prot_Ecto-sp13_S_contig18286.5671.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18286.5671.1
Unique Nameprot_Ecto-sp13_S_contig18286.5671.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length147
Homology
BLAST of mRNA_Ecto-sp13_S_contig18286.5671.1 vs. uniprot
Match: D8LBC1_ECTSI (Uncharacterized protein n=3 Tax=Eukaryota TaxID=2759 RepID=D8LBC1_ECTSI)

HSP 1 Score: 286 bits (733), Expect = 3.720e-97
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0
Query:    1 RKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMSRFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKH 147
            RKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMSRFGLLGEDE+ELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKH
Sbjct:   11 RKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMSRFGLLGEDEKELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKH 157          
BLAST of mRNA_Ecto-sp13_S_contig18286.5671.1 vs. uniprot
Match: A0A836CIZ7_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ7_9STRA)

HSP 1 Score: 258 bits (659), Expect = 6.760e-86
Identity = 128/147 (87.07%), Postives = 141/147 (95.92%), Query Frame = 0
Query:    1 RKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMSRFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKH 147
            RKT+KTPRRP+EKERLD ELKLCGEYGLRCKREIWRVQ+ALAKIRKAAR+LLTLD KDPKRLFEGPALLRRM+RFGLL E+E+ELDFVLQL+T+K+LERRLQTKVFKQGLAKSIHHARVLI+ RHIRVGKQLVN+P F VR+DSEKH
Sbjct:   11 RKTYKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQYALAKIRKAARELLTLDAKDPKRLFEGPALLRRMARFGLLTEEEKELDFVLQLSTQKLLERRLQTKVFKQGLAKSIHHARVLIRQRHIRVGKQLVNIPSFTVRVDSEKH 157          
BLAST of mRNA_Ecto-sp13_S_contig18286.5671.1 vs. uniprot
Match: A0A7S2V9P4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9P4_9STRA)

HSP 1 Score: 258 bits (658), Expect = 9.930e-86
Identity = 130/147 (88.44%), Postives = 140/147 (95.24%), Query Frame = 0
Query:    1 RKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMSRFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKH 147
            RKT KTPRRPYEKERLD ELKLCGEYGLRCKREIWRVQ ALAKIRKAAR+LLTL+ KDP+RLFEGPALLRRMSR+GLL +DE+ELDFVLQL+T+K+LERRLQTKVFKQGLAKSIHHARVLIK RHIRVGKQLVNVP F+VRMDSEKH
Sbjct:   11 RKTSKTPRRPYEKERLDQELKLCGEYGLRCKREIWRVQLALAKIRKAARELLTLEPKDPRRLFEGPALLRRMSRYGLLMDDEKELDFVLQLSTQKLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQLVNVPSFLVRMDSEKH 157          
BLAST of mRNA_Ecto-sp13_S_contig18286.5671.1 vs. uniprot
Match: A0A7S2BVT2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BVT2_9STRA)

HSP 1 Score: 251 bits (641), Expect = 3.860e-83
Identity = 127/145 (87.59%), Postives = 135/145 (93.10%), Query Frame = 0
Query:    3 TFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMSRFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKH 147
            T KTPRR YEKERLD ELKLCGEYGLRCKREIWRVQ ALAKIRKAAR LLTLD KDPKRLFEGPALLR+M R+GLL E+E+ELDFVLQLTT+K+LERRLQTKVFKQGLAKSIHHARVLIK RHIRVGKQLVNVP F+VR+DSEKH
Sbjct:   13 TSKTPRRAYEKERLDQELKLCGEYGLRCKREIWRVQLALAKIRKAARDLLTLDVKDPKRLFEGPALLRKMVRYGLLSEEEKELDFVLQLTTQKLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQLVNVPSFLVRVDSEKH 157          
BLAST of mRNA_Ecto-sp13_S_contig18286.5671.1 vs. uniprot
Match: A0A7S0TCI6_9STRA (Hypothetical protein n=2 Tax=Pelagophyceae TaxID=35675 RepID=A0A7S0TCI6_9STRA)

HSP 1 Score: 246 bits (628), Expect = 3.930e-81
Identity = 123/146 (84.25%), Postives = 136/146 (93.15%), Query Frame = 0
Query:    2 KTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMSRFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKH 147
            KT KTPRRP+EKER+D ELKLCGEYGLRCKRE+WRVQFALAKIRKAAR+LLTLD KDPKRLFEG ALLRRM+R+GLL E E +LD +LQ+TT+K+LERRLQTKVFKQGLAKSIHHARVLIK RHIRVGKQ+VNVP FMVR+DSEKH
Sbjct:   12 KTSKTPRRPFEKERIDGELKLCGEYGLRCKRELWRVQFALAKIRKAARELLTLDPKDPKRLFEGAALLRRMARYGLLDETELDLDAILQMTTQKLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQVVNVPSFMVRVDSEKH 157          
BLAST of mRNA_Ecto-sp13_S_contig18286.5671.1 vs. uniprot
Match: A0A6G0XI73_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XI73_9STRA)

HSP 1 Score: 244 bits (624), Expect = 4.940e-80
Identity = 121/147 (82.31%), Postives = 135/147 (91.84%), Query Frame = 0
Query:    1 RKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMSRFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKH 147
            RKT++TP R +EKERLD E+KL GEYGLRCKREIWRVQ+ LAK+RKAARQLLTLD KDPKRLFEGPAL+RR+ RFGLL EDE ELDFVLQ+ T+K+LERRLQTKVFKQGLAKSIHHARVLIK RHIRVG+QLV+VP FMVR+DSEKH
Sbjct:   11 RKTYRTPSRAFEKERLDQEMKLLGEYGLRCKREIWRVQYTLAKLRKAARQLLTLDPKDPKRLFEGPALMRRLKRFGLLAEDENELDFVLQMNTQKLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGRQLVDVPSFMVRLDSEKH 157          
BLAST of mRNA_Ecto-sp13_S_contig18286.5671.1 vs. uniprot
Match: A0A7S1BHT3_9STRA (Hypothetical protein n=5 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1BHT3_9STRA)

HSP 1 Score: 243 bits (620), Expect = 5.500e-80
Identity = 125/147 (85.03%), Postives = 134/147 (91.16%), Query Frame = 0
Query:    1 RKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMSRFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKH 147
            RKT KTPRRPYEKERLD+ELKL GEYGLRCKRE+WRVQFALAK+RKAAR LLTLD KDPKR+FEG ALLRRMSR+GLL EDE ELDFVLQL+T+K+LERRLQTKVFKQGLAKSIHHARVLI+ RHIRVG QLVNVP F VR  SEKH
Sbjct:   11 RKTSKTPRRPYEKERLDAELKLVGEYGLRCKREVWRVQFALAKLRKAARTLLTLDPKDPKRVFEGEALLRRMSRYGLLNEDELELDFVLQLSTQKILERRLQTKVFKQGLAKSIHHARVLIRQRHIRVGGQLVNVPSFNVRTSSEKH 157          
BLAST of mRNA_Ecto-sp13_S_contig18286.5671.1 vs. uniprot
Match: K0SZN6_THAOC (Uncharacterized protein n=8 Tax=Bacillariophyta TaxID=2836 RepID=K0SZN6_THAOC)

HSP 1 Score: 243 bits (619), Expect = 7.550e-80
Identity = 124/147 (84.35%), Postives = 134/147 (91.16%), Query Frame = 0
Query:    1 RKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMSRFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKH 147
            RKT+KTPRRPYEKERLD+ELKL GEYGLRCKREIWRVQ+ALAK+RKAAR LLTLD KDPKR+FEG ALLRRMSR+GLL +DE ELDFVLQLTT+K+LERRLQTKVFKQGLAKSIHHARVLI+ RHI VG QLVNVP F VR  SEKH
Sbjct:   11 RKTYKTPRRPYEKERLDAELKLVGEYGLRCKREIWRVQYALAKLRKAARVLLTLDPKDPKRIFEGAALLRRMSRYGLLADDELELDFVLQLTTQKLLERRLQTKVFKQGLAKSIHHARVLIRQRHISVGGQLVNVPSFNVRTSSEKH 157          
BLAST of mRNA_Ecto-sp13_S_contig18286.5671.1 vs. uniprot
Match: B8C1H2_THAPS (RS9, ribosomal protein 9 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1H2_THAPS)

HSP 1 Score: 242 bits (618), Expect = 1.070e-79
Identity = 124/147 (84.35%), Postives = 133/147 (90.48%), Query Frame = 0
Query:    1 RKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMSRFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKH 147
            RKT+KTPRRPYEKERLD+ELKL GEYGLRCKREIWR Q+ALAK+RKAAR LLTLD KDPKR+FEG ALLRRMSR+GLL EDE ELDFVLQLTT+K+LERRLQTKVFKQGLAKSIHHARVLI+ RHI VG QLVNVP F VR  SEKH
Sbjct:   11 RKTYKTPRRPYEKERLDAELKLVGEYGLRCKREIWRCQYALAKLRKAARTLLTLDPKDPKRIFEGTALLRRMSRYGLLAEDELELDFVLQLTTQKLLERRLQTKVFKQGLAKSIHHARVLIRQRHISVGGQLVNVPSFNVRTSSEKH 157          
BLAST of mRNA_Ecto-sp13_S_contig18286.5671.1 vs. uniprot
Match: A0A7S2SP92_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP92_9STRA)

HSP 1 Score: 242 bits (618), Expect = 1.110e-79
Identity = 121/146 (82.88%), Postives = 136/146 (93.15%), Query Frame = 0
Query:    2 KTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMSRFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKH 147
            KT KTPRRP+EKERLD ELKLCGEYGLRCKREIWRVQ ALAKIRKAAR+LLTLD KD KR+FEGPALLR+M+R+GLL ++E+ELDFVLQLTT+K+LERRLQT+VFK  LAKSIHHARVLIK RHI+VGKQLVNVP F+VR+DSEKH
Sbjct:   12 KTSKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQLALAKIRKAARELLTLDPKDAKRVFEGPALLRKMARYGLLTDEEKELDFVLQLTTQKLLERRLQTRVFKSHLAKSIHHARVLIKQRHIKVGKQLVNVPSFLVRVDSEKH 157          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18286.5671.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBC1_ECTSI3.720e-9799.32Uncharacterized protein n=3 Tax=Eukaryota TaxID=27... [more]
A0A836CIZ7_9STRA6.760e-8687.07Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A7S2V9P4_9STRA9.930e-8688.44Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2BVT2_9STRA3.860e-8387.59Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0TCI6_9STRA3.930e-8184.25Hypothetical protein n=2 Tax=Pelagophyceae TaxID=3... [more]
A0A6G0XI73_9STRA4.940e-8082.31Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S1BHT3_9STRA5.500e-8085.03Hypothetical protein n=5 Tax=Bacillariophyta TaxID... [more]
K0SZN6_THAOC7.550e-8084.35Uncharacterized protein n=8 Tax=Bacillariophyta Ta... [more]
B8C1H2_THAPS1.070e-7984.35RS9, ribosomal protein 9 n=1 Tax=Thalassiosira pse... [more]
A0A7S2SP92_9STRA1.110e-7982.88Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001912Ribosomal protein S4/S9, N-terminalSMARTSM01390Ribosomal_S4_2coord: 1..98
e-value: 8.2E-18
score: 75.2
IPR001912Ribosomal protein S4/S9, N-terminalPFAMPF00163Ribosomal_S4coord: 8..54
e-value: 1.2E-6
score: 29.3
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 98..146
e-value: 1.5E-11
score: 46.3
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 99..142
e-value: 4.5E-10
score: 39.1
IPR005710Ribosomal protein S4/S9, eukaryotic/archaealTIGRFAMTIGR01018TIGR01018coord: 2..147
e-value: 7.8E-58
score: 193.0
NoneNo IPR availablePANTHERPTHR11831:SF28coord: 2..147
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 2..143
IPR022801Ribosomal protein S4/S9PANTHERPTHR1183130S 40S RIBOSOMAL PROTEINcoord: 2..147
IPR018079Ribosomal protein S4, conserved sitePROSITEPS00632RIBOSOMAL_S4coord: 97..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18286contigEcto-sp13_S_contig18286:753..3512 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18286.5671.1mRNA_Ecto-sp13_S_contig18286.5671.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18286 753..3512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18286.5671.1 ID=prot_Ecto-sp13_S_contig18286.5671.1|Name=mRNA_Ecto-sp13_S_contig18286.5671.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=147bp
RKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQ
LLTLDTKDPKRLFEGPALLRRMSRFGLLGEDERELDFVLQLTTEKMLERR
LQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001912Ribosomal_S4/S9_N
IPR036986S4_RNA-bd_sf
IPR002942S4_RNA-bd
IPR005710Ribosomal_S4/S9_euk/arc
IPR022801Ribosomal_S4/S9
IPR018079Ribosomal_S4_CS