prot_Ecto-sp13_S_contig18388.5709.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18388.5709.1
Unique Nameprot_Ecto-sp13_S_contig18388.5709.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length157
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18388.5709.1 vs. uniprot
Match: D7G4X8_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X8_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 2.360e-38
Identity = 72/85 (84.71%), Postives = 78/85 (91.76%), Query Frame = 0 
Query:    1 MHRLYRGGGESGEYDGVVKGDMWSDGIREAEEEREGESAMSDSRVGGSSCTLYGCTREPTHGVAGKKAEFCSRHSLAASVNVSKE 85
            MHRLYRGGGES E+ GVVK +MWSD IREAE+EREGE AMSDS VGGSSCTLYGCTR+PTHGVAGKKAEFC+RHSLA SVNVS+E
Sbjct:    1 MHRLYRGGGESSEFGGVVKEEMWSDDIREAEDEREGELAMSDSHVGGSSCTLYGCTRKPTHGVAGKKAEFCARHSLATSVNVSQE 85
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BLAST of mRNA_Ecto-sp13_S_contig18388.5709.1 vs. uniprot
Match: A0A6H5JDP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDP1_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 4.450e-24
Identity = 54/64 (84.38%), Postives = 57/64 (89.06%), Query Frame = 0 
Query:   22 MWSDGIREAEEEREGESAMSDSRVGGSSCTLYGCTREPTHGVAGKKAEFCSRHSLAASVNVSKE 85
            MWS   REAE+EREGESAMSDS+VGGSSCT Y CTREPT GVAG+KA FCSRHSLAASVNVSKE
Sbjct:    1 MWSGDTREAEDEREGESAMSDSQVGGSSCTQYRCTREPTRGVAGQKAGFCSRHSLAASVNVSKE 64
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18388.5709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4X8_ECTSI2.360e-3884.71EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JDP1_9PHAE4.450e-2484.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18388contigEcto-sp13_S_contig18388:831..1301 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18388.5709.1mRNA_Ecto-sp13_S_contig18388.5709.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18388 12..3294 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18388.5709.1 ID=prot_Ecto-sp13_S_contig18388.5709.1|Name=mRNA_Ecto-sp13_S_contig18388.5709.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=157bp
MHRLYRGGGESGEYDGVVKGDMWSDGIREAEEEREGESAMSDSRVGGSSC
TLYGCTREPTHGVAGKKAEFCSRHSLAASVNVSKECNVDGCSTRAHYGVA
GSKKWEFSQNTRWKGWSTSPTGNTQAMVASRRHILVSQGARRRSSAPSMH
SRAWSI*
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