mRNA_Ecto-sp13_S_contig1828.5667.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1828.5667.1 vs. uniprot
Match: A0A6H5JHQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ0_9PHAE) HSP 1 Score: 975 bits (2521), Expect = 0.000e+0 Identity = 702/998 (70.34%), Postives = 716/998 (71.74%), Query Frame = 3
Query: 219 TAATSVVRSPAARLLPRMGSSGTLGSRLSGGVGVGVGEGMIGRSRRESAILNALAKGSSLQEAVRDKGMGGGARSVSVGGDLSSLSTSSMIEAGEAAAGAGTMGSAAAEPAAAVMAAAGGLKISRTSSIDRVSSSPQLPHGSDVLLGAGVAGSLPMAEAADSGSGVQPGGMRVSSAPQVPAAAXXXXXXAGGLGG-----LVPKRNRRLDISGQNKFTPRKDYPPSSMLFQAMRTHYGNDYSSRDLPDTPAACWALVVSAQEARRGTRKLSTANYMQEQPATYDAETE----------------------------------------------------------------------------------------------------------------------------------------------GSWLKRGGGRGASVEVDGGELRGRDPSAASSAGNWDGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------GPHLRHDRHREVSAASLVSVSSVDEERGRETRRSGAARSTSAEMAPAPAPTVREEATVAGPEEVGGGAARAADKSVSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVVRTTGWSEDDPYVAPVGDLPGQQKGFVGAEPHQWEAGKRAHEQQRGXXXXXXGGSVSGDLYPAAARDLLMAGAAXXXXXXXXXX------------------EGLEKVRTRSRSHSMHMGDVGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKEASFRLPLSQAKDKEDYGSFEGYEDGAGVYVQYAVANQQGAARAPPHTSSASNIAGLDIVVGSQVPDGNGSXXXXXXXXXXATGERFQPMGYLGRSAKRSLTPSMNYNQVSTGWSDFAEAIDAKHVDDGAGGFSDLVSGVAGGDGQFGGGRGGLSGWDFDPPDSVPAGFTTLRGGGXXXXXXXXXSSYRPGTMKHARSAGSISTSALGWQTDGAGAK 2696
TAATSVVRSPAARLLPRMGSSGTLGS L GGVGVGVGEG+IGRSRRESAILNALAKGSSLQEAVRDKG+GG ARSVSVGGDLSSLS SSMIEAGEAA GAG MGSAAAEPAA VM AAGGLK + TSSIDRVSSSPQLPHGSDVLLGAG AGSLPMAEAADSGSG QP GMRVSSAPQ XXXXXX LVPKRNRRLDISGQNKFTPRKDYPPSSMLFQAMRTHYGNDYSSRDLPDTPAACWALVVSAQEARRGTRKLSTA YM EQPATYDAE+ GSWLK G E RGR PSAAS XXXXXXXXXXXXXXXXXXXXXXXXXXXXX GP LRH+RHREVS ASLVSVSSVDE R PTVREEATV GP+EVGGGAAR ADKS ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGV+RTTGWSEDD YVAPVGDLPGQQKGFVGAEP QWEAGKRAHEQQRGXXXXXXGGSVSGDLYPAAARDLLMAGAAXXXXXXXXXX EGLEKVRTRSRSHSMHMGDVGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKEA PLSQ KDKEDYGSFEGYEDGAGVYVQYAVANQQGAA+APPHTSSASNIA LDIV+GSQ PDGN XXXXXXX ATG+RFQPMGY GRSAKRSLTPSMNYNQVST WSDFAEAIDAKHVDDGAGGFSDLVSG AGG+GQFGGGRGGL+ WDFDPPDSVPAGFTTL GGG S YRPGTMKHARSAGSISTSALGWQTDG GAK
Sbjct: 471 TAATSVVRSPAARLLPRMGSSGTLGSGLRGGVGVGVGEGVIGRSRRESAILNALAKGSSLQEAVRDKGLGGAARSVSVGGDLSSLSASSMIEAGEAATGAGAMGSAAAEPAAGVMRAAGGLKKTGTSSIDRVSSSPQLPHGSDVLLGAGAAGSLPMAEAADSGSGAQPRGMRVSSAPQXXXXXXXXXXXXXXXXXXXXXXLVPKRNRRLDISGQNKFTPRKDYPPSSMLFQAMRTHYGNDYSSRDLPDTPAACWALVVSAQEARRGTRKLSTAKYMHEQPATYDAESTMAPPSPSAGQWRTPNGGSGSAXXXXXXXXXXXXGAGAATGGGDEDRGGLFGPGFRPALASQSSTGSISGXXXXXXXXXXXXXXXXXTRPLSLPVGARDGDIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSWLKHGXXXXXXXXXXXXEPRGRYPSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPPLRHNRHREVSEASLVSVSSVDEGRXXXXXXXXXXXXXXXXXXXXXXPTVREEATVVGPKEVGGGAARVADKS-ALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVMRTTGWSEDDAYVAPVGDLPGQQKGFVGAEPRQWEAGKRAHEQQRGXXXXXXGGSVSGDLYPAAARDLLMAGAAXXXXXXXXXXGXXXXXXXXXXXXXGGGREGLEKVRTRSRSHSMHMGDVGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKEAIVG-PLSQVKDKEDYGSFEGYEDGAGVYVQYAVANQQGAAKAPPHTSSASNIADLDIVMGSQFPDGNSGXXXXXXX---ATGDRFQPMGYQGRSAKRSLTPSMNYNQVSTAWSDFAEAIDAKHVDDGAGGFSDLVSGAAGGNGQFGGGRGGLNDWDFDPPDSVPAGFTTLSGGG---------SGYRPGTMKHARSAGSISTSALGWQTDGTGAK 1454
BLAST of mRNA_Ecto-sp13_S_contig1828.5667.1 vs. uniprot
Match: D7G2K1_ECTSI (Alpha,alpha-trehalose-phosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K1_ECTSI) HSP 1 Score: 934 bits (2415), Expect = 0.000e+0 Identity = 614/730 (84.11%), Postives = 625/730 (85.62%), Query Frame = 3
Query: 201 EGAAVPTAATSVVRSPAARLLPRMGSSGTLGSRLSGGVGVGVGEGMIGRSRRESAILNALAKGSSLQEAVRDKGMGGGARSVSVGGDLSSLSTSSMIEAGEAAAGAGTMGSAAAEPAAAVMAAAGGLKISRTSSIDRVSSSPQLPHGSDVLLGAGVAGSLPMAEAADSGSGVQPGGMRVSSAPQVPAAAXXXXXXAGGLGGLVPKRNRRLDISGQNKFTPRKDYPPSSMLFQAMRTHYGNDYSSRDLPDTPAACWALVVSAQEARRGTRKLSTANYMQEQPATYDAETEGSWLKRGGGRGASVEVDGGELRGRDPSAASSAGNWDGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GPHLRHDRHREVSAASLVSVSSVDEERGRETRRSGAARSTSAEMAPAPAPTVREEATVAGPEEVGGGAARAADKSVSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG--VVRTTGWSEDDPYVAPVGDLPGQQKGFVGAEPHQWEAGKRAHEQQRGXXXXXXGGSVSGDLYPAAARDLLMAGAAXXXXXXXXXXEGLEKVRTRSRSHSMHMGDVGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKEASFRLPLSQAKDKEDYGSFEGYEDGAGVYVQYAVANQQGAARAPPHTSSASNIAGLDIVVGSQVPDGNGSXXXXXXXXXXATGERFQPMGYLGRSAKRSLTPSMNYNQVS 2378
+GAAVPTAA SVVRSPAARLLPRM SSGTLGS L GGVGV VGEG+IGRSRRESAILNALAKGSSLQEAVRDKG+GGG RSVSVGGDLSSLS SSMIEAGEAAA AAGGLK SRTSSIDRVSSSPQLPHG DVLLGAG AGSLPMAEAADSGS QPGGMRVSSAPQVPAAA AGGLGGLVPKRNRRLDISGQNKFTPRKDYPPSSMLFQAMRTHYGNDYSSRDLPDTPAACWALVVSAQEARRGTRKLSTANYMQEQPATYDAETEGS K GGGRG VE GGE RGRDPSAASSAGNWDG XXXXXXXXXXXXXXXXXXXXXXXXXXXXX GP LRHDRHREVSAASL SVSSVDEERGRE RSGAARSTSAEMAPA APTVREEA++AGPEEVGG XXXXXXXXXXXXXXXXXXXXXXX XXX VV+TTGWS DDPYVAPVGDLPGQQKGFVGAEP QWEAGKRAHEQQRGXXXXXXGGSVSGDLYPAAARDLLMAG A EGLEKVRTRSRSHSMHMGD+GVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKE LSQ KDKEDYGSFEGYEDGAGVYVQYAVANQQGAA+APPHTSSASNIA LDIV+GSQ PDGN XXXXXXXX ATG+RFQPMGYLGRSAKRSLTPSMNYNQ +
Sbjct: 57 QGAAVPTAAVSVVRSPAARLLPRMSSSGTLGSGLRGGVGVDVGEGVIGRSRRESAILNALAKGSSLQEAVRDKGLGGGTRSVSVGGDLSSLSASSMIEAGEAAAXXXXXXXXXXXXXXXXXXAAGGLKKSRTSSIDRVSSSPQLPHGPDVLLGAGAAGSLPMAEAADSGSVAQPGGMRVSSAPQVPAAAAAGSS-AGGLGGLVPKRNRRLDISGQNKFTPRKDYPPSSMLFQAMRTHYGNDYSSRDLPDTPAACWALVVSAQEARRGTRKLSTANYMQEQPATYDAETEGSRGKHGGGRGEGVEGGGGEPRGRDPSAASSAGNWDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPPLRHDRHREVSAASLGSVSSVDEERGRERGRSGAARSTSAEMAPALAPTVREEASIAGPEEVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPRMPQGDXXXXXXXVVKTTGWSGDDPYVAPVGDLPGQQKGFVGAEPRQWEAGKRAHEQQRGXXXXXXGGSVSGDLYPAAARDLLMAGPAGGVGAGGGGREGLEKVRTRSRSHSMHMGDIGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKE------LSQVKDKEDYGSFEGYEDGAGVYVQYAVANQQGAAKAPPHTSSASNIADLDIVMGSQFPDGNSGXXXXXXXX--ATGDRFQPMGYLGRSAKRSLTPSMNYNQYT 777
BLAST of mRNA_Ecto-sp13_S_contig1828.5667.1 vs. uniprot
Match: K3WI94_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WI94_GLOUD) HSP 1 Score: 78.2 bits (191), Expect = 1.020e-10 Identity = 31/57 (54.39%), Postives = 46/57 (80.70%), Query Frame = 3
Query: 807 VPKRNRRLDISGQNKFTPRKDYPPSSMLFQAMRTHYGNDYSSRDLPDTPAACWALVV 977
+P RR +I+ ++KFTPR+D+PPS+ L++AM++ YG+++ LPDTPAACWALVV
Sbjct: 708 IPSNARRDEITERSKFTPRRDFPPSAALYKAMKSKYGDNFGMHALPDTPAACWALVV 764
BLAST of mRNA_Ecto-sp13_S_contig1828.5667.1 vs. uniprot
Match: A0A329SM09_9STRA (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A n=13 Tax=Phytophthora TaxID=4783 RepID=A0A329SM09_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 4.510e-10 Identity = 32/55 (58.18%), Postives = 43/55 (78.18%), Query Frame = 3
Query: 810 PKRNRRLDISGQNKFTPRKDYPPSSMLFQAMRTHYGNDYSSRDLPDTPAACWALV 974
P RR +I+ ++KFTPR+D+PPS+ LF+AMR YG+++ LPDTPAACWALV
Sbjct: 1009 PSNARRDEITEKSKFTPRRDFPPSAALFKAMRVKYGDNFGIHRLPDTPAACWALV 1063
BLAST of mRNA_Ecto-sp13_S_contig1828.5667.1 vs. uniprot
Match: H3GTK8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTK8_PHYRM) HSP 1 Score: 75.1 bits (183), Expect = 9.980e-10 Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = 3
Query: 810 PKRNRRLDISGQNKFTPRKDYPPSSMLFQAMRTHYGNDYSSRDLPDTPAACWALV 974
P RR +I+ ++KFTPR+D+PPS+ LF+AM+ YG+++ LPDTPAACWALV
Sbjct: 934 PSNARRDEITEKSKFTPRRDFPPSAALFKAMKVKYGDNFGIHRLPDTPAACWALV 988
BLAST of mRNA_Ecto-sp13_S_contig1828.5667.1 vs. uniprot
Match: A0A6A3MPS8_9STRA (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MPS8_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.030e-9 Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = 3
Query: 810 PKRNRRLDISGQNKFTPRKDYPPSSMLFQAMRTHYGNDYSSRDLPDTPAACWALV 974
P RR +I+ ++KFTPR+D+PPS+ LF+AM+ YG+++ LPDTPAACWALV
Sbjct: 1024 PSNARRDEITEKSKFTPRRDFPPSAALFKAMKVKYGDNFGIHRLPDTPAACWALV 1078
BLAST of mRNA_Ecto-sp13_S_contig1828.5667.1 vs. uniprot
Match: A0A662XC19_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XC19_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.060e-9 Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = 3
Query: 810 PKRNRRLDISGQNKFTPRKDYPPSSMLFQAMRTHYGNDYSSRDLPDTPAACWALV 974
P RR +I+ ++KFTPR+D+PPS+ LF+AM+ YG+++ LPDTPAACWALV
Sbjct: 1153 PSNARRDEITEKSKFTPRRDFPPSAALFKAMKVKYGDNFGIHRLPDTPAACWALV 1207
BLAST of mRNA_Ecto-sp13_S_contig1828.5667.1 vs. uniprot
Match: A0A7S3XLJ3_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLJ3_HETAK) HSP 1 Score: 73.2 bits (178), Expect = 1.230e-9 Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 3
Query: 813 KRNRRLDISGQNKFTPRKDYPPSSMLFQAMRTHYGNDYSSRDLPDTPAACWALVVS-AQEARRGTRKLSTAN 1025
K R+ DI+G+ KF PR D+PP+ +L+QAM+ YG + S+ +LP+TPAACWALV + R R ST++
Sbjct: 156 KTPRQTDITGRKKFEPRMDFPPAGILYQAMKRKYGPNVSNFELPETPAACWALVYTMVPSLRHVVRTESTSS 227
BLAST of mRNA_Ecto-sp13_S_contig1828.5667.1 vs. uniprot
Match: A0A8J2X0D0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X0D0_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 3.110e-9 Identity = 33/72 (45.83%), Postives = 47/72 (65.28%), Query Frame = 3
Query: 822 RRLDISGQNKFTPRKDYPPSSMLFQAMRTHYGNDYSSRDLPDTPAACWALVVSAQEARRGTRKLSTANYMQE 1037
RR D+ + +F PR+D+PPS+MLFQAMR YG D+S DLP + +ACWALV + R G + + ++ E
Sbjct: 1012 RRADLVARREFNPRRDFPPSAMLFQAMRRRYGRDWSRVDLPTSASACWALV-GGRTPRPGAPRAERSTFLAE 1082
BLAST of mRNA_Ecto-sp13_S_contig1828.5667.1 vs. uniprot
Match: A0A0P1A8Y1_PLAHL (-trehalose-phosphate synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8Y1_PLAHL) HSP 1 Score: 71.2 bits (173), Expect = 1.510e-8 Identity = 29/50 (58.00%), Postives = 41/50 (82.00%), Query Frame = 3
Query: 825 RLDISGQNKFTPRKDYPPSSMLFQAMRTHYGNDYSSRDLPDTPAACWALV 974
R +I+ ++KFTPR+D+PPS+ LF+AM+ YG+++ LPDTPAACWALV
Sbjct: 1017 RDEITEKSKFTPRRDFPPSAALFKAMKVKYGDNFGLHRLPDTPAACWALV 1066 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1828.5667.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1828.5667.1 >prot_Ecto-sp13_S_contig1828.5667.1 ID=prot_Ecto-sp13_S_contig1828.5667.1|Name=mRNA_Ecto-sp13_S_contig1828.5667.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=810bp MGSSGTLGSRLSGGVGVGVGEGMIGRSRRESAILNALAKGSSLQEAVRDKback to top mRNA from alignment at Ecto-sp13_S_contig1828:4871..14209- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1828.5667.1 ID=mRNA_Ecto-sp13_S_contig1828.5667.1|Name=mRNA_Ecto-sp13_S_contig1828.5667.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9339bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1828:4871..14209- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1828:4871..14209- >mRNA_Ecto-sp13_S_contig1828.5667.1 ID=mRNA_Ecto-sp13_S_contig1828.5667.1|Name=mRNA_Ecto-sp13_S_contig1828.5667.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2430bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1828:4871..14209- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |