prot_Ecto-sp13_S_contig18288.5672.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18288.5672.1
Unique Nameprot_Ecto-sp13_S_contig18288.5672.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length217
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18288.5672.1 vs. uniprot
Match: A0A6H5KYC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYC2_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 8.510e-11
Identity = 48/77 (62.34%), Postives = 48/77 (62.34%), Query Frame = 0 
Query:  140 RMPREGPDGATFMXXXXXXXXXXXXXXXXXXXXXXASANGCRMKHDLVAEAXXXXXXXXXRWLLRDSEEALEKKLSS 216
            RMPREGPDGATFM                      A ANGCRMKHDLVAE XXXXXXXXX  LLR SEE  EKKLSS
Sbjct:   19 RMPREGPDGATFMCPWDEDVTKWAVVGGHLDVLKWALANGCRMKHDLVAEXXXXXXXXXXXXLLRGSEEESEKKLSS 95
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18288.5672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KYC2_9PHAE8.510e-1162.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 6..209
e-value: 1.3E-13
score: 52.3
NoneNo IPR availablePANTHERPTHR12393:SF6coord: 2..55
NoneNo IPR availablePANTHERPTHR12393SPHINGOMYELIN PHOSPHODIESTERASE RELATEDcoord: 93..208
coord: 31..109
coord: 55..147
NoneNo IPR availablePANTHERPTHR12393SPHINGOMYELIN PHOSPHODIESTERASE RELATEDcoord: 2..55
NoneNo IPR availablePANTHERPTHR12393:SF6coord: 93..208
coord: 31..109
coord: 55..147
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 91..183
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 10..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18288contigEcto-sp13_S_contig18288:535..3236 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18288.5672.1mRNA_Ecto-sp13_S_contig18288.5672.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18288 103..3236 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18288.5672.1 ID=prot_Ecto-sp13_S_contig18288.5672.1|Name=mRNA_Ecto-sp13_S_contig18288.5672.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=217bp
ATGCLWGPTTCSQAALGGHLRVLQWVRENKCKWNHQTTAAAVAGGHLDIL
KWVRSEGCHWKAKSCSQAARWGRFDLLKWLRANGCPWDASTCYEAAIAGR
LDILEWVRGDPEEEKKCPWNKRACHGAARAGHLHILRWLRMPREGPDGAT
FMCPWDEDVTKWAVVGGHLDVLKWASANGCRMKHDLVAEAAVAGHVHVRR
WLLRDSEEALEKKLSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf