prot_Ecto-sp13_S_contig18281.5669.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18281.5669.1
Unique Nameprot_Ecto-sp13_S_contig18281.5669.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length231
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18281.5669.1 vs. uniprot
Match: D7G3H0_ECTSI (Globin, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H0_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 8.470e-33
Identity = 88/92 (95.65%), Postives = 90/92 (97.83%), Query Frame = 0 
Query:    1 MMVARSGVIAGDVEGCHSVIVEGTVIGNVSASVVVLRRYANVQGNVWCKDLAAAATAVFRNRATESPVPSXXXXXXXXXXXXXXXXGVIGDA 92
            MMVARSGVIAGDVEGCHSVIVEGT+IGNVSASVVVLRRYANVQGNVWCKDLAAAATAVFRNRATESP PSXXXXXXXXXXXXXXXX V+GDA
Sbjct:   73 MMVARSGVIAGDVEGCHSVIVEGTIIGNVSASVVVLRRYANVQGNVWCKDLAAAATAVFRNRATESPAPSXXXXXXXXXXXXXXXXXVMGDA 164
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BLAST of mRNA_Ecto-sp13_S_contig18281.5669.1 vs. uniprot
Match: A0A6H5KC50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC50_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 9.530e-18
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0 
Query:    1 MMVARSGVIAGDVEGCHSVIVEGTVIGNVSASVVVLRRYANVQG 44
            MMVARSGVIAGDVEGCHSVIVEGTVIGNVSASVVVLRRYANVQG
Sbjct:   37 MMVARSGVIAGDVEGCHSVIVEGTVIGNVSASVVVLRRYANVQG 80
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BLAST of mRNA_Ecto-sp13_S_contig18281.5669.1 vs. uniprot
Match: A0A6H5K1U5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1U5_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 7.740e-10
Identity = 51/60 (85.00%), Postives = 54/60 (90.00%), Query Frame = 0 
Query:   37 RRYANVQGNVWCKDLAAAATAVFRNRATESPVPSXXXXXXXXXXXXXXXXGVIGDAGSRS 96
            R +A+   NVWCKDLAAAATAVFRNRATESP PSXXXXXXXXXXXXXXX GV+GDAGSRS
Sbjct:   12 RPFASKHANVWCKDLAAAATAVFRNRATESPAPSXXXXXXXXXXXXXXXSGVMGDAGSRS 71
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18281.5669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G3H0_ECTSI8.470e-3395.65Globin, putative n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5KC50_9PHAE9.530e-18100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1U5_9PHAE7.740e-1085.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007607Bactofilin A/BPFAMPF04519Bactofilincoord: 2..60
e-value: 2.4E-7
score: 31.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18281contigEcto-sp13_S_contig18281:907..2050 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18281.5669.1mRNA_Ecto-sp13_S_contig18281.5669.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18281 314..2137 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18281.5669.1 ID=prot_Ecto-sp13_S_contig18281.5669.1|Name=mRNA_Ecto-sp13_S_contig18281.5669.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=231bp
MMVARSGVIAGDVEGCHSVIVEGTVIGNVSASVVVLRRYANVQGNVWCKD
LAAAATAVFRNRATESPVPSSSSSSHHHRRSSSTSSGVIGDAGSRSRGGS
GSGSGGRALTPPASSSGNRTTQPTPSPDSDRQVSSTTMAAMTADDSDMAR
RRRRRRRRVCRTPSRLPSPRRFPPQAAVAVRGVVQQGGTVLFRVAKGRRL
RRTLRHRRCWRRHRLRRRLLQTPSLRRRSW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007607BacA/B