mRNA_Ecto-sp13_S_contig18241.5651.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: D8LCX3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCX3_ECTSI) HSP 1 Score: 283 bits (723), Expect = 7.820e-94 Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 1
Query: 1 SSKKEKNTETDILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIACEGEVRSLSFTPDGRFIAISMSGGGVEI 429
SSKKE+NTETDILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEY+INATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIACEGEVRSLSFTPDGRFIAISMSG GVEI
Sbjct: 126 SSKKERNTETDILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYLINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIACEGEVRSLSFTPDGRFIAISMSGVGVEI 268
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A1Y2GJE1_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GJE1_9FUNG) HSP 1 Score: 94.7 bits (234), Expect = 1.800e-20 Identity = 49/134 (36.57%), Postives = 76/134 (56.72%), Query Frame = 1
Query: 31 DILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIA-CEGEVRSLSFTPDGRFIAISMSGGGVEI 429
D++ D RT K K V F + ++ W+P G+ + T GSI V ++ + + + + AHTA C L DP RYLA+G D LV+LW+L+D++CVRT +R++SF+ DG FIA + ++I
Sbjct: 137 DLISFIDTRTFKVQKEVPFRVEVNEISWNPAGDLFLLTTGQGSIKVFSYPAMEEVYALE----AHTANCYCLEFDPRGRYLATGSADALVNLWDLEDYICVRTFGQLHWPIRTISFSFDGEFIASASEDFAIDI 266
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A7S1SU92_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SU92_9CHLO) HSP 1 Score: 90.9 bits (224), Expect = 1.370e-19 Identity = 45/135 (33.33%), Postives = 80/135 (59.26%), Query Frame = 1
Query: 31 DILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRT-IACEGEVRSLSFTPDGRFIAISMSGGGVEIV 432
D++ D+R K LKS K++ ++ W+ + + + T G+I+V+++ + + + ++ AHT+ C + DP +YLASGG D LVSLW+++D VC++T I + VR+L F+ D +A + +EIV
Sbjct: 58 DVISFLDIRKMKLLKSHKYSFEVNEICWNKSCDMFLLTTGNGTIEVLSYPTMENIQTLK----AHTSNCFCIGFDPAEKYLASGGADALVSLWDMEDLVCIQTFIRMDTPVRALDFSHDSTHLAFAAEDSPIEIV 188
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A1Y1ZAN0_9FUNG (WD40 repeat-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZAN0_9FUNG) HSP 1 Score: 91.3 bits (225), Expect = 3.300e-19 Identity = 47/124 (37.90%), Postives = 73/124 (58.87%), Query Frame = 1
Query: 31 DILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTI-ACEGEVRSLSFTPDGRFIA 399
D++ D + K K+ K + ++ W +G+Y T G + ++ F + KPL T A TA C L DP RYLA+GG D LV+LW+LD+FVCVR+ + + VR++SF+ DG+++A
Sbjct: 134 DLISFIDTKQFKIEKTSKHDVEVNEIAWDHSGDYFFLTTGQGHVKILEFPTLKPLH----TLDAQTANCYCLEFDPMGRYLAAGGADALVTLWDLDEFVCVRSFDSLDWPVRTISFSYDGQYLA 253
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A022QYR7_ERYGU (eIF2A domain-containing protein (Fragment) n=3 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QYR7_ERYGU) HSP 1 Score: 89.0 bits (219), Expect = 1.050e-18 Identity = 48/124 (38.71%), Postives = 70/124 (56.45%), Query Frame = 1
Query: 31 DILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIA-CEGEVRSLSFTPDGRFIA 399
D L I D+R K + KF ++ W+ G+ T G+++V+A+ P R +T +AHTA C +AIDP RY A G D LVSLW++++ +CVRT E VR++SF G +IA
Sbjct: 76 DELTILDVRKFKPIHKRKFNYEVNEIAWNTTGDKFFLTTGNGTVEVLAY----PSLRAVNTLMAHTAGCYCIAIDPVGRYFAVGSADSLVSLWDVNEMLCVRTFTKLEWPVRTISFNHTGEYIA 195
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A0C3RZW8_PHLGI (Uncharacterized protein n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3RZW8_PHLGI) HSP 1 Score: 86.7 bits (213), Expect = 2.760e-17 Identity = 45/110 (40.91%), Postives = 72/110 (65.45%), Query Frame = 1
Query: 112 WSPNGEYII-NATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIA-CEGEVRSLSFTPDGRFIAISMSGGGVEIVS 435
+S G+ I+ N +I VM F S KP+ T AH A C A+A+DP RYLASGG+D ++++++L++++C RTI C+ + LSF+ DG ++AIS +G ++IV+
Sbjct: 198 FSNAGDLIVTNNAMDHTIKVMEFPSLKPVH----TSAAHVAGCTAVALDPRGRYLASGGNDSIINMFDLEEWICARTITTCDHAITGLSFSYDGEYLAISNAGNYIDIVA 303
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A433PX61_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PX61_9FUNG) HSP 1 Score: 85.9 bits (211), Expect = 5.520e-17 Identity = 43/113 (38.05%), Postives = 69/113 (61.06%), Query Frame = 1
Query: 100 HDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIA-CEGEVRSLSFTPDGRFIAISMSGGGVEIVS 435
++ W+ +G+ T G+I + + S +PL ++ AHTA C L +DP RYLA+G D +VSLW+LD++VCVRT + VR++SF+ DG ++A + ++IVS
Sbjct: 188 NEITWNHSGDLFFLTTGQGTIKIFEYPSLRPLHTLQ----AHTANCYCLEVDPRGRYLATGSADAIVSLWDLDEWVCVRTFGKLDWPVRTISFSHDGEYLASASEDLVIDIVS 296
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A151ZBD7_9MYCE (WD40 repeat-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZBD7_9MYCE) HSP 1 Score: 85.9 bits (211), Expect = 7.850e-17 Identity = 47/136 (34.56%), Postives = 79/136 (58.09%), Query Frame = 1
Query: 31 DILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKL--AHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIA-CEGEVRSLSFTPDGRFIAISMSGGGVEI 429
DI+ IYD ++ K +K++KF +++ W P+GE I T +G+I+V + ++ ++ K+ AH+A L P +Y A G D LVS W+L++ C++T + VRS+SF+ DG+FIA + V+I
Sbjct: 248 DIINIYDAKSGKVMKNMKFNDEVNEFSWDPSGELFILTTGSGNIEVYRY--QVKINDLKFLKVFNAHSANIYCLDFHPSKKYFAVGSADSLVSFWDLEEMCCIKTFSKLVSPVRSISFSFDGQFIASTSEDNQVDI 381
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A7S2FPW6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FPW6_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 8.090e-17 Identity = 43/108 (39.81%), Postives = 65/108 (60.19%), Query Frame = 1
Query: 19 NTETDILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTI 342
+T D + I D+R + K+K KF +++ +SPN ++I TE G+++V F L VRS + AHT C L IDP +++A G D LVSLWE DD +C+R++
Sbjct: 26 DTAKDYISIIDVR-EHKIKKHKFPFEVNEFSFSPNSRHMILTTELGTVEVYKFIVGGNLKHVRSIQ-AHTDNCYTLDIDPTGQFMAVGSKDSLVSLWETDDLICLRSV 131
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A833QGC4_9POAL (THO complex subunit 3 isoform X2 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QGC4_9POAL) HSP 1 Score: 83.6 bits (205), Expect = 2.360e-16 Identity = 47/136 (34.56%), Postives = 73/136 (53.68%), Query Frame = 1
Query: 31 DILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIA-CEGEVRSLSFTPDGRFIAISMSGGGVEIVS 435
D L I D+R K + KF+ ++ W+ G+ T G+I+V + S K +R +AHTA C +++DP RY A G D LVSLW++ + +C+RT+ E VR++ F G FIA + V+I +
Sbjct: 130 DELTILDVRKLKTVHKHKFSYEINEIAWNKAGDRFFITTGNGTIEVFDYPSLK----LRHNLIAHTAGCYCISVDPSGRYFAVGSADSLVSLWDVKEMLCIRTLTKMEWPVRTVGFNHTGEFIASASEDPFVDIAN 261 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18241.5651.1 >prot_Ecto-sp13_S_contig18241.5651.1 ID=prot_Ecto-sp13_S_contig18241.5651.1|Name=mRNA_Ecto-sp13_S_contig18241.5651.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=147bp SSKKEKNTETDILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATEback to top mRNA from alignment at Ecto-sp13_S_contig18241:153..3317+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18241.5651.1 ID=mRNA_Ecto-sp13_S_contig18241.5651.1|Name=mRNA_Ecto-sp13_S_contig18241.5651.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3165bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18241:153..3317+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18241:153..3317+ >mRNA_Ecto-sp13_S_contig18241.5651.1 ID=mRNA_Ecto-sp13_S_contig18241.5651.1|Name=mRNA_Ecto-sp13_S_contig18241.5651.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=441bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18241:153..3317+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |