prot_Ecto-sp13_S_contig18248.5653.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18248.5653.1
Unique Nameprot_Ecto-sp13_S_contig18248.5653.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length53
Homology
BLAST of mRNA_Ecto-sp13_S_contig18248.5653.1 vs. uniprot
Match: D7FU83_ECTSI (Protoporphyrinogen oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU83_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 1.090e-21
Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 IVPEAARLDEVYYPPVASVTLAYPKSSFKVDLTGFGNLIPRKMKIRSVAWLLS 53
            IVPEAARLDEVYYPPVASVTLAYPKSSFKVDLTGFGNLIPRKMKIR++  + S
Sbjct:  359 IVPEAARLDEVYYPPVASVTLAYPKSSFKVDLTGFGNLIPRKMKIRTLGTIWS 411          
BLAST of mRNA_Ecto-sp13_S_contig18248.5653.1 vs. uniprot
Match: W7TSK2_9STRA (Protoporphyrinogen oxidase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSK2_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.960e-15
Identity = 37/53 (69.81%), Postives = 45/53 (84.91%), Query Frame = 0
Query:    1 IVPEAARLDEVYYPPVASVTLAYPKSSFKVDLTGFGNLIPRKMKIRSVAWLLS 53
            +VPEAARL +VYYPPVASVTLAYPK++F+  L GFGNLIPR MKIR++  + S
Sbjct:  476 LVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIRTLGTIWS 528          
BLAST of mRNA_Ecto-sp13_S_contig18248.5653.1 vs. uniprot
Match: A0A836C8C9_9STRA (Protoporphyrinogen oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C9_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.640e-15
Identity = 35/53 (66.04%), Postives = 45/53 (84.91%), Query Frame = 0
Query:    1 IVPEAARLDEVYYPPVASVTLAYPKSSFKVDLTGFGNLIPRKMKIRSVAWLLS 53
            +VPEAA+L+ VYYPPVASVTLAYPK +F+  L GFG+LIPRKMK+R++  + S
Sbjct:  309 LVPEAAQLENVYYPPVASVTLAYPKEAFRAPLVGFGHLIPRKMKVRTLGTIWS 361          
BLAST of mRNA_Ecto-sp13_S_contig18248.5653.1 vs. uniprot
Match: A0A4D9DG57_9STRA (Protoporphyrinogen oxidase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DG57_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 3.660e-15
Identity = 36/48 (75.00%), Postives = 43/48 (89.58%), Query Frame = 0
Query:    1 IVPEAARLDEVYYPPVASVTLAYPKSSFKVDLTGFGNLIPRKMKIRSV 48
            +VPEAARL +VYYPPVASVTLAYPK++F+  L GFGNLIPR MKIR++
Sbjct:  381 LVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIRTL 428          
BLAST of mRNA_Ecto-sp13_S_contig18248.5653.1 vs. uniprot
Match: A0A7S2Y0E6_9STRA (Protoporphyrinogen oxidase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E6_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.500e-12
Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    1 IVPEAARLDEVYYPPVASVTLAYPKSSFKVDLTGFGNLIPRKMKIRSVAWLLS 53
            +VPEA  L++VYYPPVASVTLAYP   F+  L GFGNLIPR  KIR++  + S
Sbjct:  344 VVPEAEALNKVYYPPVASVTLAYPIEEFERPLVGFGNLIPRSQKIRTLGTIWS 396          
BLAST of mRNA_Ecto-sp13_S_contig18248.5653.1 vs. uniprot
Match: A0A7S0XB76_9STRA (Protoporphyrinogen oxidase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XB76_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 8.920e-12
Identity = 30/53 (56.60%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    1 IVPEAARLDEVYYPPVASVTLAYPKSSFKVDLTGFGNLIPRKMKIRSVAWLLS 53
            ++PE + L+E+ YPPVASVT+AYP  +FK  L GFGNLIPR MK+R++  + S
Sbjct:  295 LIPEISLLNEINYPPVASVTVAYPNEAFKEPLVGFGNLIPRAMKVRTLGTIWS 347          
BLAST of mRNA_Ecto-sp13_S_contig18248.5653.1 vs. uniprot
Match: A0A7S3NJ18_9STRA (Protoporphyrinogen oxidase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJ18_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 4.260e-11
Identity = 33/50 (66.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    5 AARLDEVYYPPVASVTLAYPKSSFKV-DLTGFGNLIPRKMKIRSVAWLLS 53
            A  LD+VYYPPVASVT+AYPKSSFK+ DL GFGNL PR   IR++  + S
Sbjct:  363 ATALDKVYYPPVASVTVAYPKSSFKMPDLPGFGNLNPRSQNIRTLGTIWS 412          
BLAST of mRNA_Ecto-sp13_S_contig18248.5653.1 vs. uniprot
Match: A0A2V3IR78_9FLOR (Protoporphyrinogen oxidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR78_9FLOR)

HSP 1 Score: 65.1 bits (157), Expect = 5.820e-11
Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    1 IVPEAARLDEVYYPPVASVTLAYPKSSFKVDLTGFGNLIPRKMKIRSVAWLLS 53
            + P  + L++VYYPPV SV+LAYPKS FK  L GFGNLIPRK+ IR++  + S
Sbjct:  311 LAPGISALEKVYYPPVWSVSLAYPKSEFKEPLRGFGNLIPRKLGIRTLGTIWS 363          
BLAST of mRNA_Ecto-sp13_S_contig18248.5653.1 vs. uniprot
Match: A0A1L3A3P4_9EUGL (Protoporphyrinogen oxidase (Fragment) n=1 Tax=Euglenaformis proxima TaxID=299110 RepID=A0A1L3A3P4_9EUGL)

HSP 1 Score: 65.1 bits (157), Expect = 5.830e-11
Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 0
Query:    1 IVPEAARLDEVYYPPVASVTLAYPKSSFKV--------DLTGFGNLIPRKMKIRSVAWLLS 53
            +VP AA LD+VY PPVASVT+AYPK SFK          L GFG+L+PR MK+RS+  + S
Sbjct:  350 LVPAAAALDQVYAPPVASVTMAYPKESFKELPGAQPGKPLVGFGHLLPRSMKVRSLGTIWS 410          
BLAST of mRNA_Ecto-sp13_S_contig18248.5653.1 vs. uniprot
Match: A0A1Z5JRE2_FISSO (Protoporphyrinogen oxidase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JRE2_FISSO)

HSP 1 Score: 64.3 bits (155), Expect = 1.090e-10
Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 0
Query:    1 IVPEAARLDEVYYPPVASVTLAYPKSSFKV--------DLTGFGNLIPRKMKIRSVAWLLS 53
            ++P AARL EVY PPVASVT+AYPK +FK          L GFG+L+PR MK+RS+  + S
Sbjct:  348 LIPAAARLSEVYSPPVASVTIAYPKEAFKELPGGTPEKPLRGFGHLLPRSMKVRSLGTIWS 408          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18248.5653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU83_ECTSI1.090e-2188.68Protoporphyrinogen oxidase n=2 Tax=Ectocarpus TaxI... [more]
W7TSK2_9STRA1.960e-1569.81Protoporphyrinogen oxidase n=2 Tax=Nannochloropsis... [more]
A0A836C8C9_9STRA2.640e-1566.04Protoporphyrinogen oxidase n=1 Tax=Tribonema minus... [more]
A0A4D9DG57_9STRA3.660e-1575.00Protoporphyrinogen oxidase n=1 Tax=Nannochloropsis... [more]
A0A7S2Y0E6_9STRA3.500e-1262.26Protoporphyrinogen oxidase n=1 Tax=Fibrocapsa japo... [more]
A0A7S0XB76_9STRA8.920e-1256.60Protoporphyrinogen oxidase n=1 Tax=Chromulina nebu... [more]
A0A7S3NJ18_9STRA4.260e-1166.00Protoporphyrinogen oxidase n=1 Tax=Aureoumbra lagu... [more]
A0A2V3IR78_9FLOR5.820e-1158.49Protoporphyrinogen oxidase n=1 Tax=Gracilariopsis ... [more]
A0A1L3A3P4_9EUGL5.830e-1155.74Protoporphyrinogen oxidase (Fragment) n=1 Tax=Eugl... [more]
A0A1Z5JRE2_FISSO1.090e-1054.10Protoporphyrinogen oxidase n=2 Tax=Fistulifera sol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.660.20coord: 13..51
e-value: 4.5E-9
score: 38.0
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 12..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18248contigEcto-sp13_S_contig18248:3244..3402 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18248.5653.1mRNA_Ecto-sp13_S_contig18248.5653.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18248 3244..3402 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18248.5653.1 ID=prot_Ecto-sp13_S_contig18248.5653.1|Name=mRNA_Ecto-sp13_S_contig18248.5653.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=53bp
IVPEAARLDEVYYPPVASVTLAYPKSSFKVDLTGFGNLIPRKMKIRSVAW
LLS
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