prot_Ecto-sp13_S_contig1839.5710.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1839.5710.1
Unique Nameprot_Ecto-sp13_S_contig1839.5710.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length318
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1839.5710.1 vs. uniprot
Match: D8LSN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN9_ECTSI)

HSP 1 Score: 479 bits (1234), Expect = 1.330e-168
Identity = 258/317 (81.39%), Postives = 260/317 (82.02%), Query Frame = 0 
Query:    1 MRFSPCWHAATISLLQTCSVGEGRHVHHARDAPPLATPTGASPPLPVMAYAFSPSTRRALHPATTTTSSRRSSASKPRLGHRHLSATQGTTRMSEAARPGADSGVALWLDMRTAVLPAAQTLKTLYGELRQREEALGRSPEDPDWTLSRVPNPVGALLYAAEPEERAAEEMAALGEGAAALPCFRLGGTDGAAVVVDVASGHVVGVRVDPVSDNTAWEAAGSSAAMGIVAAAQQQLDGGGLVFLPGVPPSVWESGDMDTVLRIASSACAGAGKTLVXXXXXXXXXXXXXXXXXXXXXXMALLIEPMPELWEAGLLYL 317
            MRFSPCWHAATISLLQTCS GEGRHVHHARD PPLATPTGASPPLP+MAYAFSPSTRRALHPATTTTSSRRSSASKPRLGHRH SATQ TTRMSEAARPGADSGVALWLDMRTAVLPAAQTLKTLYGELRQREEALGRSPED DWTLSRVPNPVGALLYAAEPEERAAEEM ALGE AAALPCFRLGGTDG AVVVDV+SGHVVGVRVDPV DN A                       GLVFLPGV PSVWESGDM TVLRIASSACAGAGKTLV                      MALLIEPMPELWEAGLLYL
Sbjct:    1 MRFSPCWHAATISLLQTCSAGEGRHVHHARDPPPLATPTGASPPLPLMAYAFSPSTRRALHPATTTTSSRRSSASKPRLGHRHRSATQRTTRMSEAARPGADSGVALWLDMRTAVLPAAQTLKTLYGELRQREEALGRSPEDTDWTLSRVPNPVGALLYAAEPEERAAEEMVALGETAAALPCFRLGGTDGTAVVVDVSSGHVVGVRVDPVGDNAAGXXXXXXXXXXXXXXXXXXXXXXGLVFLPGVRPSVWESGDMGTVLRIASSACAGAGKTLVVTTTVLGVGGTGAAEDGTTPPPMALLIEPMPELWEAGLLYL 317
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1839.5710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSN9_ECTSI1.330e-16881.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1839contigEcto-sp13_S_contig1839:10375..11385 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1839.5710.1mRNA_Ecto-sp13_S_contig1839.5710.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1839 10375..11385 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1839.5710.1 ID=prot_Ecto-sp13_S_contig1839.5710.1|Name=mRNA_Ecto-sp13_S_contig1839.5710.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=318bp
MRFSPCWHAATISLLQTCSVGEGRHVHHARDAPPLATPTGASPPLPVMAY
AFSPSTRRALHPATTTTSSRRSSASKPRLGHRHLSATQGTTRMSEAARPG
ADSGVALWLDMRTAVLPAAQTLKTLYGELRQREEALGRSPEDPDWTLSRV
PNPVGALLYAAEPEERAAEEMAALGEGAAALPCFRLGGTDGAAVVVDVAS
GHVVGVRVDPVSDNTAWEAAGSSAAMGIVAAAQQQLDGGGLVFLPGVPPS
VWESGDMDTVLRIASSACAGAGKTLVVTTTVLGAGGTGAAEGGTTPPPMA
LLIEPMPELWEAGLLYL*
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