mRNA_Ecto-sp13_S_contig1825.5655.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1825.5655.1 vs. uniprot
Match: D7FVW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW2_ECTSI) HSP 1 Score: 393 bits (1009), Expect = 1.600e-136 Identity = 199/206 (96.60%), Postives = 202/206 (98.06%), Query Frame = 3
Query: 126 MTRPERRALKDKVALEKGRLMQRAGQAAKMNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHERTVQINENRRQLRVEREEKRWEDMEKKEGDDEQRWNWLRDEGEKSKKNKSGVPYNMISLRYNDGLDGDRLEYADNITKHRAQVRSNNLTRLGDSRCGYNILTGQPREEILDPPVPKPSDAVAHWSHHQGG 743
MTRPERRALKDKVALEKGRLMQRAGQAAKMNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHER VQIN+NRRQLRVERE KRWEDMEKKEGDDEQRWN LRDEGEKSKKNKSGVPYNMISLRYNDGLDGDRLEYADN+TKHRAQVRSNNLTRLGDSRCGYNILTGQPREEI+DPPVPKPSDAVA WSHHQGG
Sbjct: 1 MTRPERRALKDKVALEKGRLMQRAGQAAKMNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHERKVQINDNRRQLRVEREGKRWEDMEKKEGDDEQRWNRLRDEGEKSKKNKSGVPYNMISLRYNDGLDGDRLEYADNVTKHRAQVRSNNLTRLGDSRCGYNILTGQPREEIVDPPVPKPSDAVALWSHHQGG 206
BLAST of mRNA_Ecto-sp13_S_contig1825.5655.1 vs. uniprot
Match: A0A7S2XXX1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXX1_9STRA) HSP 1 Score: 213 bits (541), Expect = 5.930e-65 Identity = 114/191 (59.69%), Postives = 140/191 (73.30%), Query Frame = 3
Query: 105 GFRNIKPMTRPERRALKDKVALEKGRLMQRAGQAAKMNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHERTVQINENRRQLRVEREEKRWEDMEKKEGDDEQRWNWLRDEGEKSKKNKSGVPYNMISLRYNDGLDGDRLEYADNITKHRAQVRSNNLTRLGDSRCGYNILTGQPREE 677
GFRNIKP+TR ER A KDKVALEK RLM RAG AK+ R+N P EGV L PDAAGFI+DADRFHSDT GEE LRR+A+ R V+ E RR ++REE+RW+ ++ + DE++WN +R+ KSKKNKS VPYN I+L+YNDG DG+RL D T+ RA +R N+ R GD+RCGYNILTG+ R E
Sbjct: 24 GFRNIKPLTRAERGAQKDKVALEKARLMNRAGHQAKIYRENAPVEGVGLLGLPPDAAGFISDADRFHSDTSGEELLRRQAEQARKVEFYEKRRAKNIDREEERWQKIKDDKIADEEKWNRMREMEVKSKKNKSAVPYNAITLQYNDGHDGERLRQEDQRTRDRAHMRQQNMARHGDTRCGYNILTGEARSE 214
BLAST of mRNA_Ecto-sp13_S_contig1825.5655.1 vs. uniprot
Match: A0A835Z1N9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N9_9STRA) HSP 1 Score: 200 bits (508), Expect = 2.180e-60 Identity = 116/212 (54.72%), Postives = 138/212 (65.09%), Query Frame = 3
Query: 126 MTRPERRALKDKVALEKGRLMQRAGQAAKMNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHERTVQINENRRQLRVEREEKRWEDMEKKEGDDEQRWNWLRDEGEKSKKNKSGVPYNMISLRYNDGLDGDRLEYADNITKHRAQVRSNNLTRLGDSRCGYNILTGQPREEILDPPVPKPSDAVA---------HWSHH 734
MTR E+ A KDKVALEK RL RAG+AA+ RDNLPPEGVSLTE P AAGFIADADRFH+D VGEE +RR A+HER QI ++RR+ + +REE RW +M EG K+KKN SG+PY+MISL Y G DG RL + D +T+HRA +RSN L+RLGD R GYNI++G P DPP P A A HW H
Sbjct: 1 MTRAEQLATKDKVALEKQRLFNRAGRAAREYRDNLPPEGVSLTEAHPGAAGFIADADRFHTDVVGEELVRRTAEHERRQQIVDHRRRQKQDREENRWTEMRXXXXXXXXXXXXXXXEGVKAKKNASGIPYDMISLTYRKGADGARLRHDDALTQHRAALRSNQLSRLGDGRSGYNIISGAPCAPRADPPRPLSQAAPAXXXXXXXGAHWMAH 212
BLAST of mRNA_Ecto-sp13_S_contig1825.5655.1 vs. uniprot
Match: A0A8J2S6E6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6E6_9STRA) HSP 1 Score: 180 bits (456), Expect = 2.630e-52 Identity = 99/209 (47.37%), Postives = 144/209 (68.90%), Query Frame = 3
Query: 93 ESAFGFRNIKPMTRPERRALKDKVALEKGRLMQRAGQAAKMNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHERTVQINENRRQLRVEREEKRWEDMEKKEGDDEQRWNWLRDEGEKSKKNKSGVPYNMISLRYNDGLDGDRLEYADNITKHRAQVRSNNLTRLGDSRCGYNILTGQPREEILDPPVPKPSDAVA 719
+SA GFRNI PMTR ERR+ +DKVALEK RLM+R G AA+M+R+N P L +AAGF +DADRFH+D GEE L+R+A++ER +R+ RV++EE+RW +++++ ++ W+ R+ G K KKNKS VPY+ ++L+Y GLDG+RL D+ ++RA +RS NL G+SRCGY+IL G+ + ++ P P+P +A
Sbjct: 10 KSANGFRNILPMTRSERRSQRDKVALEKDRLMKRTGLAARMHRENAPRTSDGLVVPEANAAGFCSDADRFHTDVAGEEFLKRRARYEREQTNYATKREGRVKQEEQRWAALQEEKQQEDAYWSNQREIGVKDKKNKSSVPYDALTLQYAPGLDGERLRLHDDKIRYRAALRSRNLQTKGESRCGYDILNGRDKPDLRLPEEPQPQRELA 218
BLAST of mRNA_Ecto-sp13_S_contig1825.5655.1 vs. uniprot
Match: A0A7S4ECF0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECF0_9STRA) HSP 1 Score: 177 bits (450), Expect = 4.920e-51 Identity = 101/215 (46.98%), Postives = 142/215 (66.05%), Query Frame = 3
Query: 75 PTMELPESAFGFRNIKPMTRPERRALKDKVALEKGRLMQRAGQAAKMNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHERTVQINENRRQLRVEREEKRWEDMEKKEGDDEQRWNWLRDEGEKSKKNKSGVPYNMISLRYNDGLDGDRLEYADNITKHRAQVRSNNLTRLGDSRCGYNILTGQPREEILDPPVPKPSDAVA 719
P + ++ FRNIKP TR ER AL+DKVALEK RLM+R G AAKM R+N P L PDAAGF+AD+DRFH+D GE+ LRR A+ ++ E+ R R + EE+RW +++++ ++E W R G K+K+N S VP++M++L+Y+D LDG+RL Y D+ ++RA VRS+NL + G SR GY+ILTG + P P+ S A+A
Sbjct: 22 PILAASPTSSPFRNIKPKTRQERAALRDKVALEKDRLMKRTGLAAKMYRENAPDTSDGLVVPRPDAAGFMADSDRFHTDVAGEDKLRRDAKIKQDYLRREHTRLERAKAEEQRWARIQQEKANEEANWLAERQAGIKAKRNASSVPFDMVTLQYHDSLDGERLRYHDDKVRYRAAVRSSNLLKNGGSRAGYDILTGGDVRGLQKPSYPQASGALA 236
BLAST of mRNA_Ecto-sp13_S_contig1825.5655.1 vs. uniprot
Match: A0A067C5C9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C5C9_SAPPC) HSP 1 Score: 139 bits (349), Expect = 8.300e-37 Identity = 79/191 (41.36%), Postives = 125/191 (65.45%), Query Frame = 3
Query: 108 FRNIKPMTRPERRALKDKVALEKGRLMQRAGQAAKMNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHERTVQINENRRQLRVEREEKRWEDMEKKEGDDEQRWNWLRDEGEKSKKNKSGVPYNMISLRYNDGLDGDRLEYADNITKHRAQVRSNNLTRLGDSRCGYNILTGQPREEI 680
F+NI TR ER+A++DK LEK RL R +++ G ++T P + GF++DADRFH+D GEE + R+++H + + +++R+ RE++RW+ M+ K +++QRW+ LRD+G K+++NK+ YN+++L+YNDG DG+RL ADN +HRA VR+ NL + +SR G N +TG P I
Sbjct: 3 FKNISARTRDERKAVRDKETLEKDRLKARKEGFIRVDTSI---SGSAMTVQAPGSQGFMSDADRFHTDVAGEEKVLRESRHAKHQLVYDHKRRDNQLREDQRWKTMDAKAAEEKQRWDRLRDDGGKARRNKASCDYNLVTLKYNDGKDGERLMKADNEIRHRATVRAANL-QFQNSRAGINPITGDPIARI 189
BLAST of mRNA_Ecto-sp13_S_contig1825.5655.1 vs. uniprot
Match: A0A1W0A626_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A626_9STRA) HSP 1 Score: 137 bits (344), Expect = 4.480e-36 Identity = 78/193 (40.41%), Postives = 123/193 (63.73%), Query Frame = 3
Query: 102 FGFRNIKPMTRPERRALKDKVALEKGRLMQRAGQAAKMNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHERTVQINENRRQLRVEREEKRWEDMEKKEGDDEQRWNWLRDEGEKSKKNKSGVPYNMISLRYNDGLDGDRLEYADNITKHRAQVRSNNLTRLGDSRCGYNILTGQPREEI 680
F+NI TR ER+A++DK EK RL R +++ G ++T P + GF++DADRFH+D GEE + R+++ + + +N+RQ REE+RW+ M+ K ++ QRW+ +R++G K+++NKS +N+++L+YNDG DGDRL+ AD+ +HRA VR+ NL + +SR G N +TG P I
Sbjct: 1 MSFKNINARTRDERKAVRDKETWEKDRLKARKEGYVRIDTSI---SGSAMTVQAPGSQGFMSDADRFHTDVAGEEKVVRESRMAKHQMVYDNKRQNNQIREEQRWKTMDAKAAEERQRWDRMREDGGKARRNKSSCEFNLVTLKYNDGKDGDRLKKADSEIRHRATVRAANL-QFQNSRAGINPITGDPIARI 189
BLAST of mRNA_Ecto-sp13_S_contig1825.5655.1 vs. uniprot
Match: A0A1V9YB29_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YB29_9STRA) HSP 1 Score: 132 bits (332), Expect = 2.800e-34 Identity = 76/187 (40.64%), Postives = 122/187 (65.24%), Query Frame = 3
Query: 108 FRNIKPMTRPERRALKDKVALEKGRLMQRAGQAAKMNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHERTVQINENRRQLRVEREEKRWEDMEKKEGDDEQRWNWLRDEGEKSKKNKSGVPYNMISLRYNDGLDGDRLEYADNITKHRAQVRSNNLTRLGDSRCGYNILTGQP 668
F+NI TR ER+A++DK EK RL R +++ G ++TE + G+++DADRFH+D GEE + R+++ + + +++RQ REE+RW+ M+ K +++QRW+ LRD+G K+++NKS +N+++L+YNDG DG+RL AD+ +HRA VR+ NL + +SR G N +TG P
Sbjct: 3 FKNINARTRDERKAVRDKETWEKDRLRARKEGFIRVDTSI---SGAAMTEQAHGSQGYMSDADRFHTDVAGEEKVARESRTAKHQLVYDHKRQNNQLREEQRWKAMDAKSAEEKQRWDRLRDDGGKARRNKSSCDFNLVTLKYNDGKDGERLMKADSEIRHRAAVRAANL-QFQNSRAGINPITGDP 185
BLAST of mRNA_Ecto-sp13_S_contig1825.5655.1 vs. uniprot
Match: A0A5D6XHU2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHU2_9STRA) HSP 1 Score: 129 bits (324), Expect = 5.390e-33 Identity = 83/192 (43.23%), Postives = 110/192 (57.29%), Query Frame = 3
Query: 105 GFRNIKPMTRPERRALKDKVALEKGRLMQRAGQAAKMNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHERTVQINENRRQLRVEREEKRWEDMEKKEGDDEQRWNWLRDEGEKSKKNKSGVPYNMISLRYNDGLDGDRLEYADNITKHRAQVRSNNLTRLGDSRCGYNILTGQPREEI 680
F NI TR +R AL+DK EK RL QR +++ G ++ + GF++DADRFHSDT GEE R+ +H RT E RR V+RE RW+DM+ +EQRW LR G K+ +NK G +N ++L+Y+DG DG RL AD KHRA VR+ NL +SR G N +TG+P I
Sbjct: 3 AFNNIPACTREQRGALQDKEQREKERLRQRKEGFVRVDTS---AAGSAMIVYAATSQGFMSDADRFHSDTAGEERAHREERHARTQSQLERRRYNSVQREVARWKDMDAAGAAEEQRWRTLRQSGTKALRNKCGEAFNPVTLQYSDGKDGQRLRAADQAVKHRAVVRAQNLQHH-NSREGINPITGEPVRRI 190
BLAST of mRNA_Ecto-sp13_S_contig1825.5655.1 vs. uniprot
Match: A0A7S3HCK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCK9_9STRA) HSP 1 Score: 127 bits (320), Expect = 6.610e-33 Identity = 69/139 (49.64%), Postives = 96/139 (69.06%), Query Frame = 3
Query: 87 LPESAFGFRNIKPMTRPERRALKDKVALEKGRLMQRAGQAAKMNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHERTVQINENRRQLRVEREEKRWEDMEKKEGDDEQRWNWLRDEGEKSKKNKS 503
+P SA+GFR+I+P TR ERR KDKVALEK R+ QR G A+M++ N P LT CT DA G++++ADRFH+DTVGEE+ R+ +R Q NE RR +R+E RW E+K+ +++ W LR++G K+KKN+S
Sbjct: 20 VPPSAYGFRSIRPKTRAERRGQKDKVALEKNRINQRVGWQARMHQQNAPETSALLTSCTQDAVGYLSNADRFHTDTVGEEYALRQQALQRRYQANEYRRNQSFKRDEDRWNQNEEKQQKEDEAWRKLREDGSKAKKNQS 158 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1825.5655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1825.5655.1 >prot_Ecto-sp13_S_contig1825.5655.1 ID=prot_Ecto-sp13_S_contig1825.5655.1|Name=mRNA_Ecto-sp13_S_contig1825.5655.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=223bp MELPESAFGFRNIKPMTRPERRALKDKVALEKGRLMQRAGQAAKMNRDNLback to top mRNA from alignment at Ecto-sp13_S_contig1825:6842..10450+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1825.5655.1 ID=mRNA_Ecto-sp13_S_contig1825.5655.1|Name=mRNA_Ecto-sp13_S_contig1825.5655.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3609bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1825:6842..10450+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1825:6842..10450+ >mRNA_Ecto-sp13_S_contig1825.5655.1 ID=mRNA_Ecto-sp13_S_contig1825.5655.1|Name=mRNA_Ecto-sp13_S_contig1825.5655.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=669bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1825:6842..10450+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |