mRNA_Ecto-sp13_S_contig1831.5683.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1831.5683.1 vs. uniprot
Match: A0A6H5KIL5_9PHAE (ERD protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIL5_9PHAE) HSP 1 Score: 1017 bits (2629), Expect = 0.000e+0 Identity = 532/559 (95.17%), Postives = 540/559 (96.60%), Query Frame = 1
Query: 1 AIQVLTKAGGMSGTGFVTFKCLSGRACAVSTLVTNRPEVFNLKPAPEPRDIVWKNVTNHVIHVQNRNRLVNLGLALGIIFWSVVVSGIQTLSKVDTIAQVFPAVEKAAEENTFLTSLLEAYLPVTILLIIINLLYFILKWMALHLEGYKTYSEVERAVMTRYFFYQLANVFVTIGAGSIKDAIEKILEQPRELLNVLGETVPKVAVYFINLIIVKVVTGLLLELCFGGRSLKFWRILIAETFTDPGLRTKAGKTRGAYEPSEPWYGRFFADFLLIMLIVFTFQVIAPVVAVAGLLYFMFAEIIYKYQLLHCYWPLYESGGLFFQKLFRQLVVGAVAGQVTLIGYMSIRQGLRQWPFLLPLPVVVLYLSSRWRDAGRQTSNMLSLDKAVLQDVQNEINVREGAKPAWESFTPTAYVQPSLLPGDPNVEFDGEVDVGDPRDDSDVDVEGLLDLDSKGNVIAGNHGKRAQRRKAGQVLRRGSSRRRRSSALLHSAFPWLASSPRDDAGRPTASFRSNRSECGHEEERESRRPTRTMSSLFRSQSGRSITTSGRNRRPDISIA 1677
A++V+TKAGGMSGTGFVTFKCLSGRACAVSTLVTNRPEVFNLKPAPEPRDIVWKNVTNHVIHVQNRNRLVNLGLALGIIFWSVVVSGIQTLSKVDTIAQVFPAVEKAAEENTFL S LEAYLPVTILLIIINLLYFILKWMALHLEGYKTYSEVERAVM+RYFFYQLANVFVTIGAGSIKDAIEKIL QP ELLNVLGETVPKVAVYFINLIIVKVVTGLLLELCFGGRSLKFWRIL AETFTDPGLRTKAGKTRGAYEPSEPWYGRFFADFLLIMLIVFTFQVIAPVVAVAGLLYF+FAEIIYKYQLLHCYWPLYESGGLFFQKLFRQLVVGAVAGQVTLIGYMSIRQGLRQWPFLLPLP+VVLYLSSRWRDAGRQTSNMLSLDKAVLQDVQNEINVREGAKPAWESFTPTAYVQPSLLPGDP+V FDGEV VGD RDDSDVDVEGLLDLDSKGNVI NHGKRAQRRKAGQVLRRGSSRRRRSSALLHSAFPWLASSPRDDAGRP AS RSNRSE GHEEERESRRPTRT+SSLFRSQSG SI T G NR PD SIA
Sbjct: 1177 AVKVVTKAGGMSGTGFVTFKCLSGRACAVSTLVTNRPEVFNLKPAPEPRDIVWKNVTNHVIHVQNRNRLVNLGLALGIIFWSVVVSGIQTLSKVDTIAQVFPAVEKAAEENTFLASFLEAYLPVTILLIIINLLYFILKWMALHLEGYKTYSEVERAVMSRYFFYQLANVFVTIGAGSIKDAIEKILGQPTELLNVLGETVPKVAVYFINLIIVKVVTGLLLELCFGGRSLKFWRILFAETFTDPGLRTKAGKTRGAYEPSEPWYGRFFADFLLIMLIVFTFQVIAPVVAVAGLLYFIFAEIIYKYQLLHCYWPLYESGGLFFQKLFRQLVVGAVAGQVTLIGYMSIRQGLRQWPFLLPLPLVVLYLSSRWRDAGRQTSNMLSLDKAVLQDVQNEINVREGAKPAWESFTPTAYVQPSLLPGDPDVMFDGEVAVGDLRDDSDVDVEGLLDLDSKGNVIVANHGKRAQRRKAGQVLRRGSSRRRRSSALLHSAFPWLASSPRDDAGRPAASSRSNRSEYGHEEERESRRPTRTISSLFRSQSGGSINTFGSNRHPDSSIA 1735
BLAST of mRNA_Ecto-sp13_S_contig1831.5683.1 vs. uniprot
Match: D7FMV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV8_ECTSI) HSP 1 Score: 1002 bits (2591), Expect = 0.000e+0 Identity = 527/561 (93.94%), Postives = 538/561 (95.90%), Query Frame = 1
Query: 1 AIQVLTKAGGMSGTGFVTFKCLSGRACAVSTLVTNRPEVFNLKPAPEPRDIVWKNVTNHVIHVQNRNRLVNLGLALGIIFWSVVVSGIQTLSKVDTIAQVFPAVEKAAEENTFLTSLLEAYLPVTILLIIINLLYFILKWMALHLEGYKTYSEVERAVMTRYFFYQLANVFVTIGAGSIKDAIEKILEQPRELLNVLGETVPKVAVYFINLIIVKVVTGLLLELCFGGRSLKFWRILIAETFTDPGLRTKAGKTRGAYEPSEPWYGRFFADFLLIMLIVFTFQVIAPVVAVAGLLYFMFAEIIYKYQLLHCYWPLYESGGLFFQKLFRQLVVGAVAGQVTLIGYMSIRQGLRQWPFLLPLPVVVLYLSSRWRDAGRQTSNMLSLDKAVLQDVQNEINVREGAKPAWESFTPTAYVQPSLLPGDPNVEFDGEVDVGDPRDDSDVDVEGLLDLDSKGNVIAGNHGKRAQRRKAGQVLRRGSSRRRRS--SALLHSAFPWLASSPRDDAGRPTASFRSNRSECGHEEERESRRPTRTMSSLFRSQSGRSITTSGRNRRPDISIA 1677
A++VLTKAGGMSGTGFVTFKCLSGRACAVSTLVTNRPEVFNL PAPEPRDIVWKNVTNHVIHVQNRNR VNLGLALGIIFWSVVVSGIQTLSKV+TIAQVFPAVEKAAEENTFLTSLLEAYLPVTILLIIINLLYFILKWMALHLEGYKTYSEVERAVM+RYFFYQLANVFVTIGAGSIKDAIEKIL+QPRELLNVLGETVPKVAVYFINLIIVKVVTGLLLELCFGGRSLKFWRILIAETFTDPGLRTKAGKTRGAYEPSEPWYGRFFADFLLIMLIVFTFQVIAPVVAVAGLLYF+FAEIIYKYQLLHCYWPLYESGGLFF KLFRQLVVGAVAGQVTLIGYMSIRQGLRQWPFLLPLP+VVLY SSRWRDAGRQTSNMLSLDKAVLQDVQNEINVREGAKPAWESFTPTAYVQPSLLPGDP+VEFDGEVDVGDPRDDSDVDVEGLLDLDSKGNVI GNHGK AQRRKAGQVLRRGS+ SALL+SAFPWLASSPRDDAGRP AS R E G EEERESRRPTRTMSSLFRSQSG SI TSGRNRRPD+SIA
Sbjct: 1421 AVKVLTKAGGMSGTGFVTFKCLSGRACAVSTLVTNRPEVFNLTPAPEPRDIVWKNVTNHVIHVQNRNRFVNLGLALGIIFWSVVVSGIQTLSKVETIAQVFPAVEKAAEENTFLTSLLEAYLPVTILLIIINLLYFILKWMALHLEGYKTYSEVERAVMSRYFFYQLANVFVTIGAGSIKDAIEKILQQPRELLNVLGETVPKVAVYFINLIIVKVVTGLLLELCFGGRSLKFWRILIAETFTDPGLRTKAGKTRGAYEPSEPWYGRFFADFLLIMLIVFTFQVIAPVVAVAGLLYFIFAEIIYKYQLLHCYWPLYESGGLFFHKLFRQLVVGAVAGQVTLIGYMSIRQGLRQWPFLLPLPLVVLYSSSRWRDAGRQTSNMLSLDKAVLQDVQNEINVREGAKPAWESFTPTAYVQPSLLPGDPDVEFDGEVDVGDPRDDSDVDVEGLLDLDSKGNVIVGNHGKSAQRRKAGQVLRRGSTSXXXXXXSALLYSAFPWLASSPRDDAGRPAASSR----EYGREEERESRRPTRTMSSLFRSQSGGSINTSGRNRRPDVSIA 1977
BLAST of mRNA_Ecto-sp13_S_contig1831.5683.1 vs. uniprot
Match: A0A836CNV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNV2_9STRA) HSP 1 Score: 430 bits (1106), Expect = 3.260e-130 Identity = 241/530 (45.47%), Postives = 330/530 (62.26%), Query Frame = 1
Query: 1 AIQVLTKAGGMSGTGFVTFKCLSGRACAVSTLVTNRPEVFNLKPAPEPRDIVWKNVTNHVIHVQNRNRLVNLGLALGIIFWSVVVSGIQTLSKVDTIAQVFPAVEKAAEENTFLTSLLEAYLPVTILLIIINLLYFILKWMALHLEGYKTYSEVERAVMTRYFFYQLANVFVTIGAGSIKDAIEKILEQPRELLNVLGETVPKVAVYFINLIIV-----------------KVVTGLLLELCFGGRSLKFWRILIAETFTDPGLRTKAGKTRGAYEPSEPWYGRFFADFLLIMLIVFTFQVIAPVVAVAGLLYFMFAEIIYKYQLLHCYWPLYESGGLFFQKLFRQLVVGAVAGQV---------TLIGYMSIRQGLRQWPFLLPLPVVVLYLSSRWRDAGRQTSNMLSLDKAVLQDVQNEINVREGAKPAWE------------------------------------------SFTPTAYVQP----SLLPGDPNVEFDGEVDVGDPRDDSDVDVEGLLDLDSKGNVI 1374
A+++LT G MS TGFVTFK LS RA AV ++V + P V + APEPRD++W NVT H ++ R V+ + +G++ WS++V GIQ L+ ++ +FP +E A+ + F+ LL YLPV +LL+++ LYFI K +A +EGYK+ SEVERAVM RYF++QLANV+V++ +GSI DA+ ILE P L++LG+ +P VAVYF LII VV GL++ELCFGGR LKFWRIL E FTDP LRT+ +TRG +EPSEPWYGRFFADFLL++++VF +Q IAP VA+AGL+YF A I+YKYQL+HCY+P+YESGGL+F KLFRQ+++G VAG V TLIGYMSI++GL+Q PFL+P+P +++Y RW G SN+LSLDKA LQD ++E+ WE +F +AY QP +LL G +F+ + + SDVD +G L++D G+++
Sbjct: 937 AVKILT-VGSMSATGFVTFKTLSARASAVQSVVVSLPGVLEVTAAPEPRDLIWPNVTRHHTQIKYRRMFVSAIVLVGLVCWSLIVIGIQALTSPASLDAIFPGIEAYAKAHPFMGDLLSTYLPVVLLLLLLQNLYFIFKALAKRVEGYKSESEVERAVMGRYFYFQLANVYVSVTSGSILDALRDILENPSSALSLLGQALPGVAVYFTKLIIEVEARGTNLLQITDDIANMVVAGLMMELCFGGRPLKFWRILCIEMFTDPLLRTREDRTRGVFEPSEPWYGRFFADFLLVIMVVFVYQCIAPFVALAGLVYFCVAAIVYKYQLVHCYYPIYESGGLYFYKLFRQVIIGVVAGSVXXXXXXXXVTLIGYMSIQRGLKQGPFLIPIPFIIVYWGLRWTREGVAASNLLSLDKAALQDREDELAEGRHCLATWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFDQSAYQQPVLRDALLGGGREDDFNVDPEA------SDVDADGALEIDELGHLV 1459
BLAST of mRNA_Ecto-sp13_S_contig1831.5683.1 vs. uniprot
Match: A0A835ZAA7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA7_9STRA) HSP 1 Score: 256 bits (653), Expect = 2.950e-69 Identity = 162/443 (36.57%), Postives = 246/443 (55.53%), Query Frame = 1
Query: 31 MSGTGFVTFKCLSGRACAVSTLVTNRPEVFNLKPAPEPRDIVWKNVTNHVIHVQNRNRLVNLGLALGIIFWSVVVSGIQTLSKVDTIAQVFPAVEKAAEENTFLTSLLEAYLPVTILLIIINLLYFILKWMALHLEGYKTYSEVERAVMTRYFFYQLANVFVTIGA-------------GSIKDAIEKILEQPRELLNVLGETVPKVAVYFINLIIVKVVTGLLLEL--------------CFGGRSLKFWRILIAETFTD----PGLRTKAGKTRGAYEPSEPWYGRFFADFLLIMLIVFTFQVIAPVVAVAGLLYFMFAEIIYKYQLLHCYWPLYESGGLFFQKLFRQLVVGAVAGQVTLIGYMSIRQGLRQWPFLLPLPVVVLYLSSRWRDAGRQTSNMLSLDKAVLQDVQNEINVREGAKPAWESFTPTAYVQPSLLPG 1266
+S TGFVTF L+ +A A LVT+RP PAPEPRD+VWKN V R + N+ LA G I WSV ++ +Q + +D +++ PA++ + +L +L+ YLPV +LLI+I LL I +A E KT S+V+ +VM+R+F+YQLAN+++T+ A G+I +A + I++ P+E+ +LG T+P VAVYF+NL++VK ++GL +EL C GGR L W + RT+ TRGA+ P + YG + LL++++ + VI PV+ G +F A ++K+Q+L+ Y P YESGG F+ + +VG V Q+TL+GY ++R G +Q PFL+ LP+V L S +D R S LSL++A D + +GA ++ F Y P+L G
Sbjct: 588 VSSTGFVTFNTLAAKAAASQLLVTHRPRTCRTYPAPEPRDVVWKNAAVPAGQVALRGIIANVLLAFGAILWSVPITALQAWTSMDQLSKWIPALDSLNHDG-YLYTLVSGYLPVLVLLILIMLLPVIFTMIAQGYELRKTISDVQASVMSRFFYYQLANIYITVSAAXXXXXXLSLVASGTILEAFQSIVDNPKEVATILGTTLPSVAVYFVNLVLVKTLSGLPMELSRLWPLITVTWSQRCGGGR-LCAWLCCCCRCWRGRPRRQXRRTRGAYTRGAFTPPQMAYGWVYPTLLLVLVVCLVYAVITPVMMPVGAAFFAVAYAVHKFQVLYVYVPAYESGGSFWFDVHDWTLVGLVTAQITLLGYTTLRSGFKQTPFLVVLPIVTLCYRSISQDRYRAPSQRLSLERARQLDERIAATHPDGASQVFK-FDALLYSPPALKAG 1027
BLAST of mRNA_Ecto-sp13_S_contig1831.5683.1 vs. uniprot
Match: D8LGF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF9_ECTSI) HSP 1 Score: 241 bits (615), Expect = 2.030e-64 Identity = 147/408 (36.03%), Postives = 238/408 (58.33%), Query Frame = 1
Query: 4 IQVLTKAGGMSGTGFVTFKCLSGRACAVSTLVTNRPEVFNLKPAPEPRDIVWKNVTNHVIHVQN--RNRLVNLGLALGIIFWSVVVSGIQTLSKVDTIAQVFPAVEKAAEENTFLTSLLEAYLPVTILLIIINLLYFILKWMALHLEGYKTYSEVERAVMTRYFFYQLANVFVTIGAGSIKDAIEKILEQPRELLNVLGETVPKVAVYFINLIIVKVVTGLLLELCFGGRSLKFWRILIAETFTDPGLRTKAGKTRGAYEPSEPWYGRFFADFLLIMLIVFTFQVIAPVVAVAGLLYFMFAEIIYKYQLLHCYWPLYESGGLFFQKLFRQLVVGAVAGQVTLIGYMSIRQGLRQWPFLLPLPVVVLYLSSRWRDAGRQTSNMLSLDKAVLQDVQNEINVREGAKPAWE 1221
+ LT MS TGFVTF+ ++ A + L+ RP+ + +PAP+PRD+VWKN+ V QN R + +A G IFWS V IQ + + ++FP + + ++FL ++ YLPV +LL LL F+ + +A E K++SEV+++++TRYF YQ+AN++VT+ +GSI A+++IL+ P +LN+LGET P VAVYF+++I+VK+ GL EL G + R+L ++ T+ T+ G + P+E YG + LL++++ F + VI+P + AG L+F A ++YKYQ L+ Y P YESGG+F+ ++ ++++G Q+TL GY+ +R G Q +LPLPV + + R + +S++ A D + + K A E
Sbjct: 524 VLYLTLGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCEPAPDPRDVVWKNIA--VPQPQNDLRQNVAAWLVAAGAIFWSFPVLLIQLWASYSELEKIFPVLADL-DPDSFLYYVIAGYLPVVLLLXXXXLLPFLFQALAYRYERRKSHSEVQQSILTRYFTYQVANIYVTVASGSIISALQEILDDPASVLNILGETFPAVAVYFLDVIVVKIFVGLPFELLRGWPLI---RVLWSQRCTNRDFATEREIRTGPFGPAELLYGWVYPTLLLVLVVCFVYAVISPFIMPAGALFFALAYLVYKYQALYVYVPKYESGGVFWFSVYPRVLIGLALAQLTLAGYVYVRAGFTQASLILPLPVFIYWYGYRSFKRYLGPAESISMETAARIDRRGASAMAAAVKAAAE 925
BLAST of mRNA_Ecto-sp13_S_contig1831.5683.1 vs. uniprot
Match: A0A8J9X7E6_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X7E6_PHATR) HSP 1 Score: 226 bits (577), Expect = 1.890e-62 Identity = 153/428 (35.75%), Postives = 240/428 (56.07%), Query Frame = 1
Query: 31 MSGTGFVTFKCLSGRACAVSTLVTNRPEVFNLKPAPEPRDIVWKNVTNHVIHVQNRNRL-----VNLGLALGIIFWSVVVSGIQTLSKVDTIAQVFPAVE--KAAEENTFLTSLLEAYLPVTILLIIINLLYFILKWMALHLEGYKTYSEVERAVMTRYFFYQLANVFVTIGAGSIKDAIEKILEQPRELLNVLGETVPKVAVYFINLIIVKVVTGL-LLELCFGGRSLKFWRILIAETFTDPGLRTKAGKTRGAYEPSEPWYGRFFADFLLIMLIVFTFQVIAPVVAVAGLLYFMFAEIIYKYQLLHCYWPLYESGGLFFQKLFRQLVVGAVAGQVTLIGYMSIRQGLRQWPFLLPLPVVVLYLSSRWRDAGRQTSNMLSLD-----------KAVLQDVQNEINVREGAKPAWESFTPTAYVQPSL 1257
MS TG+VTF LS CA S +T + V ++ APEPRDI+WKN H+ R++L N L LG+I WS ++ IQ +K + +AQ+ P +E TF T+ + YLPV LL +I +L I +++A+ E KTYS+V+ ++++RYF+YQLAN++V++ AGSI ++ IL+ P +L +LG+++P + YF L++ K++ GL ++ L FG S R+L +T ++ T+ + Y YG F LL+++IVFT+ +I PV+ GLLYF+ A ++YK Q+L+ Y P+YESGG F + ++ + G V GQ+T IGY+ R Q L PLP+ ++ + +R S LSL+ KA ++ + N+ G + F +Y QP L
Sbjct: 57 MSSTGYVTFLDLSSTTCAASAPLTVKANVLDVSVAPEPRDIIWKNA-----HISKRSQLRRGNFTNFFLFLGVILWSFPLAAIQAFAKAEFLAQI-PGMEWILTFHGGTF-TNFMNGYLPVVALLCLILILPLIFEYVAVSYEHRKTYSDVQSSMLSRYFYYQLANIYVSVTAGSILKSLSDILDHPSNILQLLGDSLPTMVGYFDALLVTKIMAGLPMIFLRFGALS----RMLFLKTLSNEKKMTQR-ELDAVYRLENVQYGWEFPTQLLVVVIVFTYAIICPVILPFGLLYFLGALLVYKKQVLYVYSPVYESGGAMFPVVVQRTLFGLVCGQMTFIGYVVTRGCYYQPICLFPLPIGTIWAMNFFRQNYADPSTRLSLERARECDRLSSSKAATEEDGLDSNIDRGVELRRTKFDRKSYRQPVL 472
BLAST of mRNA_Ecto-sp13_S_contig1831.5683.1 vs. uniprot
Match: B8C4F1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4F1_THAPS) HSP 1 Score: 229 bits (584), Expect = 3.370e-61 Identity = 145/414 (35.02%), Postives = 230/414 (55.56%), Query Frame = 1
Query: 31 MSGTGFVTFKCLSGRACAVSTLVTNRPEVFNLKPAPEPRDIVWKNVTNHVIHVQNRNRLVNLGLALGIIFWSVVVSGIQTLSKVDTIAQVFPAVEKAAEENTFLTSLLEAYLPVTILLIIINLLYFILKWMALHLEGYKTYSEVERAVMTRYFFYQLANVFVTIGAGSIKDAIEKILEQPRELLNVLGETVPKVAVYFINLIIVKVVTGLLLELCFGGRSLK--FWRILIAETFTDPGLRTKAGKTRGAYEP---SEPWYGRFFADFLLIMLIVFTFQVIAPVVAVAGLLYFMFAEIIYKYQLLHCYWPLYESGGLFFQKLFRQLVVGAVAGQVTLIGYMSIRQGLRQWPFLLPLPVVVLYLSSRWRDAGRQTSNMLSLDKAVLQDVQNEINVREGAKPAWESFTPTAYVQPSL 1257
MS TGF+TF+ L CAV T + ++P+V + APEPRDI+W+N ++ + R N+ L LG I WS+ V+ IQ L+ D IA V + + + YLPV +LL II +L F+ +ALH E KT S+V+++++ RYF+YQLAN+++T+ AGSI +++ +I E P + +LG+++P V YF I+ KV GL L L G + F ++L E + + Y P S+ WYG + + LL+++I FT+ I+P++ G YF+ A I+YK Q+L Y P YESGG F + ++G V GQ+TLIGY +R+G Q + PLP++ + + +++ +S+++AV D +++ + SF+ Y QP L
Sbjct: 381 MSSTGFITFRDLQTVTCAVKTPLFDKPDVLVVSMAPEPRDIIWENCHVNLGWSKGREWTANMLLGLGAILWSIPVAIIQALATADQIATVPGMAWISTLNGGAVAGFVNGYLPVVLLLTIIMVLPFLFYVVALHYEDRKTQSDVQKSIIGRYFYYQLANIYITVTAGSILESLGEIAEHPSNVFAILGKSLPNVVGYFATFIMTKVFAGLPLILLRVGPLFRMIFIKLLFREKYLTQSEMDEV------YHPEKFSQLWYGWEYPNLLLVIVICFTYSCISPIILPVGAAYFLGAWIVYKNQILTVYRPSYESGGTMFPMACHRTLIGLVCGQLTLIGYCVMREGFYQALLMFPLPLISIKMMDVFKNLYVVPGTCISVERAVELDARSDAQL---------SFSADVYRQPVL 779
BLAST of mRNA_Ecto-sp13_S_contig1831.5683.1 vs. uniprot
Match: K0SU52_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SU52_THAOC) HSP 1 Score: 230 bits (586), Expect = 1.210e-60 Identity = 150/414 (36.23%), Postives = 237/414 (57.25%), Query Frame = 1
Query: 31 MSGTGFVTFKCLSGRACAVSTLVTNRPEVFNLKPAPEPRDIVWKNVTNHVIHVQNRNR--LVNLGLALGIIFWSVVVSGIQTLSKVDTIAQVFPAVEKAAEENTFLTSLLEAYLPVTILLIIINLLYFILKWMALHLEGYKTYSEVERAVMTRYFFYQLANVFVTIGAGSIKDAIEKILEQPRELLNVLGETVPKVAVYFINLIIVKVVTGL---LLELCFGGRSLKFWRILIAETFTDPGLRTKAGKTRGAYEPSEPWYGRFFADFLLIMLIVFTFQVIAPVVAVAGLLYFMFAEIIYKYQLLHCYWPLYESGGLFFQKLFRQLVVGAVAGQVTLIGYMSIRQGLRQWPFLLPLPVVVLYLSSRWRDAGRQTSNMLSLDKAVLQDVQNEINVREGAKPAWESFTPTAYVQPSL 1257
MS TGF++FK LS ACAV T + ++P+V ++ APEPRD++W+N HV +R R N LA+G I WS+ V+ IQ L+ VDT+A V + S + YLPV +LL+II +L I +AL+ E KT S+V+R+V+ RYF+YQLAN+F+T+ AGSI +++ +I+E P +L +LG+T+P V YF+ ++ K++ GL LL L R++ F +++ E + +++ + + + + WYG + + LL++ I F + I+PV+ G +F A +IYK Q+L + P YESGGL F + ++G + GQ+TL GY IR G Q + PLP++ + + ++ +S+++AV D N + A SF Y QP L
Sbjct: 530 MSSTGFISFKDLSTLACAVKTPLFHKPDVLVVRMAPEPRDLIWENA--HVNQAWSRGREFTANTLLAVGAILWSIPVASIQALATVDTLASVTGMDWIQTLHGGRVASFVNGYLPVVLLLVIIMVLPHIFYAVALYYEDRKTQSDVQRSVIGRYFYYQLANIFITVTAGSILESLNEIVEHPTNILAILGKTLPNVVGYFVAFVMTKMLCGLPIVLLRLPPLMRTV-FKKVVFREKYL---TQSELDELQYPIKFRQLWYGWEYPNLLLVITICFVYSCISPVILPVGSAFFGLAWLIYKNQILTVFDPGYESGGLMFPMACHRTLIGLICGQLTLAGYSIIRGGFYQALVIFPLPIITIKMLGVFKTLYIDPGECISVERAVELDAHNPM--------AASSFDADVYRQPVL 929
BLAST of mRNA_Ecto-sp13_S_contig1831.5683.1 vs. uniprot
Match: B7FTE9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FTE9_PHATC) HSP 1 Score: 226 bits (577), Expect = 2.050e-59 Identity = 153/428 (35.75%), Postives = 240/428 (56.07%), Query Frame = 1
Query: 31 MSGTGFVTFKCLSGRACAVSTLVTNRPEVFNLKPAPEPRDIVWKNVTNHVIHVQNRNRL-----VNLGLALGIIFWSVVVSGIQTLSKVDTIAQVFPAVE--KAAEENTFLTSLLEAYLPVTILLIIINLLYFILKWMALHLEGYKTYSEVERAVMTRYFFYQLANVFVTIGAGSIKDAIEKILEQPRELLNVLGETVPKVAVYFINLIIVKVVTGL-LLELCFGGRSLKFWRILIAETFTDPGLRTKAGKTRGAYEPSEPWYGRFFADFLLIMLIVFTFQVIAPVVAVAGLLYFMFAEIIYKYQLLHCYWPLYESGGLFFQKLFRQLVVGAVAGQVTLIGYMSIRQGLRQWPFLLPLPVVVLYLSSRWRDAGRQTSNMLSLD-----------KAVLQDVQNEINVREGAKPAWESFTPTAYVQPSL 1257
MS TG+VTF LS CA S +T + V ++ APEPRDI+WKN H+ R++L N L LG+I WS ++ IQ +K + +AQ+ P +E TF T+ + YLPV LL +I +L I +++A+ E KTYS+V+ ++++RYF+YQLAN++V++ AGSI ++ IL+ P +L +LG+++P + YF L++ K++ GL ++ L FG S R+L +T ++ T+ + Y YG F LL+++IVFT+ +I PV+ GLLYF+ A ++YK Q+L+ Y P+YESGG F + ++ + G V GQ+T IGY+ R Q L PLP+ ++ + +R S LSL+ KA ++ + N+ G + F +Y QP L
Sbjct: 547 MSSTGYVTFLDLSSTTCAASAPLTVKANVLDVSVAPEPRDIIWKNA-----HISKRSQLRRGNFTNFFLFLGVILWSFPLAAIQAFAKAEFLAQI-PGMEWILTFHGGTF-TNFMNGYLPVVALLCLILILPLIFEYVAVSYEHRKTYSDVQSSMLSRYFYYQLANIYVSVTAGSILKSLSDILDHPSNILQLLGDSLPTMVGYFDALLVTKIMAGLPMIFLRFGALS----RMLFLKTLSNEKKMTQR-ELDAVYRLENVQYGWEFPTQLLVVVIVFTYAIICPVILPFGLLYFLGALLVYKKQVLYVYSPVYESGGAMFPVVVQRTLFGLVCGQMTFIGYVVTRGCYYQPICLFPLPIGTIWAMNFFRQNYADPSTRLSLERARECDRLSSSKAATEEDGLDSNIDRGVELRRTKFDRKSYRQPVL 962
BLAST of mRNA_Ecto-sp13_S_contig1831.5683.1 vs. uniprot
Match: A0A7S4VLS2_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VLS2_9STRA) HSP 1 Score: 226 bits (577), Expect = 3.490e-59 Identity = 148/414 (35.75%), Postives = 226/414 (54.59%), Query Frame = 1
Query: 31 MSGTGFVTFKCLSGRACAVSTLVTNRPEVFNLKPAPEPRDIVWKNVTNHVIHVQNRNRLVNLGLALGIIFWSVVVSGIQTLSKVDTIAQVFPAVEKAAE-ENTFLTSLLEAYLPVTILLIIINLLYFILKWMALHLEGYKTYSEVERAVMTRYFFYQLANVFVTIGAGSIKDAIEKILEQPRELLNVLGETVPKVAVYFINLIIVKVVTGL-LLELCFGGRSLKFWRILIAETFTDPGLRTKAGKTRGAYEPSEPWYGRFFADFLLIMLIVFTFQVIAPVVAVAGLLYFMFAEIIYKYQLLHCYWPLYESGGLFFQKLFRQLVVGAVAGQVTLIGYMSIRQGLRQWPFLLPLPVVVLYLSSRWRDAGRQTSNMLSLDKAVLQDVQNEINVREGAKPAWESFTPTAYVQPSLLPG 1266
MS TGFVTF L C +++ P V AP+PRDI W+N + R N+ L +G I WSV V+ IQ + D++A + P E + S + YLPV LL II +L I +W+A+H E KTYS+VE++++TRYF+YQLAN+++T+ AGSI ++ IL+ P + +LG+++P V YF+ L++ K++ GL L+ L FG RIL + F T++ + + + +YG + LL++ I FT+ I+P++ G +YF+ A ++YK Q+L Y P YESGG F + + G + GQVTLIGY ++QG Q FLLPL V + + + ++ + LS++KA+ D + A +SF Y QP L G
Sbjct: 687 MSSTGFVTFTDLQTVTCGAKAPLSDDPRVLEANIAPDPRDIKWENAHINRSWSAGREWTANVALGVGAILWSVPVAAIQAWATADSLASI-PGFEWIMSFDGGEFASFVNGYLPVVALLCIILILPIIFEWIAVHYENRKTYSDVEKSILTRYFYYQLANIYITVTAGSIWTSLSDILDHPGNVFAILGKSLPTVVGYFVALLLTKILAGLPLVMLRFGALG----RILFLKIFFKTKYLTQS-ELDEVNKKNVLYYGWEYPTQLLVITICFTYACISPIILPVGAVYFLGALLVYKKQILVVYCPTYESGGTMFPSACHRTLTGLLCGQVTLIGYSILKQGFYQPLFLLPLLVFTVGMMNVYKKLYAEPGRQLSIEKALSLDKHST---------AVKSFRKDCYRQPVLAEG 1085 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1831.5683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1831.5683.1 >prot_Ecto-sp13_S_contig1831.5683.1 ID=prot_Ecto-sp13_S_contig1831.5683.1|Name=mRNA_Ecto-sp13_S_contig1831.5683.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=550bp MSGTGFVTFKCLSGRACAVSTLVTNRPEVFNLKPAPEPRDIVWKNVTNHVback to top mRNA from alignment at Ecto-sp13_S_contig1831:6067..15500- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1831.5683.1 ID=mRNA_Ecto-sp13_S_contig1831.5683.1|Name=mRNA_Ecto-sp13_S_contig1831.5683.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9434bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1831:6067..15500- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1831:6067..15500- >mRNA_Ecto-sp13_S_contig1831.5683.1 ID=mRNA_Ecto-sp13_S_contig1831.5683.1|Name=mRNA_Ecto-sp13_S_contig1831.5683.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1650bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1831:6067..15500- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |