mRNA_Ecto-sp13_S_contig18386.5708.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18386.5708.1
Unique NamemRNA_Ecto-sp13_S_contig18386.5708.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig18386.5708.1 vs. uniprot
Match: A0A6H5JK89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK89_9PHAE)

HSP 1 Score: 863 bits (2231), Expect = 6.000e-298
Identity = 429/454 (94.49%), Postives = 439/454 (96.70%), Query Frame = 1
Query:    1 ERNRVAYLASKVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVEDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASRSSKKLRPPRTPGGVACDRENGAAYIRGALGITSPSGEEGDGAGRSHEQRRWRPRYLIVADDVYEPEVLEELHGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLSYIGRWGVVHGTTDAKAWGVALNSVFLEGGEGGQEWTRRRWHTAVLFAGMADLARLNGKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGNTKAAKASKAATPDLGAVMKVLGVLERCSVLFLEQGGRYCMHSSHADFVRELITCFPLSRKRALGRWREHASTPAALFAWPVED 1362
            ERNRVA+LASKVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAV DLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYET+LKSGEAS SSKKLRPPRTPGGVACDRENGAAYIRGALGIT P  EEGDG G SHEQRRWRPRYLIVADDVYEPEVLEEL GIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDL+YIGRWGVV GTTDAKAW  ALNSVFLEGG+GGQEWTRRRWHTAVLFAGMADLARLN KAKDLYLSLAVLPKGLSFTPTDAAALLFGGGG+TKA +A+KAATPDLGAVM+VLGVLERCSVLFLE+GGRYCMH SHADFVRELI+CFPLSRKRALGRWREH STPAALFAWPVED
Sbjct:  228 ERNRVAFLASKVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVGDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETILKSGEASWSSKKLRPPRTPGGVACDRENGAAYIRGALGITFPGREEGDGGGGSHEQRRWRPRYLIVADDVYEPEVLEELQGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLAYIGRWGVVRGTTDAKAWEAALNSVFLEGGDGGQEWTRRRWHTAVLFAGMADLARLNDKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGDTKATQAAKAATPDLGAVMEVLGVLERCSVLFLEEGGRYCMHGSHADFVRELISCFPLSRKRALGRWREHTSTPAALFAWPVED 681          
BLAST of mRNA_Ecto-sp13_S_contig18386.5708.1 vs. uniprot
Match: D7G2X0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X0_ECTSI)

HSP 1 Score: 726 bits (1874), Expect = 1.160e-251
Identity = 369/401 (92.02%), Postives = 376/401 (93.77%), Query Frame = 1
Query:  172 MVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASRSSKKLRPPRTPGGVACDRENGAAYIRGALGITSPSGEEGDGAGRSHEQRRWRPRYLIVADDVYEPEVLEELHGIGAWVLYTTTRSASFIRRNGERSEGDGDG----GDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLSYIGRWGVVHGTTDAKAWGVALNSVFLEGGEGGQEWTRRRWHTAVLFAGMADLARLNGKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGNTKAAKASKAATPDLGAVMKVLGVLERCSVLFLEQGGRYCMHSSHADFVRELITCFPLSRKRALGRWREHASTPAALFAWPVED 1362
            MVGLAGPTGCGKSTVTSLVVAREDVRA+FRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEAS SSKKLRPPRTPGGVACDRENGAAYIRGALGIT P GEEGDG G SHEQRRWRPRYLIVADDVYEPEVLEEL GIGAWVLYTTTRSASFIRRNGERSEGD       GDHADVLRLDNISDAEGETVLRRASGLD EAELPQPALDL KSYGSVVMDL+YIGRWGVVHGTTD KAW VALNSVFLEGGEGGQEWTRRRWHTAVLFAGMADLARLN KAKDLYLSLAVLPKGLSFTP DAAALLFGG  +TKAAKA   ATPDLGAVM+VLGVLE+CSVLFLE+GGRYCMH SHADFVRELI+CFPLSRKRALGRWREHASTPAALFAWPVED
Sbjct:    1 MVGLAGPTGCGKSTVTSLVVAREDVRAHFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASWSSKKLRPPRTPGGVACDRENGAAYIRGALGITRPGGEEGDGGGESHEQRRWRPRYLIVADDVYEPEVLEELQGIGAWVLYTTTRSASFIRRNGERSEGDXXXXXXXGDHADVLRLDNISDAEGETVLRRASGLDPEAELPQPALDLFKSYGSVVMDLAYIGRWGVVHGTTDVKAWEVALNSVFLEGGEGGQEWTRRRWHTAVLFAGMADLARLNDKAKDLYLSLAVLPKGLSFTPADAAALLFGG--DTKAAKA---ATPDLGAVMEVLGVLEQCSVLFLEEGGRYCMHGSHADFVRELISCFPLSRKRALGRWREHASTPAALFAWPVED 396          
BLAST of mRNA_Ecto-sp13_S_contig18386.5708.1 vs. uniprot
Match: A0A6H5KZP3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZP3_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 3.150e-86
Identity = 188/449 (41.87%), Postives = 245/449 (54.57%), Query Frame = 1
Query:   25 ASKVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVEDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASRSSKKLRPPRTPGGVACDRENGAAYIRGALGITSPSGEEGDGAGRSHEQRRWRPRYLIVADDVYEPEVLEELHGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLSYIGRWGVVHGTTDAKAWGVALNSVFLEGGEGGQEWTRRRWHTAVLFAGMADLARLNGKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGNTKAAKASKAATPDLGAVMKVLGVLERCSVLFLEQGGRYCMHSSHADFVRELITCFPLSRKRALGRWREHASTPAALF----AWPVE 1359
            A +V VPS APRI  W++ R E V + C  LG+ SG +       E PR+VG++GP G GKST+ S+V+AR+DVR YF  G++WLPV G+GA+H LP+LML LA MVYETVL+        K  RPPR  G V  D E+GA YI   +  ++                    R+L+VADD+ EPEVLEEL   G WVLYT+ R                     A +LRLD ++  EG  VLRRA+GL  +A LP  A +L++      M L++ GRWGVV G +D +AW  AL  +  E  + G       W  A+L  G  +L   +   K+LYLSLA+LPKGL+F    AA LL+G           + +  +L A  K L  LER S+L LE  G+Y +H  HADFVRE        R+ AL RWR +AS   AL     AW V+
Sbjct:  119 AGEVAVPSGAPRIHEWHVERKEAVAEACDSLGIGSGKSEF----FEMPRVVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPV-GEGAKHCLPELMLHLARMVYETVLR--------KACRPPRLAG-VGVDPEDGAGYIHEVVNESNH-------------------RFLVVADDIREPEVLEELKWAGVWVLYTSRRDDLLTG---------------APLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQRCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHI-AEAQKRGGNGRLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYG----------DECSADELEAAGKALETLERLSILTLEVSGKYRVHEVHADFVRECEVANNEEREMALARWRGYASDLRALSTYSSAWLVK 508          
BLAST of mRNA_Ecto-sp13_S_contig18386.5708.1 vs. uniprot
Match: D7G5Y4_ECTSI (NB-ARC and TPR containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y4_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 7.190e-78
Identity = 176/441 (39.91%), Postives = 239/441 (54.20%), Query Frame = 1
Query:   31 KVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVEDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASRSSKKLRPPRTPGGVACDRENGAAYIRGALGITSPSGEEGDGAGRSHEQRRWRPRYLIVADDVYEPEVLEELHGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLSYIGRWGVVHGTTDAKAWGVALNSVF---LEGGEGGQEWTRRRWHTAVLFAGMADLARLNGKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGNTKAAKASKAATPDLGAVMKVLGVLERCSVLFLEQG-GRYCMHSSHADFVRELITCFPLSRKRALGRWREHASTPAAL 1341
            +V +PS AP I+ WY+ R      +C  LG+ + + +      E+PRMVGLAGP G GKSTV S+VV + DV+A+FR  ++WL V GKGA+ RLP LM  LAN V ETVL+        K  R PR    V  + E+GAAYIR   G       +GD             R+L+VADDV++ EVL EL   GAWV+YTT ++  F                    +RL+ + + E E +LRRA+ L  +A LP  A +L+K     V+DL+ +GRWG +   +   AW  AL+S+      GG+GGQ      W  AVL AG+  LA  N +  +LY +LA+LP GL+F P  A  LL+G   +  A KA++A          VLG LER S+L LE+  G Y +H +H DFV +       +R  AL RWR + S+  AL
Sbjct:    6 RVNIPSGAPSIRDWYVERVGVATQICHHLGIGTSNGIPSF-PGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSV-GKGAKDRLPALMFELANRVRETVLQ--------KMARRPREAT-VGINSEDGAAYIREEAG-------KGD------------TRFLVVADDVWDAEVLGELRRAGAWVIYTTRKTELFPG---------------TPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCESAWRAALDSIIETQRAGGDGGQ---LLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEA----------VLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRAL 388          
BLAST of mRNA_Ecto-sp13_S_contig18386.5708.1 vs. uniprot
Match: A0A6H5JI56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI56_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 1.740e-77
Identity = 176/453 (38.85%), Postives = 239/453 (52.76%), Query Frame = 1
Query:   22 LASKVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVEDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDG-IVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASRSSKKLRPPRTPGGVACDRENGAAYIRGALGITSPSGEEGDGAGRSHEQRRWRPRYLIVADDVYEPEVLEELHGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLSYIGRWGVVHGTTDAKAWGVALNSV-----FLEGGEGGQEWTRRRWHTAVLFAGMADLARLNGKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGNTKAAKASKAATPDLGAVMKVLGVLERCSVLFLEQGGRYCMHSSHADFVRELITCFPLSRKRALGRWREHASTPAALFAWPVED 1362
            L SK K P+ AP +Q W+I R   V  +C RLGV         G   EP +VG+AGP+G GKST+ S+++AR DVR +F +  IVWLPV G+GA  RL D+M  LA MV+E V+ S          RPP+ P  +  + E+GAAY+R  L  T+  GE   G              L+VADD++E EVL EL   GA +LYTT      +  +G            +DVLR+D +++ E E +LRRA+ L    +LP  A D+I+  G V MD++Y+GRW +V G  D  AW V L  V     F++G           W +AVL  G+  L   +   K+LYLSL VLP+ LSF+  D  AL+  G            +  +L A    +  LE+ SVL   +GGRY +H SHAD   + I+  P +   AL RWR   ST  A+ AW  E+
Sbjct:  298 LYSKAKGPAEAPLLQDWFIQREPVVAAICDRLGVNDRGGSRASG---EPPVVGVAGPSGAGKSTIASMIIARNDVRGHFSEKRIVWLPV-GQGARDRLLDVMYRLAVMVHELVVNSSSFPDDGP-FRPPQPPD-IGVEPEDGAAYVREIL--TADEGERSSGG---------FGELLVVADDIWEAEVLAELRSTGASILYTTRSEEDLLAASGG-----------SDVLRVDEVTEGEAEEILRRAADLLDHTKLPDAAHDIIRRGGPVAMDVAYVGRWDIVRGNNDQAAWAVVLAHVIDAQNFMKGA------ALLPWRSAVLRVGLTRLGLADQGTKELYLSLGVLPRNLSFSVGDVTALVSDG------------SAEELQAATLAITTLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDPATLGSALARWRNRVSTAEAVLAWRTEE 704          
BLAST of mRNA_Ecto-sp13_S_contig18386.5708.1 vs. uniprot
Match: A0A6H5KXU5_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU5_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 5.230e-77
Identity = 174/441 (39.46%), Postives = 241/441 (54.65%), Query Frame = 1
Query:   31 KVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVEDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASRSSKKLRPPRTPGGVACDRENGAAYIRGALGITSPSGEEGDGAGRSHEQRRWRPRYLIVADDVYEPEVLEELHGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLSYIGRWGVVHGTTDAKAWGVALNSVF---LEGGEGGQEWTRRRWHTAVLFAGMADLARLNGKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGNTKAAKASKAATPDLGAVMKVLGVLERCSVLFLEQG-GRYCMHSSHADFVRELITCFPLSRKRALGRWREHASTPAAL 1341
            +V +PS AP I+ WY+ R +    +C  LG+ + + +      E+PRMVGLAGP G GKSTV S+VV + DV+A+FR  ++WL V GKGA+ RLP LM  LA  V ETVL+        K  R PR    V  + E+GAAYIR   G       +GD             R+L+VADDV++ EVL EL   GAWV+YTT ++  F                    +RL+ + + E E +LRRA+ L  +  LP  A +L++     V+DL+ +GRWG + G +  +AW  AL+S+      GG+GGQ      W  AVL AG+  LA  N +  +LY +LA+LP GL+F P  A  LL+G   +  A KA++A          VLG LER S+L LE+  G Y +H +H DFV +       +R  AL RWR++ S+  AL
Sbjct:  172 RVNIPSGAPSIRDWYVERVKVEAQICHHLGIGTSNGIPSF-PEEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSV-GKGAKDRLPTLMFELAKTVRETVLQ--------KMARRPREAT-VGINSEDGAAYIREEAG-------KGD------------TRFLVVADDVWDAEVLAELRRAGAWVIYTTRKAELFPE---------------TPAIRLEEVLEEEAEMMLRRAADLGEKTRLPPAAYELMRRCDFSVLDLALVGRWGKIRGRSCERAWRAALDSIIETQRAGGDGGQ---LLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEA----------VLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRQYISSVRAL 554          
BLAST of mRNA_Ecto-sp13_S_contig18386.5708.1 vs. uniprot
Match: D8LT49_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT49_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 3.040e-75
Identity = 174/448 (38.84%), Postives = 234/448 (52.23%), Query Frame = 1
Query:   37 KVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVEDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYF-RDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASRSSKKLRPPRTPGGVACDRENGAAYIRGALGITSPSGEEGDGAGRSHEQRRWRPRYLIVADDVYEPEVLEELHGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLSYIGRWGVVHGTTDAKAWGVALNSV-----FLEGGEGGQEWTRRRWHTAVLFAGMADLARLNGKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGNTKAAKASKAATPDLGAVMKVLGVLERCSVLFLEQGGRYCMHSSHADFVRELITCFPLSRKRALGRWREHASTPAALFAWPVED 1362
            K P+ AP +Q W+I R   V  +C RLGV         G   EP +VG+AGP+G GKST+ S++VAR DVR +F + G+VWL V G+GA  RL D+M  LA MV+E  L    +S      RPPRTP  +  + E+GAAY+R  L   +  GE   G              L+VADDV+E EVL EL   GA +LYTT      +  +G  S           VLR+D +++ E E +LRRA+ L   ++LP  A D+I+  GSV MD++Y+GRW +V G  D  AW   L  V     F++G           W +AVL  G+  L   +   K+LYLSL VLP+ LSF+  D  AL+  G            +  +L A    +  LE+ SVL   +GGRY +H SHAD   + I+  P     AL RWR   ST  A+  W  E+
Sbjct:  259 KSPAEAPLLQDWFIQREPVVAAICDRLGVNDRGRSRASG---EPPVVGVAGPSGAGKSTIASMIVARHDVRGHFSQKGVVWLSV-GQGARDRLLDVMYRLAVMVHE--LADSSSSPDDGPFRPPRTPD-IGVEPEDGAAYVREIL--AADEGERSSGG---------FGELLVVADDVWEAEVLAELRNTGASILYTTRSEEDLLAASGGSS-----------VLRVDEVTEGEAEELLRRAAALLDYSKLPDAAHDIIRRGGSVAMDVAYVGRWDIVRGKNDQAAWAAVLAHVIDAQNFMKGA------ALLPWRSAVLRVGVTRLGLADQGTKELYLSLGVLPRNLSFSVDDVTALVSDG------------SAEELQAATLAMATLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDPAILGPALARWRNRVSTAEAVLTWRTEE 659          
BLAST of mRNA_Ecto-sp13_S_contig18386.5708.1 vs. uniprot
Match: A0A6H5JL31_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL31_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 2.590e-65
Identity = 157/447 (35.12%), Postives = 228/447 (51.01%), Query Frame = 1
Query:    1 ERNRVAYLASKVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVEDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASRSSKKLRPPRTPGGVACDRENGAAYIRGALGITSPSGEEGDGAGRSHEQRRWRPRYLIVADDVYEPEVLEELHGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLSYIGRWGVVHGTTDAKAWGVALNSVFLEGGEGGQEWTRRRWHTAVLFAGMADLARLNGKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGNTKAAKASKAATPDLGAVMKVLGVLERCSVLFLEQGGRYCMHSSHADFVRELITCFPLSRKRALGRWREHASTPAAL 1341
            E+ RVA LAS V++P+ APRI+  ++ R E +  VC+ LG+   +         E ++VGLAG  G GKSTV S+V+ REDVRA+F  G++WL V  +    RL +L+  LA MVYETV +        K+ RP R  G +  D E+ AAYI+  L +  P                   R+L+VADDV++ EVL+EL     W +  T+R+   + R              A V+ LD +   E E VLR A+ L  +A LP+ A DL++      +DL ++GRW      T   AW  AL+ + ++    G+      W  AVL  G+ +LA  N   ++LYL+LAV+P+G  F P  AA LL+G G + +  +       D      +   LER S++    GG Y +H  H DF+R        +R   L RWR + S+ +AL
Sbjct:   13 EQRRVADLASTVRIPTTAPRIRDRFVERGEVISQVCSLLGIEDHTTAYPA----EMKVVGLAGAGGSGKSTVASMVIRREDVRAFFPGGVLWLSVGQRAGRDRLLELLTSLAGMVYETVFQ--------KRCRPLRK-GVIGTDDEDPAAYIQ-CLQVERPR------------------RFLVVADDVWQTEVLDELRRASVWGVLYTSRNTDLLPR--------------APVVLLDQLDREEAEMVLRNAAELAKDACLPEAAYDLMRRCEYAALDLDFVGRWSRTRRRTSELAWRGALDCI-VDAQTRGEGRLPLSWRAAVLHTGLEELAGENSANRELYLALAVIPRGQPFPPDVAAVLLYGDGRSGEEKE-------DREEAKNIFETLERWSIITRVGGGWYRVHDEHTDFIRASFAANQHARNTTLIRWRRYMSSVSAL 405          
BLAST of mRNA_Ecto-sp13_S_contig18386.5708.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 3.670e-52
Identity = 158/452 (34.96%), Postives = 214/452 (47.35%), Query Frame = 1
Query:   25 ASKVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVEDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASRSSKKLRPPRTPGGVACDRENGAAYIRGALGITSPSGEEGDGAGRSHEQRRWRPRYLIVADDVYEPEVLEELHGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLSYIGRWGVVHGTTDAKAWGVALNSVFLEGGE-------GGQEWTRRRWHTAVLFAGMADLARLNG--KAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGNTKAAKASKAATPDLGAVMKVLGVLERCSVL--------FLEQGGRYCMHSSHADFVRELITCFPLSRKRALGRWREHAST 1329
            A   K+P   P  ++W++ R   +E V   L    G           P +VGL G +G GK+T  S +V   +VR  F DG+VWL V   GA+ RLP LML LA+M+ E V   G         R P T        ++GAAYI+  +      G  G G            + L+VAD+V+E EV+ +L   G WVL +T      +   GE             V+ +D +S+ E E+VLR+AS L  E  LP  A+DLI+  G V MDL+++GRW  V G +D  AW  A   V  E G+       G    TR     AVL AG  DLA  +   + + LYLSLAVLP G  FT  DAA LL+            K +  D  +   V+ +LER SVL           +GG Y +H +H+DF RE +      R+ AL RW  + S+
Sbjct:  198 AKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGG-----------PHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVN-HGAKDRLPSLMLQLAHMMCEEV--GG---------RRPATS-------DDGAAYIKEKM----QRGHGGKGL-----------KCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGE-------------VVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYD----------RKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISS 581          
BLAST of mRNA_Ecto-sp13_S_contig18386.5708.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 1.720e-49
Identity = 150/438 (34.25%), Postives = 214/438 (48.86%), Query Frame = 1
Query:   25 ASKVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVEDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASRSSKKLRPPRTPGGVACDRENGAAYIRGALGITSPSGEEGDGAGRSHEQRRWRPRYLIVADDVYEPEVLEELHGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLSYIGRWGVVHGTTDAKAWGVALNSVFLEGGEGGQ-------EWTRRRWHTAVLFAGMADLA--RLNGKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGNTKAAKASKAATPDLGAVMKVLGVLERCSVLFLEQGGRYCMHSSHADFVRELITCFPLSRKRALGRW 1311
            A   KVP   P  ++WY+ R   ++ V            E L     PR+VGL G +G GK+TV S  V   +V+  F DGI WL V   GA+ RL  LML LA +VYE +         S   RP  +        ++ AAYIR  +       ++G G  +         + L+VAD+V+E EV+ +L   G WVL +T R+ + +               H +V+ +D +S+A+  +VLRRA+ L  + ++P  A+DLI+  G V MDL+++GRW  V G  D  AW  A++ V  E G+ G          TR     A+L AG  DLA    + + + LYLSLAV P G +FT  DAA LL+            +    D  +V  V+  LER +VL  EQG  Y MH +H+ F RE +      R+ A+ RW
Sbjct:   31 AKLTKVPKGTPARKSWYVKRRHVMDTV-----------FEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVND-GAKERLSSLMLQLARVVYEDI-------GCSVGRRPTSS--------DDCAAYIRQRM-------KKGTGGKKL--------KCLVVADNVWEKEVVSKLLETGMWVLLST-RNITLVTEA------------HGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKVGSGDASEKLAETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYD----------REPCAEDEASVAVVVDTLERWTVLRSEQGA-YRMHDAHSIFARETLMDHGYVRRPAVKRW 402          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18386.5708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK89_9PHAE6.000e-29894.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2X0_ECTSI1.160e-25192.02TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KZP3_9PHAE3.150e-8641.87NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
D7G5Y4_ECTSI7.190e-7839.91NB-ARC and TPR containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JI56_9PHAE1.740e-7738.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXU5_9PHAE5.230e-7739.46NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LT49_ECTSI3.040e-7538.84NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
A0A6H5JL31_9PHAE2.590e-6535.12NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FZY7_ECTSI3.670e-5234.96NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KYW3_9PHAE1.720e-4934.25NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18386contigEcto-sp13_S_contig18386:3..1793 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score726.9
Seed ortholog evalue6e-207
Seed eggNOG ortholog2880.D7G2X0
Model size1362
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759
Ec32 ortholog descriptionTPR repeat-containing protein
Ec32 orthologEc-09_004620.1
Cds size1362
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462945.0523863-CDS-Ecto-sp13_S_contig18386:2..2931681462945.0523863-CDS-Ecto-sp13_S_contig18386:2..293Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18386 3..293 -
1681462945.063599-CDS-Ecto-sp13_S_contig18386:722..17931681462945.063599-CDS-Ecto-sp13_S_contig18386:722..1793Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18386 723..1793 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18386.5708.1prot_Ecto-sp13_S_contig18386.5708.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18386 3..1793 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18386.5708.1

>prot_Ecto-sp13_S_contig18386.5708.1 ID=prot_Ecto-sp13_S_contig18386.5708.1|Name=mRNA_Ecto-sp13_S_contig18386.5708.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=454bp
ERNRVAYLASKVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVEDL
GDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGA
EHRLPDLMLLLANMVYETVLKSGEASRSSKKLRPPRTPGGVACDRENGAA
YIRGALGITSPSGEEGDGAGRSHEQRRWRPRYLIVADDVYEPEVLEELHG
IGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVL
RRASGLDAEAELPQPALDLIKSYGSVVMDLSYIGRWGVVHGTTDAKAWGV
ALNSVFLEGGEGGQEWTRRRWHTAVLFAGMADLARLNGKAKDLYLSLAVL
PKGLSFTPTDAAALLFGGGGNTKAAKASKAATPDLGAVMKVLGVLERCSV
LFLEQGGRYCMHSSHADFVRELITCFPLSRKRALGRWREHASTPAALFAW
PVED
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mRNA from alignment at Ecto-sp13_S_contig18386:3..1793-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18386.5708.1 ID=mRNA_Ecto-sp13_S_contig18386.5708.1|Name=mRNA_Ecto-sp13_S_contig18386.5708.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1791bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18386:3..1793- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGCGCAACAGAGTGGCGTACTTGGCGAGCAAGGTCAAGGTCCCGTCGAG GGCTCCACGGATCCAAGCCTGGTACATCCCTCGCAGCGAAACCGTCGAAG ACGTGTGTGCCCGCCTGGGAGTATGCTCCGGCAGCGCCGTCGAAGATCTC GGAGATCACGAGGAGCCCCGGATGGTGGGGCTTGCGGGGCCCACCGGCTG CGGGAAGTCGACGGTCACCTCCCTGGTGGTGGCACGGGAGGACGTCCGGG CGTACTTCCGCGACGGCATCGTCTGGCTGCCCGTGCGGGGGAAGGGCGCC GAGCACCGCCTTCCGGACCTCATGCTGCTCCTCGCCAACATGGTCTACGA GACGGTTCTCAAGAGCGGCGAGGCGTCGCGGTCATCGAAGAAGCTGCGGC CGCCGAGAACCCCGGGGGGCGTCGCCTGCGACCGCGAGAACGGGGCGGCG TACATCCGGGGCGCGCTGGGAATCACGTCTCCCAGCGGGGAGGAAGGCGA CGGAGCGGGAAGAAGCCATGAGCAGCGGCGGTGGCGGCCGAGGTACCTGA TCGTAGCTGACGACGTCTACGAGCCGGAGGTGCTGGAGGAGTTGCACGGG ATTGGGGCGTGGGTGCTGTACACCACCACCCGCTCGGCAAGCTTTATCCG GCGCAACGGCGAACGCAGCGAAGGCGATGGCGATGGCGGTGACCACGCTG ACGTGCTGCGGCTGGACAATATCTCGGACGCCGAGGGGGAGACCGTGCTG CGGCGAGCCAGCGGCCTGGACGCGGAAGCCGAGCTCCCGCAGCCGGCCCT TGACCTCATCAAGTCGTACGGCTCGGTGGTGATGGACCTGTCTTACATCG GGCGTTGGGGAGTAGTCCACGGCACGACGGATGCCAAGGCCTGGGGAGTG GCGCTTAACAGCGTATTTCTCGAGGGCGGGGAAGGGGGGCAGGAGTGGAC GCGGCGGCGATGGCACACGGCGGTGCTCTTCGCCGGGATGGCGGACCTCG CACGCCTGAACGGCAAGGCAAAGGACCTGTACCTCTCCCTCGCGGTCCTG CCGAAGGGCCTATCCTTCACGGTAAGCAATCCACCAAGCGGCCGAAAACG GTCATGTTCCTACATTCACTCGAGCGTTTTGAACATACGTCCGGCATTCG TTGTATTCATCTTCTTCCCTCATTCAGAGCAGATTGTGCTACCACCAAAG CTGTTCGTATTTTATTTTTGCCAGTCGAGGTATGTTGTGGATGCTGTTGC ACGCCGGATCTGTCTCTAATTGCTCCGTTCCCTCGTGCCCGCTCGGGCTA CTTTTCGCCTTACGATGATGGCGATAACGTTTGATTTTCGTCAGGAAACG ACTTCAAAACTTGAGCCACCGCCACCACTACCACCGGTCCCGTTTGTCCT CTCTATCTCTCTCTCTGTCTCTCTCTGTCTCTGTCTCTCTGTCCCTCTCT CCCTCTCTCTTTGTCTCTCTCCGGCCCCCCTTCAACCGCGGTGCATGCAG CCCACCGACGCCGCGGCCTTGCTCTTCGGAGGCGGGGGCAACACCAAGGC AGCAAAAGCATCAAAAGCAGCAACACCCGACCTCGGCGCCGTCATGAAAG TCTTGGGGGTCCTCGAGCGGTGCTCGGTGCTCTTCCTCGAGCAGGGCGGA AGGTACTGCATGCACAGCTCGCACGCCGACTTCGTCCGCGAGCTCATCAC CTGCTTCCCCCTGTCGAGGAAGCGGGCGCTGGGCCGCTGGCGGGAGCACG CCTCCACCCCCGCCGCCCTGTTCGCCTGGCCCGTCGAGGAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18386:3..1793-

>mRNA_Ecto-sp13_S_contig18386.5708.1 ID=mRNA_Ecto-sp13_S_contig18386.5708.1|Name=mRNA_Ecto-sp13_S_contig18386.5708.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1362bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18386:3..1793- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGCGCAACAGAGTGGCGTACTTGGCGAGCAAGGTCAAGGTCCCGTCGAG
GGCTCCACGGATCCAAGCCTGGTACATCCCTCGCAGCGAAACCGTCGAAG
ACGTGTGTGCCCGCCTGGGAGTATGCTCCGGCAGCGCCGTCGAAGATCTC
GGAGATCACGAGGAGCCCCGGATGGTGGGGCTTGCGGGGCCCACCGGCTG
CGGGAAGTCGACGGTCACCTCCCTGGTGGTGGCACGGGAGGACGTCCGGG
CGTACTTCCGCGACGGCATCGTCTGGCTGCCCGTGCGGGGGAAGGGCGCC
GAGCACCGCCTTCCGGACCTCATGCTGCTCCTCGCCAACATGGTCTACGA
GACGGTTCTCAAGAGCGGCGAGGCGTCGCGGTCATCGAAGAAGCTGCGGC
CGCCGAGAACCCCGGGGGGCGTCGCCTGCGACCGCGAGAACGGGGCGGCG
TACATCCGGGGCGCGCTGGGAATCACGTCTCCCAGCGGGGAGGAAGGCGA
CGGAGCGGGAAGAAGCCATGAGCAGCGGCGGTGGCGGCCGAGGTACCTGA
TCGTAGCTGACGACGTCTACGAGCCGGAGGTGCTGGAGGAGTTGCACGGG
ATTGGGGCGTGGGTGCTGTACACCACCACCCGCTCGGCAAGCTTTATCCG
GCGCAACGGCGAACGCAGCGAAGGCGATGGCGATGGCGGTGACCACGCTG
ACGTGCTGCGGCTGGACAATATCTCGGACGCCGAGGGGGAGACCGTGCTG
CGGCGAGCCAGCGGCCTGGACGCGGAAGCCGAGCTCCCGCAGCCGGCCCT
TGACCTCATCAAGTCGTACGGCTCGGTGGTGATGGACCTGTCTTACATCG
GGCGTTGGGGAGTAGTCCACGGCACGACGGATGCCAAGGCCTGGGGAGTG
GCGCTTAACAGCGTATTTCTCGAGGGCGGGGAAGGGGGGCAGGAGTGGAC
GCGGCGGCGATGGCACACGGCGGTGCTCTTCGCCGGGATGGCGGACCTCG
CACGCCTGAACGGCAAGGCAAAGGACCTGTACCTCTCCCTCGCGGTCCTG
CCGAAGGGCCTATCCTTCACGCCCACCGACGCCGCGGCCTTGCTCTTCGG
AGGCGGGGGCAACACCAAGGCAGCAAAAGCATCAAAAGCAGCAACACCCG
ACCTCGGCGCCGTCATGAAAGTCTTGGGGGTCCTCGAGCGGTGCTCGGTG
CTCTTCCTCGAGCAGGGCGGAAGGTACTGCATGCACAGCTCGCACGCCGA
CTTCGTCCGCGAGCTCATCACCTGCTTCCCCCTGTCGAGGAAGCGGGCGC
TGGGCCGCTGGCGGGAGCACGCCTCCACCCCCGCCGCCCTGTTCGCCTGG
CCCGTCGAGGAC
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