI-AADEKGRMTIATYPVSGGEAAGSATACADPGAATNQAVFIRANQGHSMKGVIDEEKLLTRVEDAADVPVCVHGTNRKSWSSIREEGLRCMNRTHIHFAAGLPGASGVISGMRKACKV 198
BLAST of mRNA_Ecto-sp13_S_contig18390.5711.1 vs. uniprot
Match: A0A0G4EHX6_VITBC (2'-phosphotransferase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EHX6_VITBC) HSP 1 Score: 139 bits (351), Expect = 7.670e-38 Identity = 77/169 (45.56%), Postives = 98/169 (57.99%), Query Frame = 1
Query: 4 DPQLSKRLTYALRHGAEKLGLRLRPDGFVSLDELLSKPSFRGVSRQQVEQVVAADEKGRMTIATFPVSGGEAAGSATACADPGAATNQAVFIRANQGHSVKGVIDEEKLLTRVEDAADVPVCVHGTDRKSWSSIREDGLRCMNRTHIHFAAGLPGESGVISGMRKACKV 510
D QLS+ L+ LRH A GL +RPDGFV +D+L+ F S QQ+ VV ++K R ++ T D G +IRANQGHS + ++L R+E A D+PVCVHGT +W +IR GL+ M R HIHFA GLPGESGVISGMR +C V
Sbjct: 33 DVQLSRSLSMVLRHKAADFGLNVRPDGFVRVDDLMRLSRFTDYSVQQLHSVVENNDKQRFSLWTD---------------DEGTE-----WIRANQGHSAGVNVSADELYERIESAEDIPVCVHGTSEGAWEAIRRQGLKKMGRQHIHFAPGLPGESGVISGMRYSCSV 181
BLAST of mRNA_Ecto-sp13_S_contig18390.5711.1 vs. uniprot
Match: A0A1S2ZFK8_ERIEU (2'-phosphotransferase n=3 Tax=Erinaceus europaeus TaxID=9365 RepID=A0A1S2ZFK8_ERIEU) HSP 1 Score: 139 bits (349), Expect = 9.660e-38 Identity = 81/169 (47.93%), Postives = 98/169 (57.99%), Query Frame = 1
Query: 4 DPQLSKRLTYALRHGAEKLGLRLRPDGFVSLDELLSKPSFRGVSRQQVEQVVAADEKGRMTIATFPVSGGEAAGSATACADPGAATNQAVFIRANQGHSVKGVIDEEKLLTRVEDAADVPVCVHGTDRKSWSSIREDGLRCMNRTHIHFAAGLPGESGVISGMRKACKV 510
D QLSK L+YALRHGA KLGL + DGFV LD LL +P FRG S + V++VV D K R ++ S G IRANQGHS++ + + +L A P VHGT R+ W SIR GL C RTHIH AAGLPG+ GVISGMR +C+V
Sbjct: 28 DVQLSKALSYALRHGALKLGLPMGADGFVPLDALLQRPQFRGFSAEDVQRVVDTDAKQRFSLRPGDPSTGP-------------------LIRANQGHSLQ--VPDLELTPLETPQALPPQLVHGTFRRHWPSIRLSGLSCRGRTHIHLAAGLPGDPGVISGMRPSCEV 175
BLAST of mRNA_Ecto-sp13_S_contig18390.5711.1 vs. uniprot
Match: A0A3B5KDI8_TAKRU (2'-phosphotransferase n=3 Tax=Takifugu TaxID=31032 RepID=A0A3B5KDI8_TAKRU) HSP 1 Score: 138 bits (347), Expect = 1.110e-37 Identity = 76/168 (45.24%), Postives = 105/168 (62.50%), Query Frame = 1
Query: 4 DPQLSKRLTYALRHGAEKLGLRLRPDGFVSLDELLSKPSFRGVSRQQVEQVVAADEKGRMTIATFPVSGGEAAGSATACADPGAATNQAVFIRANQGHSVKGVIDEEKLLTRVEDAADVPV-CVHGTDRKSWSSIREDGLRCMNRTHIHFAAGLPGESGVISGMRKAC 504
D LSK ++Y LRHGA+++GL++ DGF+ +DELL+ P FR S + VE+VV ++K R + + P +G + +RA+QGHS+K V+D E L + + D P VHG+ ++WSSI++ GL CMNRTHIH A GLPGE GVISGMRK C
Sbjct: 28 DVHLSKSMSYVLRHGADQMGLQISSDGFLFVDELLAHPQFRSYSLEDVERVVNTNDKQRFKLRSHPENG-------------------CLQVRASQGHSIK-VMDLE-LKPVLAGSPDCPAEAVHGSYLRNWSSIKQQGLSCMNRTHIHLAPGLPGEDGVISGMRKDC 174
BLAST of mRNA_Ecto-sp13_S_contig18390.5711.1 vs. uniprot
Match: A0A7S1TNW9_9RHOD (2'-phosphotransferase n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TNW9_9RHOD) HSP 1 Score: 136 bits (343), Expect = 2.360e-37 Identity = 77/167 (46.11%), Postives = 99/167 (59.28%), Query Frame = 1
Query: 10 QLSKRLTYALRHGAEKLGLRLRPDGFVSLDELLSKPSFRGVSRQQVEQVVAADEKGRMTIATFPVSGGEAAGSATACADPGAATNQAVFIRANQGHSVKGVIDEEKLLTRVEDAADVPVCVHGTDRKSWSSIREDGLRCMNRTHIHFAAGLPGESGVISGMRKACKV 510
+LS+ L+ LRH A + G+R+ DGFV+++EL P F +S ++V +VV DEK R + T +G A+ IRANQGHS+ G ID++KLL RV D D C+HGT RK+W IR DGLR M R HIHFA G GE V+SGMRK C V
Sbjct: 9 KLSRALSRVLRHTATRDGVRVGADGFVAVEELRRLPRFATLSDERVREVVGRDEKKRYALRTEARTG-------------------ALEIRANQGHSLVGAIDDDKLLERVVDWPDGQRCIHGTTRKAWGLIRTDGLRPMGRNHIHFAPGYFGEPHVVSGMRKNCAV 156
BLAST of mRNA_Ecto-sp13_S_contig18390.5711.1 vs. uniprot
Match: A0A3B4BR18_PYGNA (2'-phosphotransferase n=3 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4BR18_PYGNA) HSP 1 Score: 137 bits (344), Expect = 2.810e-37 Identity = 77/168 (45.83%), Postives = 103/168 (61.31%), Query Frame = 1
Query: 4 DPQLSKRLTYALRHGAEKLGLRLRPDGFVSLDELLSKPSFRGVSRQQVEQVVAADEKGRMTIATFPVSGGEAAGSATACADPGAATNQAVFIRANQGHSVKGVIDEEKLLTRVEDAADVPV-CVHGTDRKSWSSIREDGLRCMNRTHIHFAAGLPGESGVISGMRKAC 504
D +LSK L+YALRHGA K+GL + DGF+ +DELL+ P F S + +E+VVA ++K R + P +G + IRANQGH+V+ +++ +L V DA+D P VHG+ + W+SIR GL MNRTHIH A GLPGES VISGMR+ C
Sbjct: 24 DVRLSKSLSYALRHGASKMGLHMSSDGFIFVDELLAHPQFSSFSLEDLERVVAMNDKQRFKLQNHPENG-------------------RLQIRANQGHTVQ--VEDLELRAVVPDASDCPQEAVHGSYMRHWASIRSKGLSRMNRTHIHLAPGLPGESQVISGMRQNC 170
BLAST of mRNA_Ecto-sp13_S_contig18390.5711.1 vs. uniprot
Match: A0A671N1J7_9TELE (2'-phosphotransferase n=12 Tax=Cyprinoidei TaxID=30727 RepID=A0A671N1J7_9TELE) HSP 1 Score: 136 bits (343), Expect = 3.970e-37 Identity = 77/167 (46.11%), Postives = 98/167 (58.68%), Query Frame = 1
Query: 4 DPQLSKRLTYALRHGAEKLGLRLRPDGFVSLDELLSKPSFRGVSRQQVEQVVAADEKGRMTIATFPVSGGEAAGSATACADPGAATNQAVFIRANQGHSVKGVIDEEKLLTRVEDAADVPVCVHGTDRKSWSSIREDGLRCMNRTHIHFAAGLPGESGVISGMRKAC 504
D +LSK L+YALRHGA K+GL++ DGFV ++ELL+ FR S + VE+V+A ++K R + P G + IRANQGHSVK V D E ++D VHG+ K W SIR G+ MNRTHIH A GLPGE GVISGMR++C
Sbjct: 24 DVRLSKSLSYALRHGANKMGLQMNSDGFVFVEELLAHQQFRSFSLEDVERVMATNDKQRFKLCNHPEDG-------------------RLQIRANQGHSVK-VTDLELRAVALDDPDYPREAVHGSYMKHWPSIRSQGISRMNRTHIHLAPGLPGEGGVISGMRQSC 170
BLAST of mRNA_Ecto-sp13_S_contig18390.5711.1 vs. uniprot
Match: A0A667ZT21_9TELE (2'-phosphotransferase n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667ZT21_9TELE) HSP 1 Score: 136 bits (342), Expect = 5.920e-37 Identity = 79/168 (47.02%), Postives = 105/168 (62.50%), Query Frame = 1
Query: 4 DPQLSKRLTYALRHGAEKLGLRLRPDGFVSLDELLSKPSFRGVSRQQVEQVVAADEKGRMTIATFPVSGGEAAGSATACADPGAATNQAVFIRANQGHSVKGVIDEEKLLTRVEDAADVPV-CVHGTDRKSWSSIREDGLRCMNRTHIHFAAGLPGESGVISGMRKAC 504
D +LSK +++ALRHGA ++GL++ DGF+ +DELL+ P FR S + VE+VVA ++K R + P G + IRANQGHSV+ V+D E L + +AD P VHG+ ++WSSIR+ GL M RTHIH AAGLPGE GVISGMR+ C
Sbjct: 26 DVRLSKSMSFALRHGANQMGLQMGADGFLFVDELLAHPQFRSYSLEDVERVVATNDKQRFKLRPHPEDG-------------------QLQIRANQGHSVQ-VMDLE-LKPVLAGSADCPAEAVHGSYLRNWSSIRQQGLSRMTRTHIHLAAGLPGEDGVISGMRRDC 172
BLAST of mRNA_Ecto-sp13_S_contig18390.5711.1 vs. uniprot
Match: UPI001C0A03F7 (tRNA 2'-phosphotransferase 1 isoform X1 n=4 Tax=Alosa TaxID=34772 RepID=UPI001C0A03F7) HSP 1 Score: 135 bits (340), Expect = 1.150e-36 Identity = 81/170 (47.65%), Postives = 100/170 (58.82%), Query Frame = 1
Query: 4 DPQLSKRLTYALRHGAEKLGLRLRPDGFVSLDELLSKPSFRGVSRQQVEQVVAADEKGRMTIATFPVSGGEAAGSATACADPGAATNQAVFIRANQGHSVKGVIDEEKLLTRVEDAADVPV-CVHGTDRKSWSSIREDGLRCMNRTHIHFAAGLPGESGVISGMRKACKV 510
D +LSK +TYALRHGA K+GL + DGFV +D+L+S P FR S + VE+VVA ++K R + P +G + IRANQGHSV+ V D E E A D P +HG+ K W SIR GL M RTHIH A GLPGE GVISGMRK C++
Sbjct: 25 DVRLSKSMTYALRHGASKMGLHMNSDGFVFVDDLISHPQFRSFSLEDVERVVANNDKQRFKLRRHPENG-------------------RLQIRANQGHSVQ-VADLELRAVHPE-AQDFPQEGIHGSYLKHWPSIRNQGLSRMGRTHIHLAPGLPGEQGVISGMRKNCEL 173 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18390.5711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18390.5711.1 >prot_Ecto-sp13_S_contig18390.5711.1 ID=prot_Ecto-sp13_S_contig18390.5711.1|Name=mRNA_Ecto-sp13_S_contig18390.5711.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=170bp DDPQLSKRLTYALRHGAEKLGLRLRPDGFVSLDELLSKPSFRGVSRQQVEback to top mRNA from alignment at Ecto-sp13_S_contig18390:1091..3492+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18390.5711.1 ID=mRNA_Ecto-sp13_S_contig18390.5711.1|Name=mRNA_Ecto-sp13_S_contig18390.5711.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2402bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18390:1091..3492+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18390:1091..3492+ >mRNA_Ecto-sp13_S_contig18390.5711.1 ID=mRNA_Ecto-sp13_S_contig18390.5711.1|Name=mRNA_Ecto-sp13_S_contig18390.5711.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=510bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18390:1091..3492+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |