mRNA_Ecto-sp13_S_contig18312.5685.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18312.5685.1 vs. uniprot
Match: D7FTM6_ECTSI (Putative fusion of putative sugar/xylulosekinase and ribulose-phosphate epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM6_ECTSI) HSP 1 Score: 403 bits (1035), Expect = 2.110e-137 Identity = 222/235 (94.47%), Postives = 226/235 (96.17%), Query Frame = 1
Query: 1 VCLDHFQGNRTPYTDPLSRGVLAGLTLKHGRGHMFRGLIESVCLGTELVLEAMRKAGYTPSSVAVAGGATNSRLWLQTHADVGNVPMKVTREREACVLGSAILAAVGGGLFPDIPSAARAMVHVEGTVIPNPEAHAKYKRVLERYRTVYPALKPVFRDQGAGAPPXXXXXXXXXXXXXXXXXAEGETGAVVVGLVNASILAADMADLSGEVERVMAAGADWIHVDVVDNVFAKVL 705
VCLDHFQGNRTPYTDPLSRG LAGLTLKHGRGH+FRGLIESVCLGTELV EAMRKAGYTPSSVAVAGGATNSRLWLQTHADV NVPMKVTREREACVLGSAILAAVGGGLFPDIPSAARAMVHVEGTV+PNPEAHA+YKRVLERYR VYPALKP+FRDQGAGAPP XXXXXXXXXXXXXXX EGET AVV GLVNASILAADMADLSGEVERVMAAGADWIHVDVVDNVFAKVL
Sbjct: 38 VCLDHFQGNRTPYTDPLSRGALAGLTLKHGRGHVFRGLIESVCLGTELVFEAMRKAGYTPSSVAVAGGATNSRLWLQTHADVSNVPMKVTREREACVLGSAILAAVGGGLFPDIPSAARAMVHVEGTVMPNPEAHAEYKRVLERYRAVYPALKPLFRDQGAGAPPTAXXXXXXXXXXXXXXXXEGETAAVV-GLVNASILAADMADLSGEVERVMAAGADWIHVDVVDNVFAKVL 271
BLAST of mRNA_Ecto-sp13_S_contig18312.5685.1 vs. uniprot
Match: A0A6H5K691_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K691_9PHAE) HSP 1 Score: 410 bits (1054), Expect = 2.750e-136 Identity = 226/235 (96.17%), Postives = 229/235 (97.45%), Query Frame = 1
Query: 1 VCLDHFQGNRTPYTDPLSRGVLAGLTLKHGRGHMFRGLIESVCLGTELVLEAMRKAGYTPSSVAVAGGATNSRLWLQTHADVGNVPMKVTREREACVLGSAILAAVGGGLFPDIPSAARAMVHVEGTVIPNPEAHAKYKRVLERYRTVYPALKPVFRDQGAGAPPXXXXXXXXXXXXXXXXXAEGETGAVVVGLVNASILAADMADLSGEVERVMAAGADWIHVDVVDNVFAKVL 705
VCLDHFQGNRTPYTDPLSRG LAGLTLKHGRGH+FRGLIESVCLGTELV EAMRKAGYTPSSVAVAGGATNSRLWLQTHADV NVPMKVTREREAC+LGSAILAAVGGGLFPDIPSAARAMVHVEGTV+PNPEAHAKYKRVLERYR VYPALKPVFRDQGAGAP XXXXXXXXXXXXXXXXXAEGETGA VVGLVNASILAADMADLSGEVERVMAAGADWIHVDVVDNVFAKVL
Sbjct: 346 VCLDHFQGNRTPYTDPLSRGALAGLTLKHGRGHIFRGLIESVCLGTELVFEAMRKAGYTPSSVAVAGGATNSRLWLQTHADVSNVPMKVTREREACLLGSAILAAVGGGLFPDIPSAARAMVHVEGTVMPNPEAHAKYKRVLERYRAVYPALKPVFRDQGAGAPXXXXXXXXXXXXXXXXXXAEGETGAAVVGLVNASILAADMADLSGEVERVMAAGADWIHVDVVDNVFAKVL 580
BLAST of mRNA_Ecto-sp13_S_contig18312.5685.1 vs. uniprot
Match: A0A2P6TT72_CHLSO (Glycerol kinase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TT72_CHLSO) HSP 1 Score: 254 bits (649), Expect = 2.170e-76 Identity = 133/242 (54.96%), Postives = 165/242 (68.18%), Query Frame = 1
Query: 1 VCLDHFQGNRTPYTDPLSRGVLAGLTLKHGRGHMFRGLIESVCLGTELVLEAMRKAGYTPSSVAVAGGATNSRLWLQTHADVGNVPMKVTREREACVLGSAILAAVGGGLFPDIPSAARAMVHVEGTVIPNPEAHAKYKRVLERYRTVYPALKPVF------RDQGAGAPPXXXXXXXXXXXXXXXXXAEGETGAVVVG-----LVNASILAADMADLSGEVERVMAAGADWIHVDVVDNVF 693
VCLDHFQGNRTP+TD LSRG + GLTLKHGRGH+FR LIES+C GTE +LE MR AG+TP SV VAGGAT S LWLQTHADV NVP +T+ +A LG AILAAV GLFPD+P+A AMVH + V P+P+ HA+Y+R + Y+ +YPALKP F + QGA AP A G + +V G +V+ SIL+AD A L+ +V+RV+ AGA+W+HVD+ D VF
Sbjct: 342 VCLDHFQGNRTPHTDALSRGAITGLTLKHGRGHVFRALIESICFGTEHILETMRAAGFTPDSVTVAGGATRSELWLQTHADVSNVPFILTKVSDAPALGCAILAAVAAGLFPDVPAACAAMVHQDRVVQPDPQRHAEYQRHFQAYKALYPALKPGFHTAAGQQQQGAAAP-------------AAAEAANGSSRSVSKGDDLHSIVSPSILSADFAHLARDVDRVVRAGAEWVHVDIFDGVF 570
BLAST of mRNA_Ecto-sp13_S_contig18312.5685.1 vs. uniprot
Match: A0A835YTS4_9STRA (Glycerol kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTS4_9STRA) HSP 1 Score: 250 bits (638), Expect = 1.330e-74 Identity = 135/246 (54.88%), Postives = 166/246 (67.48%), Query Frame = 1
Query: 1 VCLDHFQGNRTPYTDPLSRGVLAGLTLKHGRGHMFRGLIESVCLGTELVLEAMRKAGYTPSSVAVAGGATNSRLWLQTHADVGNVPMKVTRE-REACVLGSAILAAVGGGLFPDIPSAARAMVHVEGTVIPNPEAHAKYKRVLERYRTVYPALKPVFRDQGAGAP-------PXXXXXXXXXXXXXXXXXAEGE---TGAVVVGLVNASILAADMADLSGEVERVMAAGADWIHVDVVDNVFAKVL 705
+CLDHFQGNRTP+TDP SRG +GL+L H RGHMFR ++E V +GTELVLEAMRKAGY P+S+AVAGGA S LWLQ HADV VP+ +T+ +AC+LGSA+LAAVG GL+ IP AA AMV +E T++P+ AHA Y V+ YR +Y +LKP+F Q G+ XX A G+ T A V G+V+ASILAAD AD GE ER + AGA W HVD+VD FAK+L
Sbjct: 350 LCLDHFQGNRTPFTDPHSRGAFSGLSLGHTRGHMFRAVLEGVSMGTELVLEAMRKAGYQPTSIAVAGGAARSPLWLQLHADVCGVPLHITKGGTDACLLGSAMLAAVGAGLYDSIPGAAAAMVKIERTILPDKNAHAAYGPVIAHYRRLYTSLKPLFHSQAGGSAGXXXXXXXXXVTLGDKLGKPLAAVRARGDALRTAADVRGIVDASILAADFADFGGEAERALEAGAQWCHVDIVDGHFAKIL 595
BLAST of mRNA_Ecto-sp13_S_contig18312.5685.1 vs. uniprot
Match: A0A061SEI4_9CHLO (Glycerol kinase (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SEI4_9CHLO) HSP 1 Score: 244 bits (623), Expect = 1.250e-72 Identity = 127/231 (54.98%), Postives = 154/231 (66.67%), Query Frame = 1
Query: 1 VCLDHFQGNRTPYTDPLSRGVLAGLTLKHGRGHMFRGLIESVCLGTELVLEAMRKAGYTPSSVAVAGGATNSRLWLQTHADVGNVPMKVTREREACVLGSAILAAVGGGLFPDIPSAARAMVHVEGTVIPNPEAHAKYKRVLERYRTVYPALKPVFRDQGAGAPPXXXXXXXXXXXXXXXXXAEGETGAVVVGLVNASILAADMADLSGEVERVMAAGADWIHVDVVDNVF 693
V LDHFQGNRTP+TDPLSRG L GLTLKH R H+FR LIE+VC GTELVLEA R AG++PSS+ +AGG T S LWLQ HADV N+P ++TR +A LG AILAA G FPD+ SA AMV V+ V+P+P+ H +Y+R+LE YR++YPAL P FR A AP E +V+AS LAAD A+L+ +V +AAGADWIHVDV D F
Sbjct: 358 VALDHFQGNRTPHTDPLSRGALVGLTLKHTRAHIFRALIEAVCFGTELVLEAQRAAGFSPSSITIAGGVTRSPLWLQIHADVSNLPFRLTRNADAPALGCAILAATAAGAFPDVGSAVAAMVAVDRVVLPDPDRHREYRRLLEVYRSLYPALAPTFRGGVAAAP--------GTPPAPDGRSVEHFRARPTAPIVSASTLAADAANLAADVRAALAAGADWIHVDVCDGNF 580
BLAST of mRNA_Ecto-sp13_S_contig18312.5685.1 vs. uniprot
Match: A0A0D2NQU3_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2NQU3_9CHLO) HSP 1 Score: 243 bits (619), Expect = 1.020e-71 Identity = 130/243 (53.50%), Postives = 158/243 (65.02%), Query Frame = 1
Query: 1 VCLDHFQGNRTPYTDPLSRGVLAGLTLKHGRGHMFRGLIESVCLGTELVLEAMRKAGYTPSSVAVAGGATNSRLWLQTHADVGNVPMKVTREREACVLGSAILAAVGGGLFPDIPSAARAMVHVEGTVIPNPEAHAKYKRVL-ERYRTVYPALKPVFRDQGAGAPPXXXXXXXXXXXXXXXXXAEGET-------------GAVVVGLVNASILAADMADLSGEVERVMAAGADWIHVDVVDN 687
VCLDHFQGNRTP+TDPLSRG L GLTLKH RGH+FRGL+E+V GTE VLEAMR AGY+P+S+ +AGGAT S LW+Q HADV N+P+ +T +A LG AILAAV GL PDIP+A +AMV V T+ P+P+ HA Y+R+ ERY +YPAL+P+F AP A G + +V+ SILAAD A L EVERV+AAGADWIHVD+ D
Sbjct: 340 VCLDHFQGNRTPHTDPLSRGALVGLTLKHTRGHVFRGLVEAVAFGTEAVLEAMRGAGYSPTSLTIAGGATKSELWMQVHADVSNLPLHLTEVPDAPALGCAILAAVAAGLHPDIPTAVKAMVRVSRTITPDPQRHAVYRRLYQERYSKLYPALRPLFHAGHDHAPTPNGAPAVEEGASGQWAAAAXXXXXXXXXXXXXXXGGGLPRAIVSPSILAADFACLGDEVERVLAAGADWIHVDMFDG 582
BLAST of mRNA_Ecto-sp13_S_contig18312.5685.1 vs. uniprot
Match: A0A2P6VDM7_9CHLO (Glycerol kinase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VDM7_9CHLO) HSP 1 Score: 235 bits (600), Expect = 3.690e-69 Identity = 130/231 (56.28%), Postives = 163/231 (70.56%), Query Frame = 1
Query: 1 VCLDHFQGNRTPYTDPLSRGVLAGLTLKHGRGHMFRGLIESVCLGTELVLEAMRKAGYTPSSVAVAGGATNSRLWLQTHADVGNVPMKVTREREACVLGSAILAAVGGGLFPDIPSAARAMVHVEGTVIPNPEAHAKYKRVLERYRTVYPALKPVFRDQGAGAPPXXXXXXXXXXXXXXXXXAEGETGAVVVGLVNASILAADMADLSGEVERVMAAGADWIHVDVVDNVF 693
+CLDHFQGNRTP+TD LSRG +AGLTL+HGRGH+FR LIE++C GTE + E MR GY+P+SV VAGGAT S LWLQTHADV NVP +T+ +A LG AILAAV GL PD+P+A AMVH + V P+P+ HA+Y Y+ +YPAL+P F A XXXXXXXXXX A+ + +V+ SIL+AD A+L +V+RV+ AGA+W+HVDV D VF
Sbjct: 341 LCLDHFQGNRTPHTDALSRGAIAGLTLRHGRGHLFRALIEAICFGTEHIFETMRGQGYSPASVTVAGGATRSDLWLQTHADVSNVPFVLTKVSDAPALGCAILAAVAAGLHPDVPAACAAMVHQDRVVQPDPQRHAEYASHYAAYKQLYPALQPGFHAAAARCAXXXXXXXXXXXAEALARRAQ------LHSIVSPSILSADFANLQSDVQRVVDAGAEWVHVDVFDGVF 565
BLAST of mRNA_Ecto-sp13_S_contig18312.5685.1 vs. uniprot
Match: C1MQP7_MICPC (Glycerol kinase n=3 Tax=Micromonas pusilla TaxID=38833 RepID=C1MQP7_MICPC) HSP 1 Score: 228 bits (582), Expect = 1.100e-66 Identity = 117/233 (50.21%), Postives = 147/233 (63.09%), Query Frame = 1
Query: 1 VCLDHFQGNRTPYTDPLSRGVLAGLTLKHGRGHMFRGLIESVCLGTELVLEAMRKAGYTPSSVAVAGGATNSRLWLQTHADVGNVPMKVTREREACVLGSAILAAVGGGLFPDIPSAARAMVHVEGTVIPNPEAHAKYKRVLERYRTVYPALKPVFRDQGAGAPPXXXXXXXXXXXXXXXXXAEGETGAVVVGLVNASILAADMADLSGEVERVMAAGADWIHVDVVDNVFAK 699
V +H QGNRTP+TDPLSRGV++GLTL+HGR H+FR ++E + GT L+ +AM GY PS V VAGGAT S LWLQ HADV NVP K T+ +A LG+AILAAVG G + + AARAMVH+EG V P PE HA+Y R Y+ YPAL+ V QG+ A A+ T V + S+LAAD DL+GEV R++ GADW+HVD++D F
Sbjct: 344 VVQEHLQGNRTPHTDPLSRGVVSGLTLRHGRAHVFRAILEGISFGTRLIFDAMEANGYKPSEVVVAGGATRSDLWLQIHADVANVPFKRTKCADAPALGAAILAAVGAGCYATVADAARAMVHMEGVVHPRPEVHAQYARAYAAYKATYPALRRVIHRQGSEA-----------AFATSVDDADAATDETPVAKIAPSLLAADQGDLAGEVSRMIHDGADWLHVDIMDGHFVN 565
BLAST of mRNA_Ecto-sp13_S_contig18312.5685.1 vs. uniprot
Match: A0A383W972_TETOB (Glycerol kinase n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W972_TETOB) HSP 1 Score: 228 bits (582), Expect = 1.910e-66 Identity = 137/236 (58.05%), Postives = 166/236 (70.34%), Query Frame = 1
Query: 1 VCLDHFQGNRTPYTDPLSRGVLAGLTLKHGRGHMFRGLIESVCLGTELVLEAMRKAGYTPSSVAVAGGATNSRLWLQTHADVGNVPMKVTREREACVLGSAILAAVGGGLFPDIPSAARAMVHVEGTVIPNPEAHAKYKRVLERYRTVYPALKPVFR----DQGAGAPPXXXXXXXXXXXXXXXXXAEGETGAVVVGLVNASILAADMADLSGEVERVMAAGADWIHVDVVDNVFA 696
+C DHFQGNRTPYTD SRG L GLTLKHG+ H+FR ++E+V GTEL+LE MR+ GY P S+ +AGGAT S LWLQ HADV N+P+++T +A LG AILAAV GL PDI SA RAMVHV V PNPE HA+Y R Y+ +YPALK V Q XXXXXXXXXXXXXXXXX G+++ +++ SILAAD A+L+ EV V AAGA+W+HVD+ D FA
Sbjct: 344 LCCDHFQGNRTPYTDAASRGALVGLTLKHGKAHVFRAMMEAVAFGTELILENMRQGGYHPDSLTLAGGATKSDLWLQIHADVSNLPLRLTEVSDAPALGCAILAAVAAGLHPDIRSAVRAMVHVSRVVQPNPERHAEYARFYNAYKALYPALKTVRLAMEPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSLLPAIISPSILAADFANLAQEVASVQAAGAEWVHVDMFDGSFA 579
BLAST of mRNA_Ecto-sp13_S_contig18312.5685.1 vs. uniprot
Match: A0A2V0NZK0_9CHLO (Glycerol kinase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NZK0_9CHLO) HSP 1 Score: 222 bits (566), Expect = 5.460e-64 Identity = 141/255 (55.29%), Postives = 165/255 (64.71%), Query Frame = 1
Query: 1 VCLDHFQGNRTPYTDPLSRGVLAGLTLKHGRGHMFRGLIESVCLGTELVLEAMRKAGYTPSSVAVAGGATNSRLWLQTHADVGNVPMKVTREREACVLGSAILAAVGGGLFPDIPSAARAMVHVEGTVIPNPEAHAKYKRVL-ERYRTVYPALKPVFRDQGAGA-------------PPXXXXXXXXXXXXXXXXXAEGETGAVVVG------------LVNASILAADMADLSGEVERVMAAGADWIHVDVVDN 687
V LDHFQGNRTP+TDPLSRG L GLTLKH RGH+FR L+E+VC GTE VL AMR AG++PSS+ VAGGAT S LWLQ HADV N+P+ +T +A LG AILAAV GL PD+P+A AMV V TV P+P HA+Y R+ ERY +YPALK +F A XXXXXXXXXXXXX A G V VG +++ SILAAD A L EV RV+A GADW+HVD+ D
Sbjct: 344 VALDHFQGNRTPHTDPLSRGALVGLTLKHTRGHVFRALMEAVCFGTEAVLAAMRAAGFSPSSLTVAGGATKSDLWLQIHADVTNLPLHLTEVSDAPALGCAILAAVAAGLHPDVPAATAAMVRVARTVKPDPARHAEYARLFRERYVPLYPALKGLFHGDAPTAGGGXXXXXXXXXXXXXXXXXXXXXXXXXGRRLAAAAGGPVGVGGIPAPPGAPPRPIISPSILAADFAALGDEVARVLAGGADWVHVDMFDG 598 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18312.5685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18312.5685.1 >prot_Ecto-sp13_S_contig18312.5685.1 ID=prot_Ecto-sp13_S_contig18312.5685.1|Name=mRNA_Ecto-sp13_S_contig18312.5685.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=236bp VCLDHFQGNRTPYTDPLSRGVLAGLTLKHGRGHMFRGLIESVCLGTELVLback to top mRNA from alignment at Ecto-sp13_S_contig18312:17..3124+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18312.5685.1 ID=mRNA_Ecto-sp13_S_contig18312.5685.1|Name=mRNA_Ecto-sp13_S_contig18312.5685.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3108bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18312:17..3124+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18312:17..3124+ >mRNA_Ecto-sp13_S_contig18312.5685.1 ID=mRNA_Ecto-sp13_S_contig18312.5685.1|Name=mRNA_Ecto-sp13_S_contig18312.5685.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=708bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18312:17..3124+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |