mRNA_Ecto-sp13_S_contig18362.5701.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5J7W8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7W8_9PHAE) HSP 1 Score: 411 bits (1056), Expect = 3.830e-139 Identity = 279/306 (91.18%), Postives = 284/306 (92.81%), Query Frame = 1
Query: 10 QAVHSRVTPHAGTQQGVPPGAVMMPGFSDDADRQARQAALVKVLNDKQFGDAPQKSWTESESGDDXXXXXGSPMSTGSSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKEDTPELEDSXXXXXXXXXXXXXXXXXXXXXSGSITER 927
QAVHSRVTPH GTQQG+PPGAVMMPGFSDDADRQARQAALVKVLNDK+FGDAPQK WTESESG XXXXX SNVS+EDSSAPSD GSQSGDVVFEKEIREAMTG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKK G+DYPHWATHFLKRTC HRKIPRMSQKSKG LVAALRSLDANMKRPSPYFDDLDAI AGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKE+TPELEDS XXXXXXXXXXXXXXXXXXSGSITER
Sbjct: 55 QAVHSRVTPHTGTQQGIPPGAVMMPGFSDDADRQARQAALVKVLNDKRFGDAPQKKWTESESGGXXXXXXXXXXXXXXSNVSLEDSSAPSDSGSQSGDVVFEKEIREAMTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKDRGKDYPHWATHFLKRTCGHRKIPRMSQKSKGVLVAALRSLDANMKRPSPYFDDLDAIAAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKENTPELEDSAGGXXXXXXXXXXXXXXXXXXSGSITER 360
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5KFU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU0_9PHAE) HSP 1 Score: 412 bits (1058), Expect = 1.140e-137 Identity = 279/306 (91.18%), Postives = 285/306 (93.14%), Query Frame = 1
Query: 10 QAVHSRVTPHAGTQQGVPPGAVMMPGFSDDADRQARQAALVKVLNDKQFGDAPQKSWTESESGDDXXXXXGSPMSTGSSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKEDTPELEDSXXXXXXXXXXXXXXXXXXXXXSGSITER 927
QAVHSRVTP GTQQG+PPGAVMMPGFSDDADRQARQAALVKVLNDK+FGDAPQK WTESESG DXXXXX SNVS+EDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKK G+DYPHWATHFLKRTC HRKIPRMSQKSKG LVAALRSLDANMKRPSPYFDDLDAI AGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEG+DYSV DLYDAMEKE+TPELEDS XXXXXXXXXXXXXXXXXXSGSITER
Sbjct: 55 QAVHSRVTPLTGTQQGIPPGAVMMPGFSDDADRQARQAALVKVLNDKRFGDAPQKKWTESESGGDXXXXXXXXXXXXXSNVSLEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKDRGKDYPHWATHFLKRTCGHRKIPRMSQKSKGVLVAALRSLDANMKRPSPYFDDLDAIAAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGMDYSVTDLYDAMEKENTPELEDSAGGXXXXXXXXXXXXXXXXXXSGSITER 360
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5JWQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ7_9PHAE) HSP 1 Score: 392 bits (1007), Expect = 2.500e-132 Identity = 271/307 (88.27%), Postives = 278/307 (90.55%), Query Frame = 1
Query: 10 QAVHSRVTPHAGTQQGVPPGAVMMPGFSDDADRQARQAALVKVLNDKQFGDAPQKSWTESESGDDXXXXXGSPMSTGSSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEE-GVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKEDTPELEDSXXXXXXXXXXXXXXXXXXXXXSGSITER 927
QAVHSRVTPH GTQQGVPPGAVMMPGFSDDADRQARQAALVKVLNDK+FGDAPQK+WTESESGD XXXXX GSSNVSVEDSSA SDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKA G+DYPHWATHFLKR CAHRKIPRMSQK+K LVA LR LDANMKRPS +FDDLDAI A K G GSEQEEGEE G IPA+ LLMFRGV+NMVALARDRT PFTVEGVDYSVADLYDAMEKED PELEDS XXXXXXXXXXXXXXXXX SGSITER
Sbjct: 55 QAVHSRVTPHTGTQQGVPPGAVMMPGFSDDADRQARQAALVKVLNDKRFGDAPQKNWTESESGDXXXXXXXXXXXXGSSNVSVEDSSALSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKARGKDYPHWATHFLKRICAHRKIPRMSQKTKDVLVATLRPLDANMKRPSTHFDDLDAIAASKPGHGSEQEEGEEEGAIPARTLLMFRGVVNMVALARDRTGPFTVEGVDYSVADLYDAMEKEDKPELEDSAGXXXXXXXXXXXXXXXXXEGSGSITER 361
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5JSN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN7_9PHAE) HSP 1 Score: 318 bits (815), Expect = 8.320e-101 Identity = 183/262 (69.85%), Postives = 196/262 (74.81%), Query Frame = 1
Query: 67 GAVMMPGFSDDADRQARQAALVKVLNDKQFGDAPQKSWTESESGDDXXXXXGSPMSTGSSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSG--RGSEQEEGEE-GVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKEDTPELEDS 843
GA MMPGFSDDA RQARQAA+ KVLNDK+F DAPQ++W+ESESGDD GSP S+GSSNVS+EDSSAPSDI SQSGDVVFEKEIREAMTGG AS+KKA G+DYPH ATHFLKRTCAHRKIPRM Q SK LVAALRSLDANMKR SPYFDDLDAI AGKSG RGSEQEEGEE IPAKA+ FRGV+NMVA ARD TEPF E VDYSVA+L+DAME ED PEL DS
Sbjct: 43 GAGMMPGFSDDAARQARQAAVAKVLNDKRFCDAPQRNWSESESGDDNDGE-GSPTSSGSSNVSIEDSSAPSDICSQSGDVVFEKEIREAMTGGGGAGARTKNHGKRKASAGGSVVGKYKAAASHHASSKKARGKDYPHLATHFLKRTCAHRKIPRMWQSSKDLLVAALRSLDANMKRSSPYFDDLDAIAAGKSGCGRGSEQEEGEEEAAIPAKAMPTFRGVVNMVAQARDSTEPFIFEDVDYSVANLFDAME-EDKPELGDS 302
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5K9E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E4_9PHAE) HSP 1 Score: 299 bits (765), Expect = 4.980e-97 Identity = 180/285 (63.16%), Postives = 184/285 (64.56%), Query Frame = 1
Query: 76 MMPGFSDDADRQARQAALVKVLNDKQFGDAPQKSWTESESGDDXXXXXGSPMSTGSSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEE-GVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKEDTPELEDSXXXXXXXXXXXXXXXXXXXXXSGSITER 927
MMPGFSDDADRQARQAALVK S + SSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGG ASAKKA G+DYPHWATHFLKRTCAHRKIPR SQK K LV ALRS DANMK PSPYFDDLDAI AG+SGRGSEQEEGEE G IPAKALLM RGV+NMVALARDRTEPFTVEGVD SVADLYDAMEKE PELEDS SGSITER
Sbjct: 1 MMPGFSDDADRQARQAALVK-----------------------------SDVKWQSSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGGGGAGTRTTNHGKREASACGSVVGKNKAAASHHASAKKARGKDYPHWATHFLKRTCAHRKIPRKSQKIKDVLVVALRSFDANMKWPSPYFDDLDAIAAGESGRGSEQEEGEEEGAIPAKALLMLRGVVNMVALARDRTEPFTVEGVDCSVADLYDAMEKEAKPELEDSAGGTGG---------------SGSITER 241
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5JT27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT27_9PHAE) HSP 1 Score: 284 bits (726), Expect = 1.450e-92 Identity = 190/214 (88.79%), Postives = 197/214 (92.06%), Query Frame = 1
Query: 1 MARQAVHSRVTPHAGTQQGVPPGAVMMPGFSDDADRQARQAALVKVLNDKQFGDAPQKSWTESESGDDXXXXXGSPMSTGSSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGK 642
MARQAVHSRVTP GTQQG+PPGAVMMPGFSD+A+RQARQAALVKVLNDK+FGDAPQK WTESESG DXXXXX SNVS+EDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKK G+DYPHWATHFLKRTC HRKIPRMSQKSKG LVAALRSLDANMKRPSPYFDDLDAI AG+
Sbjct: 1 MARQAVHSRVTPLTGTQQGIPPGAVMMPGFSDNANRQARQAALVKVLNDKRFGDAPQKKWTESESGGDXXXXXXXXXXXXXSNVSLEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKDRGKDYPHWATHFLKRTCGHRKIPRMSQKSKGVLVAALRSLDANMKRPSPYFDDLDAIAAGE 214
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5JZX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX9_9PHAE) HSP 1 Score: 270 bits (691), Expect = 5.140e-84 Identity = 158/162 (97.53%), Postives = 159/162 (98.15%), Query Frame = 1
Query: 442 ASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKEDTPELEDSXXXXXXXXXXXXXXXXXXXXXSGSITER 927
ASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKE+TPELEDS XXXXXXXXXXXXXXXXXXSGSITER
Sbjct: 37 ASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKENTPELEDSAGGXXXXXXXXXXXXXXXXXXSGSITER 198
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5JD97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD97_9PHAE) HSP 1 Score: 258 bits (659), Expect = 5.400e-82 Identity = 152/162 (93.83%), Postives = 155/162 (95.68%), Query Frame = 1
Query: 442 ASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKEDTPELEDSXXXXXXXXXXXXXXXXXXXXXSGSITER 927
ASAKKA G+DYPHWATHFLKRTCAHRKIPRMSQ+SKG LVAALR LDANMKRPSPYFDDLDAI AGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKED PELEDS XXXXXXXXXXXXXXXXXXXSG+ITER
Sbjct: 37 ASAKKARGKDYPHWATHFLKRTCAHRKIPRMSQRSKGVLVAALRPLDANMKRPSPYFDDLDAIAAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKEDKPELEDSAGXXXXXXXXXXXXXXXXXXXSGNITER 198
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5KIT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIT8_9PHAE) HSP 1 Score: 261 bits (667), Expect = 1.390e-81 Identity = 178/279 (63.80%), Postives = 188/279 (67.38%), Query Frame = 1
Query: 10 QAVHSRVTPHAGTQQGVPPGAVMM--PGFSDDADRQARQAALVKVLNDKQFGDAPQKSWTESESGDDXXXXXGSPMSTGSSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEE-GVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYS-VADLYDAMEKEDTPEL 834
QAVHSRVTP GTQ G G+ G DADRQA QAALV+VLNDK+FGDAP K+WTESESGDD +D XXXXXXXXXXXXXXX X ASAKKA G+DYPH ATHFLKRTCAHR+IPRMSQKSK LVAALRSLDANMKRPSPYFDDLDAI AGKSGRGSEQE GEE G IPA ALLMFRGV+N VALARDRTEPFTVEGVDYS VADL+DAMEK+D EL
Sbjct: 55 QAVHSRVTPRTGTQHG---GSTWRGDDGGLLDADRQAGQAALVRVLNDKRFGDAPHKNWTESESGDD------------------DDEGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKTKILLCXKAAASHHASAKKARGKDYPHSATHFLKRTCAHRQIPRMSQKSKDVLVAALRSLDANMKRPSPYFDDLDAIAAGKSGRGSEQEGGEEEGAIPANALLMFRGVVNTVALARDRTEPFTVEGVDYSSVADLFDAMEKDDKLEL 312
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5KKV3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKV3_9PHAE) HSP 1 Score: 267 bits (683), Expect = 1.230e-80 Identity = 162/320 (50.62%), Postives = 189/320 (59.06%), Query Frame = 1
Query: 1 MARQAVHSRVTPHAGTQQGVPPGAVMMPGFSDDADRQARQAALVKVLNDKQFGDAPQKSWTESESGDDXXXXXGSPMSTGSSNVSVEDSSAPSDIGSQ------SGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKS-KGFLVAALRSLDANMKRPSPYFDDLDAIVAG---------------------------------------KSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKED 822
M RQAVHSRVTPH TQQGVPPGA +MPG D +AR+ A+ +LNDKQFG+A K+W+ES+S DD +PMS+GSSNVSVE+SSAPSDI SQ SGD VF KEIREA+ GG ASAKKA G+DYP WA H L+RTCAHRKIPRMS++ K LV ALRS D NM RPSPY+DDL+AI AG KSGR + +E+ EEG IPAKALL FR V+ MVA+ARD PF V+ V+YS DLYDA+ KED
Sbjct: 54 MVRQAVHSRVTPHTDTQQGVPPGAGLMPGLMDTEGTKARRVAVSMILNDKQFGEASGKNWSESDSSDDDNGKD-APMSSGSSNVSVEESSAPSDIISQEPGDVESGDSVFAKEIREAIFGGGGAGRKKTHGKRKASAGGSAVGNRNSTKASLGASAKKARGKDYPLWAAHLLRRTCAHRKIPRMSKEGDKHVLVQALRSHDGNMNRPSPYYDDLNAITAGNMRNMEFCSGWGCTPEASSHAKAYSLCGPLSPIPNARAGKSGRSNGEEDEEEGAIPAKALLTFRNVVGMVAIARDSKVPFKVDNVEYSAVDLYDALAKED 372 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18362.5701.1 >prot_Ecto-sp13_S_contig18362.5701.1 ID=prot_Ecto-sp13_S_contig18362.5701.1|Name=mRNA_Ecto-sp13_S_contig18362.5701.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=309bp MARQAVHSRVTPHAGTQQGVPPGAVMMPGFSDDADRQARQAALVKVLNDKback to top mRNA from alignment at Ecto-sp13_S_contig18362:1473..2908+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18362.5701.1 ID=mRNA_Ecto-sp13_S_contig18362.5701.1|Name=mRNA_Ecto-sp13_S_contig18362.5701.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1436bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18362:1473..2908+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18362:1473..2908+ >mRNA_Ecto-sp13_S_contig18362.5701.1 ID=mRNA_Ecto-sp13_S_contig18362.5701.1|Name=mRNA_Ecto-sp13_S_contig18362.5701.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=927bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18362:1473..2908+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |