mRNA_Ecto-sp13_S_contig18302.5680.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18302.5680.1
Unique NamemRNA_Ecto-sp13_S_contig18302.5680.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: A0A6H5JD09_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD09_9PHAE)

HSP 1 Score: 741 bits (1913), Expect = 7.390e-256
Identity = 474/589 (80.48%), Postives = 482/589 (81.83%), Query Frame = 1
Query:  394 MSTSDAAAAAGDETGGDAKPEGKDANINATTEESGEGDEQQVGGVCPPTAVDVSAANEALQGRIVDKDHKSKDAAAEAGRQPSATFADAKGVDNCCSSPMSTSPPPSHRIGAPLPSPSLSSPRRRNEAASPVAPTXXXXXXXX----KLLKQHQEQRASGLMPANKRRLRIYPTGRNRNSKWVTREIAALDFLTGLKMRNEAAILAQGTSGGXXXXDFGTSADDESS--PSLLDSGSGVGASGDSSXXXXXXXXXXXXXXXXXXXXXXXHGEAAAEVARGAYPAAEGRAGATXXXXXXXXXKGIEGRSSTPTGGGVTFAENETSNNSDDSDSDNGWLDQPLPSTGRGGASSGHVSAHRLRVATTGRGRTGASAGIGGGGARVSGAGFRRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVVS 2142
            MST+DAAAAAGDETGG A PEGK+AN NAT EESG              AV VSAA EA Q RIVD DHKSKDAAAEAGR PSATFADAK V +  SSPM TS PPSHRIGAPLPSPSLS PRRRNEAASP+  T XXXXXXX    KLLKQHQEQRASGLMPANKRRLRIYPTGRNRNSKWVTREIAALDFLTGLKMRNEAAILAQGTSG XXXX             P LLDSGSGVGA GD S    XXXXXXXXXXXXXXXXXXXHGEAAAEVARGAYPAAE RAGAT         K IEGRSSTPT GGVTFA NET NNSDDSDSDNGWLDQPLPSTGRGGASSGHVSAHRLRVATTGRG TG S GIGGGGARVSGAGFRRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIP+RDWRGFSYAHLLPAST APGG+S                XX  VESE EGT+GG         XXXXXX  SDKMPY+AGFLDDPALKVGRHRHMTKGDRNTGPVVS
Sbjct:    1 MSTADAAAAAGDETGGHAMPEGKNANTNATMEESGXXXXXXXXXXXXXXAVYVSAAEEASQERIVD-DHKSKDAAAEAGRHPSATFADAKSVGDSSSSPMLTSLPPSHRIGAPLPSPSLSLPRRRNEAASPLGATAXXXXXXXXXXXKLLKQHQEQRASGLMPANKRRLRIYPTGRNRNSKWVTREIAALDFLTGLKMRNEAAILAQGTSGXXXXXXXXXXXXXXXXXXPPLLDSGSGVGALGDRSRRGGXXXXXXXXXXXXXXXXXXXHGEAAAEVARGAYPAAESRAGATGAGGEAKEAKDIEGRSSTPTAGGVTFAGNETKNNSDDSDSDNGWLDQPLPSTGRGGASSGHVSAHRLRVATTGRGGTGTSDGIGGGGARVSGAGFRRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPRRDWRGFSYAHLLPASTCAPGGDSSVGSTAGGAIVAILGGXXG-VESEREGTVGGGSVSGAGGIXXXXXXAGSDKMPYKAGFLDDPALKVGRHRHMTKGDRNTGPVVS 587          
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: D7G4Y1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y1_ECTSI)

HSP 1 Score: 470 bits (1209), Expect = 7.970e-157
Identity = 330/440 (75.00%), Postives = 335/440 (76.14%), Query Frame = 1
Query:  358 EVHIAE-GPTSITMSTSDAAAAAGDETGGDAKPEGKDANINATTEESGEGDEQQVGGVCPPTAVDVSAANEALQGRIVDKDHKSKDAAAEAGRQPSATFADAKGVDNCCSSPMSTSPPPSHRIGAPLPSPSLSSPRRRNEAASPVAPTXXXXXXXXKLL----KQHQEQRASGLMPANKRRLRIYPTGRNRNSKWVTREIAALDFLTGLKMRNEAAILAQGTSGGXXXXDFGTSADDESSPSLLDSGSGVGASGDSSXXXXXXXXXXXXXXXXXXXXXXXHGEAAAEVARGAYPAAEGRAGATXXXXXXXXXKGIEGRSSTPTGGGVTFAENETSNNSDDSDSDNGWLDQPLPSTGRGGASSGHVSAHRLRVATTGRGRTGASAGIGGGGARVSGAGFRRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQ 1662
            EVHIA  GPTS TMST DAAA+AGDET G+AKPE K+ANINATTE                                        DAAAEAGRQPSATF+DAK V N  SSPM  SPPPSH IGAPLPS SLSSP             XXXXXXXX       KQHQEQRA GLMPANKRRLRIYPTGRNRNSKWVTREIAALDFLTGLKMRNEAAILAQGTSG XXXXDFG SADDESSPSLLDSGSGVG S DS XXXXXXXXXXXXXXXXXXXXXXX   AAAEVARGAYPAAEGR G T         K IEGR STPTGGGVTFA+NE  NNSDDSDSDNGWLDQPLPSTGRGGASSGHVSA RLR ATTG G  GASAGIGG  ARVSGAGFRRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQ
Sbjct:    3 EVHIAAAGPTSKTMSTVDAAASAGDETRGEAKPEDKNANINATTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAAEAGRQPSATFSDAKSVGNSSSSPMLASPPPSHCIGAPLPSLSLSSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQHQEQRAPGLMPANKRRLRIYPTGRNRNSKWVTREIAALDFLTGLKMRNEAAILAQGTSGXXXXXDFGVSADDESSPSLLDSGSGVGTSRDSXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEVARGAYPAAEGRGGTTGAGGEAKEDKDIEGRRSTPTGGGVTFADNENKNNSDDSDSDNGWLDQPLPSTGRGGASSGHVSARRLRGATTGHGGMGASAGIGGXXARVSGAGFRRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQ 442          
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: D7G4Y2_ECTSI (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y2_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 4.930e-51
Identity = 129/142 (90.85%), Postives = 132/142 (92.96%), Query Frame = 1
Query: 1717 MVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVVS 2142
            MVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGG+S        XXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXX  S+KMPY+AGFLDDPALKVGRHRHMTKGDRNTGPVVS
Sbjct:    1 MVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGDSSVGSTAGGXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXAGSEKMPYKAGFLDDPALKVGRHRHMTKGDRNTGPVVS 142          
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: A0A835YPH7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPH7_9STRA)

HSP 1 Score: 147 bits (371), Expect = 6.190e-33
Identity = 105/211 (49.76%), Postives = 126/211 (59.72%), Query Frame = 1
Query: 1537 RRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIG----------GXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVV 2139
            RRL G EA HVR+P  FRH +  LPG  AA VRQWE+ L  Q  LL+GRLFFS +KGYPL V SVI Y+P+EE+ +R   K +DERGAEAF++P+RDWRGFSY +LL A+   P                        +  EG   +           G XXXXXXXXXXXXXXXX        G LDDPAL VGRH+ +  GD +TGPV+
Sbjct:  424 RRLGGPEATHVRVPRAFRHGLLQLPGQDAAEVRQWERSLANQG-LLDGRLFFSGTKGYPLAVCSVIRYEPKEEELRRRWHKLVDERGAEAFRVPRRDWRGFSYGYLLSAAR--PEKFKEPNHMRSRVQEQEAPQHQTLLHLEGSAHVPDDEPRRPGRPGTXXXXXXXXXXXXXXXXXXXXXXXXGVLDDPALSVGRHKQLLTGDEHTGPVI 631          
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: A0A4D9D598_9STRA (Cyclin N-terminal domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D598_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.010e-19
Identity = 71/199 (35.68%), Postives = 90/199 (45.23%), Query Frame = 1
Query: 1543 LRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVV 2139
            L G +A  V +P + RH  Q    HSAAVVRQWE+ + +   +L+GRLF S  +GYPL+V+SV+ YKP  E  KR R ++++ERG EAF  P  DWRG  Y  LL A       E                              GG                 +    Y+   LDDPAL  GR R +  G    GPVV
Sbjct:   39 LNGLDAFVVSVPESIRHKYQ----HSAAVVRQWERRV-KNAGILDGRLFISSRRGYPLVVASVVEYKPGSESEKRWRARQVNERGGEAFHRPVPDWRGVRYGALLHAERATCSAERDARDGGYLM------------------ACGGKDGVRAGAAPASHSPFGASGSSYDPASLDDPALSHGRTRQLNVGGPGLGPVV 214          
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: A0A7S2RWQ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWQ1_9STRA)

HSP 1 Score: 102 bits (253), Expect = 7.010e-19
Identity = 65/201 (32.34%), Postives = 86/201 (42.79%), Query Frame = 1
Query: 1537 RRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVV 2139
            RRL G  A  V +P   RH +  + G   A +RQWE        +   RLFFS ++ YP+ V S + Y P EE+AKR  QK +D++  +AFQ+P RDWRG SYAHLL       G E+                             G                       Y+ G LDDP +  G+  H+ +GD   GP V
Sbjct:  183 RRLDGISAPSVTVPRKIRHRLARVGG---AALRQWELETIHSPTMEHSRLFFSGNRAYPVAVGSFLRYDPSEEEAKRRLQKLVDQKAVDAFQVPHRDWRGTSYAHLLVPRPFLVGAETWT---------------------------GAENPEDNPLVADQVHQEHDQDWSYQPGVLDDPDMVQGKFSHVIRGDERLGPFV 353          
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: W2M7Q4_PHYPR (Cyclin N-terminal domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2M7Q4_PHYPR)

HSP 1 Score: 99.8 bits (247), Expect = 3.120e-18
Identity = 68/202 (33.66%), Postives = 89/202 (44.06%), Query Frame = 1
Query: 1537 RRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVVS 2142
            RRL G EA  V +P  FRH        ++AVVR+WE G+T Q  LL+ RLFFS   GYPL  S++I+Y   E  A+R R   I     E       DWRG SY  LL A+  A                                                      +++P+ A FLDDP  + GRHRH+ +GD++ GP+VS
Sbjct:  101 RRLPGMEATIVHVPPLFRHRFTTKFPAASAVVRRWE-GVTAQQGLLDSRLFFSRGCGYPLATSTIINYNGNETTARRRRFASISGLALERPSPTHYDWRGTSYFRLLHATWSA------------------------------------------CDPDRDREDAHPERVPFSANFLDDPEFRQGRHRHVVRGDKSLGPIVS 259          
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: A0A3M6V9W7_9STRA (Cyclin N-terminal domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V9W7_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 7.210e-18
Identity = 67/202 (33.17%), Postives = 93/202 (46.04%), Query Frame = 1
Query: 1537 RRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVVS 2142
            +RL G EA  V +P+ FR+        ++AVVR+WE G+T Q  LL+ RLFFS   GYPL  S++I+Y   E  A+R R   +     E       DWRG SY  LL A+  A                          + + E                       +++PY A FLDDP  + GRHRH+ +GD++ GP+VS
Sbjct:   94 KRLPGMEATVVHVPSLFRYRFTTKFPAASAVVRRWE-GVTAQQGLLDARLFFSRGCGYPLATSTIINYNGNETTARRIRFASMSALALERPSSTNYDWRGTSYFRLLHATWSA-----------------------CDADRDREDA-------------------HPERVPYSANFLDDPEFRQGRHRHVVRGDKSLGPIVS 252          
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: A0A6A3ULW9_9STRA (Cyclin N-terminal domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ULW9_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 7.380e-17
Identity = 65/202 (32.18%), Postives = 88/202 (43.56%), Query Frame = 1
Query: 1537 RRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVVS 2142
            RRL G  A  V +P  FR+        ++AVVR+WE G+T Q  LL+ RLFFS   GYPL  S++I+Y   E  A+R R   +     E       DWRG SY  LL A+  A                                                      +++PY A FLDDP  + GRHRH+ +GD++ GP++S
Sbjct:  105 RRLPGMAATVVHVPPLFRYRFTTKFPAASAVVRRWE-GVTAQQGLLDARLFFSRGCGYPLATSTIINYNGNETTARRRRFASLSGLALERPSPSHYDWRGTSYFRLLHATWSA------------------------------------------CDPDRDREDAHPERVPYSANFLDDPEFRQGRHRHVVRGDKSLGPIIS 263          
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: H3GGL8_PHYRM (Cyclin N-terminal domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GGL8_PHYRM)

HSP 1 Score: 89.7 bits (221), Expect = 4.840e-15
Identity = 62/202 (30.69%), Postives = 89/202 (44.06%), Query Frame = 1
Query: 1537 RRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVVS 2142
            RRL G  A  + +P  FR+         +AVVR+WE G+T Q  L + RLFFS   GYPL   ++++Y   E  A+R R   +     E       DWRG SY  LL A+  +                          +S+ +                       +++PY A FLDDP  + GRHRH+ +GD++ GP+VS
Sbjct:   94 RRLPGMAATLIHVPPLFRYRFTTKFPAGSAVVRRWE-GVTAQQGLQDARLFFSRGCGYPLATFTILNYNGNETTARRRRFASLSSLALERPSPTHYDWRGTSYFRLLHATWSS-------------------------CDSDRD-----------------QEDAHPERVPYSANFLDDPEFRQGRHRHVVRGDKSLGPIVS 252          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JD09_9PHAE7.390e-25680.48Cyclin N-terminal domain-containing protein n=1 Ta... [more]
D7G4Y1_ECTSI7.970e-15775.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4Y2_ECTSI4.930e-5190.85Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A835YPH7_9STRA6.190e-3349.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D598_9STRA1.010e-1935.68Cyclin N-terminal domain-containing protein n=2 Ta... [more]
A0A7S2RWQ1_9STRA7.010e-1932.34Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W2M7Q4_PHYPR3.120e-1833.66Cyclin N-terminal domain-containing protein n=10 T... [more]
A0A3M6V9W7_9STRA7.210e-1833.17Cyclin N-terminal domain-containing protein n=2 Ta... [more]
A0A6A3ULW9_9STRA7.380e-1732.18Cyclin N-terminal domain-containing protein n=3 Ta... [more]
H3GGL8_PHYRM4.840e-1530.69Cyclin N-terminal domain-containing protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18302contigEcto-sp13_S_contig18302:103..3017 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score196.8
Seed ortholog evalue2.8e-47
Seed eggNOG ortholog2880.D7G4Y2
Preferred nameCABLES1
Model size2142
KEGG koko:K09528
Hectar predicted targeting categoryother localisation
GOsGO:0000082,GO:0000278,GO:0002009,GO:0002165,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0007049,GO:0007275,GO:0007399,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008150,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0022402,GO:0030424,GO:0030426,GO:0030427,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0033267,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044719,GO:0044770,GO:0044772,GO:0044843,GO:0048513,GO:0048563,GO:0048569,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0050789,GO:0050794,GO:0051726,GO:0060429,GO:0060562,GO:0065007,GO:0065008,GO:0070013,GO:0090066,GO:0097458,GO:0120025,GO:0120038,GO:0150034,GO:1903047
Exons3
EggNOG free text desc.regulation of cell cycle
EggNOG OGsKOG4164@1,KOG4164@2759
Cds size1749
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041,ko03110
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462943.0399761-UTR-Ecto-sp13_S_contig18302:102..4951681462943.0399761-UTR-Ecto-sp13_S_contig18302:102..495Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig18302 103..495 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462943.0520816-CDS-Ecto-sp13_S_contig18302:495..17641681462943.0520816-CDS-Ecto-sp13_S_contig18302:495..1764Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18302 496..1764 +
1681462943.0607731-CDS-Ecto-sp13_S_contig18302:2377..25381681462943.0607731-CDS-Ecto-sp13_S_contig18302:2377..2538Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18302 2378..2538 +
1681462943.0773253-CDS-Ecto-sp13_S_contig18302:2698..30171681462943.0773253-CDS-Ecto-sp13_S_contig18302:2698..3017Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18302 2699..3017 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18302.5680.1prot_Ecto-sp13_S_contig18302.5680.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18302 496..3017 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18302.5680.1

>prot_Ecto-sp13_S_contig18302.5680.1 ID=prot_Ecto-sp13_S_contig18302.5680.1|Name=mRNA_Ecto-sp13_S_contig18302.5680.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=583bp
MSTSDAAAAAGDETGGDAKPEGKDANINATTEESGEGDEQQVGGVCPPTA
VDVSAANEALQGRIVDKDHKSKDAAAEAGRQPSATFADAKGVDNCCSSPM
STSPPPSHRIGAPLPSPSLSSPRRRNEAASPVAPTASAAAAAAKLLKQHQ
EQRASGLMPANKRRLRIYPTGRNRNSKWVTREIAALDFLTGLKMRNEAAI
LAQGTSGGGGGGDFGTSADDESSPSLLDSGSGVGASGDSSHRGGGGWGWD
MQKEKNSDDDNNNHGEAAAEVARGAYPAAEGRAGATGAGGEAKEAKGIEG
RSSTPTGGGVTFAENETSNNSDDSDSDNGWLDQPLPSTGRGGASSGHVSA
HRLRVATTGRGRTGASAGIGGGGARVSGAGFRRLRGREAAHVRLPANFRH
SMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYK
PQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESS
AGGTAGGATAAILGGGGGGVESEGEGTIGGGSVGGGGGIGDGGDGTGSDK
MPYEAGFLDDPALKVGRHRHMTKGDRNTGPVVS
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mRNA from alignment at Ecto-sp13_S_contig18302:103..3017+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18302.5680.1 ID=mRNA_Ecto-sp13_S_contig18302.5680.1|Name=mRNA_Ecto-sp13_S_contig18302.5680.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2915bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18302:103..3017+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGGCGCTCAAAGCGGCCCTAGTTGAGCTCCGTCTGTCTGTCTTCTGCTCT GTACCCGCATTGGACGCCATCCTTCCTGTACGAGGTGACATCGTTCAGAG TTTCGACGTGCTGAAAATGCAAGGGAGCGCACGAGGGAGAGGCTACCGTA ACAGCTTTTGCGCAGCAGTAGCAGTCTACCCAGGTTTTCTTGCGTAAGCA AACATACGCTGGGGCAGAGCATTGCAATCGGCTACTACACGCCGGGGGTT GTCCTCTCGTACTACATGTAATCAACTGCGTTGAGAGCGCCTACTGCCGG CTTTGCTTGCATCAAGTCCTCGAGCGGCGCTCTTCCTCGTGTGTGCCGTT GACATAGGAGGTACACATCGCGGAAGGACCCACCTCTATCACGATGAGCA CGTCAGATGCTGCAGCTGCTGCTGGCGACGAGACAGGAGGTGACGCAAAG CCAGAGGGCAAGGACGCCAACATCAACGCGACAACGGAGGAATCAGGCGA AGGAGATGAACAACAAGTGGGTGGAGTGTGCCCGCCAACCGCAGTTGATG TCTCCGCCGCTAATGAAGCTTTACAGGGGCGCATCGTCGACAAAGACCAC AAGAGCAAAGATGCCGCCGCCGAGGCCGGTCGCCAGCCAAGCGCCACGTT CGCGGACGCAAAGGGCGTGGACAACTGCTGTAGCAGTCCTATGTCGACAT CGCCGCCGCCGTCGCACCGCATAGGAGCACCACTGCCATCACCATCACTA TCATCACCCCGCCGCAGAAATGAAGCGGCGAGCCCGGTTGCGCCGACTGC GTCCGCCGCAGCCGCAGCGGCCAAGCTATTAAAGCAACACCAAGAGCAGC GGGCGTCGGGACTGATGCCGGCGAACAAACGCCGGCTCCGCATCTACCCG ACGGGGAGAAACCGCAACAGTAAGTGGGTCACGCGGGAGATTGCCGCTCT CGACTTTCTCACGGGTCTTAAGATGCGCAACGAGGCCGCGATCCTTGCTC AAGGGACAAGCGGCGGCGGCGGCGGCGGCGACTTTGGCACATCGGCCGAC GATGAGAGCTCTCCCTCTCTACTCGACAGCGGCAGTGGCGTTGGTGCGTC GGGGGACAGCAGCCACCGTGGTGGTGGTGGCTGGGGCTGGGACATGCAGA AAGAAAAAAACAGCGACGACGACAACAACAACCACGGCGAAGCGGCGGCC GAGGTGGCACGCGGCGCCTACCCAGCGGCCGAGGGCAGAGCAGGGGCAAC AGGGGCTGGCGGAGAGGCGAAAGAAGCGAAAGGCATCGAGGGACGCAGCA GCACCCCGACGGGCGGCGGAGTTACCTTCGCCGAAAACGAGACCAGCAAC AACAGCGATGATAGCGACTCGGACAACGGGTGGCTGGACCAACCCTTACC GTCTACCGGTCGCGGTGGAGCCAGCAGCGGCCACGTGTCAGCCCACCGCT TGAGGGTTGCAACTACCGGCCGTGGAAGAACGGGGGCCTCTGCTGGGATC GGCGGGGGCGGGGCCAGGGTCTCTGGTGCCGGGTTTCGGAGGCTGAGAGG GCGTGAGGCGGCGCACGTCCGTCTCCCGGCGAACTTCCGGCACAGCATGC AGGTCCTTCCTGGTCACAGCGCTGCGGTCGTGCGCCAATGGGAGCAAGGC CTCACGCGGCAGGTGCTGGGGTGATGTTGTTGAGACACGTATATGTATAC ACCGTAGATGTCGCAACCCCTTGAGTGATTTTCAAAGCTCGATTGCTCGA CAGCAGAAAATGCGGCAGCGGCGAAAATGGCCGCGTTGAAGACGGCTCTC GACAGGTGTCCGAAACCTATCGTTTCATGGATGTAAAATATTGTCTTCGT CGTGGAGGGTTCGAGCTTTGGAAATCGGTCCACGGTGCGTGATGTCTTTG TGTCACCTACGGTCCTGTAGTAATATCGAGGGCCAGTCGGACTTGGCGAA GGCCACAATTGGATTCAGCCGAGGGTTCACATGAGAGGACAACCGGAGCT TTTTGTGCGTACTTCTTGGCTTGTCGACGCTTGAATCGCAGGAGCAAGGG TTTGAGGCCTGACGGCAGGCGGTAGGAACTATAACATGAAAATATTTCCA CCCATCGGACCCATAGGACCCACAACGTTGTTGAAAGCCGAGCGGTTCCG CCTTACGTGCACCGGACGGCAACGGCCACAACCACGCCGGATTCGTAGGG TTAGGGTTAGGCTTCACGCTCCTTTTCTTGCCTCTTCCACTCTTGTCTCT TGAATCCGTGCCCAAATCAAACCAGGATCGCTTGCTGGAAGGGCGGCTCT TTTTCTCATGCTCGAAGGGTTACCCCCTCATGGTGTCCTCGGTGATCCAC TACAAGCCGCAGGAGGAGCAGGCCAAGAGGGCCAGGCAGAAACGGATCGA CGAGCGAGGGGCAGAGGCTTTCCAAATTCCAAAAAGGTGGCGACCTCACC CCGTCTCCCCCAACGCCCCACTCAGAACACATGATTTGATCGAACCATCA TCAGGACGAGTAGAAGCGAGAACAGTGAAAGAGTGTTTTCGTTTCTTCTC AAGGGATTCCTGACCCGCCAACGTCCCGATGCTCTTCGTGTTGCAGAGAT TGGCGAGGCTTCAGCTACGCGCATCTGTTGCCGGCTAGCACCGGCGCGCC CGGCGGGGAAAGCAGTGCCGGCGGTACCGCAGGCGGCGCTACTGCAGCCA TCCTCGGGGGCGGTGGAGGCGGCGTCGAAAGCGAAGGAGAAGGCACCATA GGGGGGGGTAGTGTTGGGGGGGGGGGGGGGATCGGGGACGGAGGAGACGG AACGGGGAGCGACAAGATGCCCTATGAGGCAGGATTCCTGGACGACCCGG CGTTAAAGGTCGGCAGGCACCGACACATGACGAAGGGTGACCGAAACACC GGCCCCGTGGTGAGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18302:103..3017+

>mRNA_Ecto-sp13_S_contig18302.5680.1 ID=mRNA_Ecto-sp13_S_contig18302.5680.1|Name=mRNA_Ecto-sp13_S_contig18302.5680.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1749bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18302:103..3017+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCACGTCAGATGCTGCAGCTGCTGCTGGCGACGAGACAGGAGGTGA
CGCAAAGCCAGAGGGCAAGGACGCCAACATCAACGCGACAACGGAGGAAT
CAGGCGAAGGAGATGAACAACAAGTGGGTGGAGTGTGCCCGCCAACCGCA
GTTGATGTCTCCGCCGCTAATGAAGCTTTACAGGGGCGCATCGTCGACAA
AGACCACAAGAGCAAAGATGCCGCCGCCGAGGCCGGTCGCCAGCCAAGCG
CCACGTTCGCGGACGCAAAGGGCGTGGACAACTGCTGTAGCAGTCCTATG
TCGACATCGCCGCCGCCGTCGCACCGCATAGGAGCACCACTGCCATCACC
ATCACTATCATCACCCCGCCGCAGAAATGAAGCGGCGAGCCCGGTTGCGC
CGACTGCGTCCGCCGCAGCCGCAGCGGCCAAGCTATTAAAGCAACACCAA
GAGCAGCGGGCGTCGGGACTGATGCCGGCGAACAAACGCCGGCTCCGCAT
CTACCCGACGGGGAGAAACCGCAACAGTAAGTGGGTCACGCGGGAGATTG
CCGCTCTCGACTTTCTCACGGGTCTTAAGATGCGCAACGAGGCCGCGATC
CTTGCTCAAGGGACAAGCGGCGGCGGCGGCGGCGGCGACTTTGGCACATC
GGCCGACGATGAGAGCTCTCCCTCTCTACTCGACAGCGGCAGTGGCGTTG
GTGCGTCGGGGGACAGCAGCCACCGTGGTGGTGGTGGCTGGGGCTGGGAC
ATGCAGAAAGAAAAAAACAGCGACGACGACAACAACAACCACGGCGAAGC
GGCGGCCGAGGTGGCACGCGGCGCCTACCCAGCGGCCGAGGGCAGAGCAG
GGGCAACAGGGGCTGGCGGAGAGGCGAAAGAAGCGAAAGGCATCGAGGGA
CGCAGCAGCACCCCGACGGGCGGCGGAGTTACCTTCGCCGAAAACGAGAC
CAGCAACAACAGCGATGATAGCGACTCGGACAACGGGTGGCTGGACCAAC
CCTTACCGTCTACCGGTCGCGGTGGAGCCAGCAGCGGCCACGTGTCAGCC
CACCGCTTGAGGGTTGCAACTACCGGCCGTGGAAGAACGGGGGCCTCTGC
TGGGATCGGCGGGGGCGGGGCCAGGGTCTCTGGTGCCGGGTTTCGGAGGC
TGAGAGGGCGTGAGGCGGCGCACGTCCGTCTCCCGGCGAACTTCCGGCAC
AGCATGCAGGTCCTTCCTGGTCACAGCGCTGCGGTCGTGCGCCAATGGGA
GCAAGGCCTCACGCGGCAGGATCGCTTGCTGGAAGGGCGGCTCTTTTTCT
CATGCTCGAAGGGTTACCCCCTCATGGTGTCCTCGGTGATCCACTACAAG
CCGCAGGAGGAGCAGGCCAAGAGGGCCAGGCAGAAACGGATCGACGAGCG
AGGGGCAGAGGCTTTCCAAATTCCAAAAAGAGATTGGCGAGGCTTCAGCT
ACGCGCATCTGTTGCCGGCTAGCACCGGCGCGCCCGGCGGGGAAAGCAGT
GCCGGCGGTACCGCAGGCGGCGCTACTGCAGCCATCCTCGGGGGCGGTGG
AGGCGGCGTCGAAAGCGAAGGAGAAGGCACCATAGGGGGGGGTAGTGTTG
GGGGGGGGGGGGGGATCGGGGACGGAGGAGACGGAACGGGGAGCGACAAG
ATGCCCTATGAGGCAGGATTCCTGGACGACCCGGCGTTAAAGGTCGGCAG
GCACCGACACATGACGAAGGGTGACCGAAACACCGGCCCCGTGGTGAGT
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