prot_Ecto-sp13_S_contig1830.5679.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1830.5679.1
Unique Nameprot_Ecto-sp13_S_contig1830.5679.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length183
Homology
BLAST of mRNA_Ecto-sp13_S_contig1830.5679.1 vs. uniprot
Match: A0A6H5K5D1_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5D1_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.730e-45
Identity = 98/125 (78.40%), Postives = 106/125 (84.80%), Query Frame = 0
Query:    1 MKLRWELGALLTVACFSVATGFTTYYSSSGCLSSFVSDGWCDTSNNNFDCDYDGGDCCSCNCLDDTYECGIVGFNCIDPTSSCYXXXXXXXXXXXXXXXXXI--YLDDDYSVPTYNLDDDDGSTS 123
            MK RWELGALLTVAC SVATGFTTY  SSGC +S++SDG+CD+SNN   CDYDGGDCCSC+CLDDTY+CG+VGF CIDPTSSCYXXXXXXXXXXXXXXXXX   YLDDDYSVPT       GSTS
Sbjct:    1 MKPRWELGALLTVACISVATGFTTY-DSSGCFTSYISDGFCDSSNNISGCDYDGGDCCSCDCLDDTYQCGVVGFTCIDPTSSCYXXXXXXXXXXXXXXXXXXGNYLDDDYSVPTXXXXXXXGSTS 124          
BLAST of mRNA_Ecto-sp13_S_contig1830.5679.1 vs. uniprot
Match: D7FSP3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP3_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 6.880e-32
Identity = 65/122 (53.28%), Postives = 78/122 (63.93%), Query Frame = 0
Query:    1 MKLRWELGALLTVACFSVATGFTTYYSSSGCLSSFVSDGWCDTSNNNFDCDYDGGDCCSCNCLDDTYECGIVGFNCIDPTSSCYXXXXXXXXXXXXXXXXXIYLDDD---YSVPTYNLDDDD 119
            MK +WELGAL+T ACFS A+G+TT  + S C   ++SDG CD+SNNN  C+YDGGDCCSC+C DDTYECG  GF C+DP+SSC                   Y DDD   Y  PTY+ D DD
Sbjct:    1 MKTQWELGALVTAACFSTASGYTTT-TFSDCYQEWISDGMCDSSNNNSGCEYDGGDCCSCDCFDDTYECGTDGFTCLDPSSSCTYHH---------------YYDDDGDLYDSPTYDYDVDD 106          
BLAST of mRNA_Ecto-sp13_S_contig1830.5679.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 4.960e-30
Identity = 65/146 (44.52%), Postives = 84/146 (57.53%), Query Frame = 0
Query:   36 VSDGWCDTSNNNFDCDYDGGDCCSCNCLDDTYECGIVGFNCIDPTSSCYXXXXXXXXXXXXXXXXXIYLDD-----DYSVPTYNLDDDDGSTSCTTSYISDGMCDLSNNISGCDYDGGDCCSCDCLDDIYECGVSGFTCIDPTSSC 176
            + DG CD  NNN +CD+DGGDCC+C C+   Y CG   F+C DP+ S                    Y DD     D    TY++ +  GST+C +SY  DG CD   N + C++DGGDCC CDC+D  Y+CGV G+ C+DPTSSC
Sbjct:  318 IGDGHCDYYNNNEECDWDGGDCCACTCVSGYYTCGYYTFDCEDPSVSTDCSTTSTLDSDDWYGGYGYYTDDIWDSGDDFYGTYDVYNY-GSTACISSYTGDGWCDSFYNHADCEWDGGDCCECDCVDATYDCGVVGYDCLDPTSSC 462          
BLAST of mRNA_Ecto-sp13_S_contig1830.5679.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 1.350e-29
Identity = 66/146 (45.21%), Postives = 83/146 (56.85%), Query Frame = 0
Query:   38 DGWCDTSNNNFDCDYDGGDCCSCNCLDDTYECGIVGFNCIDPTSSCYXXXXXXXXXXXXXXXXXIYLDDDYSVPTYNLDDDDGSTSCTTSYISDGMCDLSNNISGCDYDGGDCCSCDC----LDDIYECGVSGFTCIDPTSSCYCE 179
            DGWCD  NNN +C YD GDCCSC C+D TYECGIVGF+C+DP++ C                    +DDDY  P+  + DD G+       +++G CD  NN   C YDGGDCC C C    L+D  +   SGF C DPT+ C+ E
Sbjct:  328 DGWCDDDNNNKECGYDSGDCCSCTCVDGTYECGIVGFDCVDPSAEC--------------------VDDDY--PSTGVTDDCGNAGT----VANGYCDFDNNKEECAYDGGDCCECTCEPSGLEDGSDSCTSGFDCQDPTAPCFDE 447          
BLAST of mRNA_Ecto-sp13_S_contig1830.5679.1 vs. uniprot
Match: A0A6H5KN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN00_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.290e-27
Identity = 58/84 (69.05%), Postives = 66/84 (78.57%), Query Frame = 0
Query:    1 MKLRWELGALLTVACFSVATGFTTYYSSSGCLSSFVSDGWCDTSNNNFDCDYDGGDCCSCNCLDDTYECG-IVGFNCIDPTSSC 83
            +K RWELGALLTVACFS A   TT   SS C  S++SDG CD+SNNN +CDYDGGDCCSC+C DDTYECG +  F CIDP+SSC
Sbjct:  102 IKPRWELGALLTVACFSSAQQGTT---SSDCSDSWISDGMCDSSNNNSNCDYDGGDCCSCDCFDDTYECGSVTAFTCIDPSSSC 182          
BLAST of mRNA_Ecto-sp13_S_contig1830.5679.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 7.250e-25
Identity = 61/146 (41.78%), Postives = 78/146 (53.42%), Query Frame = 0
Query:   29 SGCLSSFVSDGWCDTSNNNFDCDYDGGDCCSCNCLDDT-YECGIVGFNCIDPTSSCYXXXXXXXXXXXXXXXXXIYLDDDYSVPTYNLDDDDGSTSCTTSYISDGMCDLSNNISGCDYDGGDCCSCDCLDDI-YECGVSGFTCIDP 172
            S C   +  DG+CD  NN+  CDYDGGDCC C+C+D   Y CG +GF C+DP                           D    T    ++   T+C  S+++DG CD SNN   CDYDGGDCC C C+D   YECG +GF+C+DP
Sbjct:   85 SECHEDWAKDGFCDLVNNHPSCDYDGGDCCECSCIDGPDYGCGSIGFACLDP---------------------------DCGNTTETAPEN---TTCEESWMNDGYCDSSNNYPSCDYDGGDCCECSCVDGHDYECGSNGFSCLDP 200          
BLAST of mRNA_Ecto-sp13_S_contig1830.5679.1 vs. uniprot
Match: D7FX77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX77_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 9.310e-23
Identity = 70/194 (36.08%), Postives = 87/194 (44.85%), Query Frame = 0
Query:   36 VSDGWCDTSNNNFDCDYDGGDCCSCNCLDDTY-ECGIVGFNCIDPTSSCYXXXXXXXXXXXXXXXXXIY-----------------------LDDDY---SVPTYNLDDDDGSTSCTTSY-------------------ISDGMCDLSNNISGCDYDGGDCCSCDCLD--DIYECGVSGFTCIDPTSSCYCETK 181
            + DG CD  NNN +CD+DGGDCCSC C   +Y  C     +C DP ++C                   Y                       LD  Y   S+ TY   D+D STS  ++Y                   +SDG CD  NN + CDYDGGDCC CDC D  ++YECGV G+ C+D TS CY  T 
Sbjct:  231 IGDGSCDYYNNNEECDWDGGDCCSCTCEGSSYYSCSSYSMDCQDPNANCTTPSPTPYCPWASDGYCDSYYNTEDCDWDGGDCCAYGCSSTTCLDPIYGCDSITTY-YGDNDVSTSTFSTYLTSSDADSVSSGCFDGDWAVSDGKCDSGNNNAACDYDGGDCCECDCYDYGEVYECGVVGYYCLDQTSLCYGSTS 423          
BLAST of mRNA_Ecto-sp13_S_contig1830.5679.1 vs. uniprot
Match: A0A6H5J6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K0_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.490e-21
Identity = 62/152 (40.79%), Postives = 72/152 (47.37%), Query Frame = 0
Query:   35 FVSDGWCDTSNNNFDCDYDGGDCCSCNCLDDTYECGIVGFNCIDPTSSCYXXXXXXXXXXXXXXXXXIYLDDDYSVPT---YNLDDDDGSTSCTTSYISDGMCDLSNNISGCDYDGGDCCSCDCLD--DIYECGVSGFTCIDPTSSCYCETK 181
            F SDG+CD+  N  DCD+DGGDCC+  C   T         C+DP   C                   Y D D S  T   Y    DD         +SDG CD  NN + CDYDGGDCC CDC D  + YECG  G+ C+D TS CY  T 
Sbjct:  289 FASDGYCDSYYNTEDCDWDGGDCCAYGCSSTT---------CLDPIYGC-------------DSITTSYGDSDDSTSTFITYTTSSDDSGCFDGVWAVSDGKCDSGNNNAACDYDGGDCCECDCYDYGEAYECGAFGYYCLDQTSICYGSTS 418          
BLAST of mRNA_Ecto-sp13_S_contig1830.5679.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.350e-20
Identity = 55/144 (38.19%), Postives = 71/144 (49.31%), Query Frame = 0
Query:   36 VSDGWCDTSNNNFDCDYDGGDCCSCNCLDDTYECGIVGFNCIDPTSSCYXXXXXXXXXXXXXXXXXIYLDDDYSVPTYNLDDDDGSTSCTTSYISDGMCDLSNNISGCDYDGGDCCSCDC---LDDIYECGVSGFTCIDPTSSC 176
            + DG+C   NNN  CDYDGGDCC C C+D  Y CG V F CIDP+++C                    +DDD           DG      + + +G C+ +NNI  CDYD GDCC C C    DD+ +     F C+DP + C
Sbjct:   74 IGDGFCSDENNNEVCDYDGGDCCECTCVDAFYPCGYVAFACIDPSAAC--------------------VDDDNITADIAESCHDGGG--YVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIESDDLSDFSCVDFACVDPNAPC 195          
BLAST of mRNA_Ecto-sp13_S_contig1830.5679.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 8.020e-15
Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 0
Query:   15 CFSVATGFTTYYSS--SGCLSSFVSDGWCDTSNNNFDCDYDGGDCCSCNCLDDTYECGIVGFNCIDPTSS 82
            C S A   +  +SS  S C+  +V+DGWCD  NNN +C++DGGDCC C C+D  YECGI GF+C+DP+++
Sbjct: 1954 CSSSAAAQSKNHSSTTSDCIGVYVTDGWCDLENNNAECNWDGGDCCECTCVDSQYECGIQGFSCLDPSAT 2023          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1830.5679.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5K5D1_9PHAE1.730e-4578.40LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FSP3_ECTSI6.880e-3253.28LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JVP4_9PHAE4.960e-3044.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTT4_9PHAE1.350e-2945.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN00_9PHAE1.290e-2769.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5Y7_ECTSI7.250e-2541.78Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FX77_ECTSI9.310e-2336.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J6K0_9PHAE1.490e-2140.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJK5_9PHAE2.350e-2038.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHG7_ECTSI8.020e-1551.43LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainSMARTSM00004NL_2coord: 117..151
e-value: 0.0033
score: 20.8
coord: 27..58
e-value: 0.44
score: 3.4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..182
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..31
score: 6.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.79
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1830contigEcto-sp13_S_contig1830:9681..15222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1830.5679.1mRNA_Ecto-sp13_S_contig1830.5679.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1830 9681..15222 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1830.5679.1 ID=prot_Ecto-sp13_S_contig1830.5679.1|Name=mRNA_Ecto-sp13_S_contig1830.5679.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp
MKLRWELGALLTVACFSVATGFTTYYSSSGCLSSFVSDGWCDTSNNNFDC
DYDGGDCCSCNCLDDTYECGIVGFNCIDPTSSCYYHHYYDDDYYDDDDDD
DIYLDDDYSVPTYNLDDDDGSTSCTTSYISDGMCDLSNNISGCDYDGGDC
CSCDCLDDIYECGVSGFTCIDPTSSCYCETKY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom