mRNA_Ecto-sp13_S_contig18302.5680.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: A0A6H5JD09_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD09_9PHAE) HSP 1 Score: 741 bits (1913), Expect = 7.390e-256 Identity = 474/589 (80.48%), Postives = 482/589 (81.83%), Query Frame = 1
Query: 394 MSTSDAAAAAGDETGGDAKPEGKDANINATTEESGEGDEQQVGGVCPPTAVDVSAANEALQGRIVDKDHKSKDAAAEAGRQPSATFADAKGVDNCCSSPMSTSPPPSHRIGAPLPSPSLSSPRRRNEAASPVAPTXXXXXXXX----KLLKQHQEQRASGLMPANKRRLRIYPTGRNRNSKWVTREIAALDFLTGLKMRNEAAILAQGTSGGXXXXDFGTSADDESS--PSLLDSGSGVGASGDSSXXXXXXXXXXXXXXXXXXXXXXXHGEAAAEVARGAYPAAEGRAGATXXXXXXXXXKGIEGRSSTPTGGGVTFAENETSNNSDDSDSDNGWLDQPLPSTGRGGASSGHVSAHRLRVATTGRGRTGASAGIGGGGARVSGAGFRRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVVS 2142
MST+DAAAAAGDETGG A PEGK+AN NAT EESG AV VSAA EA Q RIVD DHKSKDAAAEAGR PSATFADAK V + SSPM TS PPSHRIGAPLPSPSLS PRRRNEAASP+ T XXXXXXX KLLKQHQEQRASGLMPANKRRLRIYPTGRNRNSKWVTREIAALDFLTGLKMRNEAAILAQGTSG XXXX P LLDSGSGVGA GD S XXXXXXXXXXXXXXXXXXXHGEAAAEVARGAYPAAE RAGAT K IEGRSSTPT GGVTFA NET NNSDDSDSDNGWLDQPLPSTGRGGASSGHVSAHRLRVATTGRG TG S GIGGGGARVSGAGFRRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIP+RDWRGFSYAHLLPAST APGG+S XX VESE EGT+GG XXXXXX SDKMPY+AGFLDDPALKVGRHRHMTKGDRNTGPVVS
Sbjct: 1 MSTADAAAAAGDETGGHAMPEGKNANTNATMEESGXXXXXXXXXXXXXXAVYVSAAEEASQERIVD-DHKSKDAAAEAGRHPSATFADAKSVGDSSSSPMLTSLPPSHRIGAPLPSPSLSLPRRRNEAASPLGATAXXXXXXXXXXXKLLKQHQEQRASGLMPANKRRLRIYPTGRNRNSKWVTREIAALDFLTGLKMRNEAAILAQGTSGXXXXXXXXXXXXXXXXXXPPLLDSGSGVGALGDRSRRGGXXXXXXXXXXXXXXXXXXXHGEAAAEVARGAYPAAESRAGATGAGGEAKEAKDIEGRSSTPTAGGVTFAGNETKNNSDDSDSDNGWLDQPLPSTGRGGASSGHVSAHRLRVATTGRGGTGTSDGIGGGGARVSGAGFRRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPRRDWRGFSYAHLLPASTCAPGGDSSVGSTAGGAIVAILGGXXG-VESEREGTVGGGSVSGAGGIXXXXXXAGSDKMPYKAGFLDDPALKVGRHRHMTKGDRNTGPVVS 587
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: D7G4Y1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y1_ECTSI) HSP 1 Score: 470 bits (1209), Expect = 7.970e-157 Identity = 330/440 (75.00%), Postives = 335/440 (76.14%), Query Frame = 1
Query: 358 EVHIAE-GPTSITMSTSDAAAAAGDETGGDAKPEGKDANINATTEESGEGDEQQVGGVCPPTAVDVSAANEALQGRIVDKDHKSKDAAAEAGRQPSATFADAKGVDNCCSSPMSTSPPPSHRIGAPLPSPSLSSPRRRNEAASPVAPTXXXXXXXXKLL----KQHQEQRASGLMPANKRRLRIYPTGRNRNSKWVTREIAALDFLTGLKMRNEAAILAQGTSGGXXXXDFGTSADDESSPSLLDSGSGVGASGDSSXXXXXXXXXXXXXXXXXXXXXXXHGEAAAEVARGAYPAAEGRAGATXXXXXXXXXKGIEGRSSTPTGGGVTFAENETSNNSDDSDSDNGWLDQPLPSTGRGGASSGHVSAHRLRVATTGRGRTGASAGIGGGGARVSGAGFRRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQ 1662
EVHIA GPTS TMST DAAA+AGDET G+AKPE K+ANINATTE DAAAEAGRQPSATF+DAK V N SSPM SPPPSH IGAPLPS SLSSP XXXXXXXX KQHQEQRA GLMPANKRRLRIYPTGRNRNSKWVTREIAALDFLTGLKMRNEAAILAQGTSG XXXXDFG SADDESSPSLLDSGSGVG S DS XXXXXXXXXXXXXXXXXXXXXXX AAAEVARGAYPAAEGR G T K IEGR STPTGGGVTFA+NE NNSDDSDSDNGWLDQPLPSTGRGGASSGHVSA RLR ATTG G GASAGIGG ARVSGAGFRRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQ
Sbjct: 3 EVHIAAAGPTSKTMSTVDAAASAGDETRGEAKPEDKNANINATTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAAEAGRQPSATFSDAKSVGNSSSSPMLASPPPSHCIGAPLPSLSLSSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQHQEQRAPGLMPANKRRLRIYPTGRNRNSKWVTREIAALDFLTGLKMRNEAAILAQGTSGXXXXXDFGVSADDESSPSLLDSGSGVGTSRDSXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEVARGAYPAAEGRGGTTGAGGEAKEDKDIEGRRSTPTGGGVTFADNENKNNSDDSDSDNGWLDQPLPSTGRGGASSGHVSARRLRGATTGHGGMGASAGIGGXXARVSGAGFRRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQ 442
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: D7G4Y2_ECTSI (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y2_ECTSI) HSP 1 Score: 195 bits (495), Expect = 4.930e-51 Identity = 129/142 (90.85%), Postives = 132/142 (92.96%), Query Frame = 1
Query: 1717 MVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVVS 2142
MVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGG+S XXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXX S+KMPY+AGFLDDPALKVGRHRHMTKGDRNTGPVVS
Sbjct: 1 MVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGDSSVGSTAGGXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXAGSEKMPYKAGFLDDPALKVGRHRHMTKGDRNTGPVVS 142
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: A0A835YPH7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPH7_9STRA) HSP 1 Score: 147 bits (371), Expect = 6.190e-33 Identity = 105/211 (49.76%), Postives = 126/211 (59.72%), Query Frame = 1
Query: 1537 RRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIG----------GXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVV 2139
RRL G EA HVR+P FRH + LPG AA VRQWE+ L Q LL+GRLFFS +KGYPL V SVI Y+P+EE+ +R K +DERGAEAF++P+RDWRGFSY +LL A+ P + EG + G XXXXXXXXXXXXXXXX G LDDPAL VGRH+ + GD +TGPV+
Sbjct: 424 RRLGGPEATHVRVPRAFRHGLLQLPGQDAAEVRQWERSLANQG-LLDGRLFFSGTKGYPLAVCSVIRYEPKEEELRRRWHKLVDERGAEAFRVPRRDWRGFSYGYLLSAAR--PEKFKEPNHMRSRVQEQEAPQHQTLLHLEGSAHVPDDEPRRPGRPGTXXXXXXXXXXXXXXXXXXXXXXXXGVLDDPALSVGRHKQLLTGDEHTGPVI 631
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: A0A4D9D598_9STRA (Cyclin N-terminal domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D598_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.010e-19 Identity = 71/199 (35.68%), Postives = 90/199 (45.23%), Query Frame = 1
Query: 1543 LRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVV 2139
L G +A V +P + RH Q HSAAVVRQWE+ + + +L+GRLF S +GYPL+V+SV+ YKP E KR R ++++ERG EAF P DWRG Y LL A E GG + Y+ LDDPAL GR R + G GPVV
Sbjct: 39 LNGLDAFVVSVPESIRHKYQ----HSAAVVRQWERRV-KNAGILDGRLFISSRRGYPLVVASVVEYKPGSESEKRWRARQVNERGGEAFHRPVPDWRGVRYGALLHAERATCSAERDARDGGYLM------------------ACGGKDGVRAGAAPASHSPFGASGSSYDPASLDDPALSHGRTRQLNVGGPGLGPVV 214
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: A0A7S2RWQ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWQ1_9STRA) HSP 1 Score: 102 bits (253), Expect = 7.010e-19 Identity = 65/201 (32.34%), Postives = 86/201 (42.79%), Query Frame = 1
Query: 1537 RRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVV 2139
RRL G A V +P RH + + G A +RQWE + RLFFS ++ YP+ V S + Y P EE+AKR QK +D++ +AFQ+P RDWRG SYAHLL G E+ G Y+ G LDDP + G+ H+ +GD GP V
Sbjct: 183 RRLDGISAPSVTVPRKIRHRLARVGG---AALRQWELETIHSPTMEHSRLFFSGNRAYPVAVGSFLRYDPSEEEAKRRLQKLVDQKAVDAFQVPHRDWRGTSYAHLLVPRPFLVGAETWT---------------------------GAENPEDNPLVADQVHQEHDQDWSYQPGVLDDPDMVQGKFSHVIRGDERLGPFV 353
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: W2M7Q4_PHYPR (Cyclin N-terminal domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2M7Q4_PHYPR) HSP 1 Score: 99.8 bits (247), Expect = 3.120e-18 Identity = 68/202 (33.66%), Postives = 89/202 (44.06%), Query Frame = 1
Query: 1537 RRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVVS 2142
RRL G EA V +P FRH ++AVVR+WE G+T Q LL+ RLFFS GYPL S++I+Y E A+R R I E DWRG SY LL A+ A +++P+ A FLDDP + GRHRH+ +GD++ GP+VS
Sbjct: 101 RRLPGMEATIVHVPPLFRHRFTTKFPAASAVVRRWE-GVTAQQGLLDSRLFFSRGCGYPLATSTIINYNGNETTARRRRFASISGLALERPSPTHYDWRGTSYFRLLHATWSA------------------------------------------CDPDRDREDAHPERVPFSANFLDDPEFRQGRHRHVVRGDKSLGPIVS 259
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: A0A3M6V9W7_9STRA (Cyclin N-terminal domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V9W7_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 7.210e-18 Identity = 67/202 (33.17%), Postives = 93/202 (46.04%), Query Frame = 1
Query: 1537 RRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVVS 2142
+RL G EA V +P+ FR+ ++AVVR+WE G+T Q LL+ RLFFS GYPL S++I+Y E A+R R + E DWRG SY LL A+ A + + E +++PY A FLDDP + GRHRH+ +GD++ GP+VS
Sbjct: 94 KRLPGMEATVVHVPSLFRYRFTTKFPAASAVVRRWE-GVTAQQGLLDARLFFSRGCGYPLATSTIINYNGNETTARRIRFASMSALALERPSSTNYDWRGTSYFRLLHATWSA-----------------------CDADRDREDA-------------------HPERVPYSANFLDDPEFRQGRHRHVVRGDKSLGPIVS 252
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: A0A6A3ULW9_9STRA (Cyclin N-terminal domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ULW9_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 7.380e-17 Identity = 65/202 (32.18%), Postives = 88/202 (43.56%), Query Frame = 1
Query: 1537 RRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVVS 2142
RRL G A V +P FR+ ++AVVR+WE G+T Q LL+ RLFFS GYPL S++I+Y E A+R R + E DWRG SY LL A+ A +++PY A FLDDP + GRHRH+ +GD++ GP++S
Sbjct: 105 RRLPGMAATVVHVPPLFRYRFTTKFPAASAVVRRWE-GVTAQQGLLDARLFFSRGCGYPLATSTIINYNGNETTARRRRFASLSGLALERPSPSHYDWRGTSYFRLLHATWSA------------------------------------------CDPDRDREDAHPERVPYSANFLDDPEFRQGRHRHVVRGDKSLGPIIS 263
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Match: H3GGL8_PHYRM (Cyclin N-terminal domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GGL8_PHYRM) HSP 1 Score: 89.7 bits (221), Expect = 4.840e-15 Identity = 62/202 (30.69%), Postives = 89/202 (44.06%), Query Frame = 1
Query: 1537 RRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQIPKRDWRGFSYAHLLPASTGAPGGESXXXXXXXXXXXXXXXXXXXXVESEGEGTIGGXXXXXXXXXXXXXXXXXSDKMPYEAGFLDDPALKVGRHRHMTKGDRNTGPVVS 2142
RRL G A + +P FR+ +AVVR+WE G+T Q L + RLFFS GYPL ++++Y E A+R R + E DWRG SY LL A+ + +S+ + +++PY A FLDDP + GRHRH+ +GD++ GP+VS
Sbjct: 94 RRLPGMAATLIHVPPLFRYRFTTKFPAGSAVVRRWE-GVTAQQGLQDARLFFSRGCGYPLATFTILNYNGNETTARRRRFASLSSLALERPSPTHYDWRGTSYFRLLHATWSS-------------------------CDSDRD-----------------QEDAHPERVPYSANFLDDPEFRQGRHRHVVRGDKSLGPIVS 252 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18302.5680.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18302.5680.1 >prot_Ecto-sp13_S_contig18302.5680.1 ID=prot_Ecto-sp13_S_contig18302.5680.1|Name=mRNA_Ecto-sp13_S_contig18302.5680.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=583bp MSTSDAAAAAGDETGGDAKPEGKDANINATTEESGEGDEQQVGGVCPPTAback to top mRNA from alignment at Ecto-sp13_S_contig18302:103..3017+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18302.5680.1 ID=mRNA_Ecto-sp13_S_contig18302.5680.1|Name=mRNA_Ecto-sp13_S_contig18302.5680.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2915bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18302:103..3017+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18302:103..3017+ >mRNA_Ecto-sp13_S_contig18302.5680.1 ID=mRNA_Ecto-sp13_S_contig18302.5680.1|Name=mRNA_Ecto-sp13_S_contig18302.5680.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1749bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18302:103..3017+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |