mRNA_Ecto-sp13_S_contig1823.5647.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1823.5647.1
Unique NamemRNA_Ecto-sp13_S_contig1823.5647.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1823.5647.1 vs. uniprot
Match: D7G5K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K0_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 1.550e-121
Identity = 176/264 (66.67%), Postives = 204/264 (77.27%), Query Frame = 1 
Query:    1 MVKSAGSTIRNILYTATQEEGLPAPPVCLNDHSES-ACHKAINSSAIITGFAESIRQVQLRLVPLEVAHRECDYFTVMRHPIDRLVSAFFYCPKDHDLQSRPPKWCGDAEHSAPMSERLLEYAQRRWKNKAFTQMTFGLYCPPGANCDTAKPGLPPALCEPEGQHVLQQVETILAGYRAIGIMEHWGLSMQLFNARVRSPVRDWNVSTHVNPGGGSGIRDEVLQWAHQSPAIHDALQTDMLLYSFALSIFKQQAMDALGTNWFE 789
            MVKSAGST++++L+ AT+ EGLP P VC+N H+ + AC +AINSSAIITG+AE IR       PLEV  RECDYFT++RHPIDRLVSAFFYCP DHD+Q RP KWCG AEH  P +ERLL++AQ  W+NKAF QMTFGLYCPP   CD A+   P  L EP    +LQQV+  LAGY A+GIMEHW LSMQLFNARVRSPVR+WN+    NPG  SG+RDEVLQWAH+SPAIH  + TDMLLY FALSIFKQQ   +LGTNW E
Sbjct:  153 MVKSAGSTVKSLLHRATRNEGLPRPAVCINGHARTDACLEAINSSAIITGYAELIRY------PLEVNRRECDYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHAEHPVPATERLLDFAQESWQNKAFKQMTFGLYCPPDTFCDEAEVESPQMLDEPGMLDILQQVQNTLAGYTAVGIMEHWDLSMQLFNARVRSPVREWNMFKQRNPGVMSGLRDEVLQWAHESPAIHRVIGTDMLLYYFALSIFKQQTTASLGTNWLE 410
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BLAST of mRNA_Ecto-sp13_S_contig1823.5647.1 vs. uniprot
Match: A0A6H5L5I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5I1_9PHAE)

HSP 1 Score: 332 bits (850), Expect = 3.950e-111
Identity = 157/268 (58.58%), Postives = 196/268 (73.13%), Query Frame = 1 
Query:    1 MVKSAGSTIRNILYTATQEEGLPAPPVCLNDHSE--SACHKAINSSAIITGFAESIRQVQLRLVPLEVAHRECDYFTVMRHPIDRLVSAFFYCPKDHDLQSRPPKWCGDAEHSAPMSERLLEYAQRRWKNKAFTQMTFGLYCPPGANCDTAKPGLPPALCEPEGQHVLQQVETILAGYRAIGIMEHWGLSMQLFNARVRSPVRDWNVSTHVNPGGGSGIRDEVLQWAHQSPAIHDALQTDMLLYSFALSIFKQQAMDALGTNWFEGAS 798
            MVKS GSTI           G P P +C+    E  ++C +A NSSA+I G+AE++RQ     VPLE   ++C+YFT++RHP+DRLVSAFFYCPK+HD+QSRPPKWCG A+H  P ++RLL+YAQ+ WKN A+ QM FG+YCP G  C+  +    P L EP G  VLQ+VE IL+ Y A+GIMEHW LSMQLFNARVRSPVR+WN++ H N G  S +RDEVLQWAH SP +H  + TDMLLYSFALSIFK+Q  +ALGTNW +G+S
Sbjct:   47 MVKSGGSTIXXXXXXXXXSAGDPRPGLCVAGGGEKTNSCKEAFNSSAVIMGYAEAMRQD----VPLEAVRKDCEYFTLLRHPVDRLVSAFFYCPKEHDVQSRPPKWCGYADHPLPATDRLLDYAQQYWKNMAYKQMAFGMYCPHGLICEATEVRTAPGLDEPHGLDVLQKVEDILSRYTAVGIMEHWDLSMQLFNARVRSPVREWNITQHSNAGLPSELRDEVLQWAHDSPVVHRLIATDMLLYSFALSIFKRQTTEALGTNWLDGSS 310
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BLAST of mRNA_Ecto-sp13_S_contig1823.5647.1 vs. uniprot
Match: A0A6H5JT23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT23_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 1.850e-109
Identity = 157/268 (58.58%), Postives = 197/268 (73.51%), Query Frame = 1 
Query:    1 MVKSAGSTIRNILYTATQEEGLPAPPVCLNDHSE--SACHKAINSSAIITGFAESIRQVQLRLVPLEVAHRECDYFTVMRHPIDRLVSAFFYCPKDHDLQSRPPKWCGDAEHSAPMSERLLEYAQRRWKNKAFTQMTFGLYCPPGANCDTAKPGLPPALCEPEGQHVLQQVETILAGYRAIGIMEHWGLSMQLFNARVRSPVRDWNVSTHVNPGGGSGIRDEVLQWAHQSPAIHDALQTDMLLYSFALSIFKQQAMDALGTNWFEGAS 798
            MVKS GSTI++ L+ +++  G P P  C+    +  ++C +A NSSA+I G+AE +RQ      PLE   R+C+YFT++RHP+DRLVSAFFYCP DHDLQ RPPKWCG A+   P ++RLLE+AQ+ WKN A+ QMTFG+YCP G  C+  +    P L EP G  VLQ+VE IL+GY A+GIMEHW LSMQLFNARVRSPVRDWN++   N G  S +RDEVLQWAH SP IH  + TD+LLYSFALSIFK+Q  ++LGTNW  G+S
Sbjct:   47 MVKSGGSTIKHNLHISSRAAGGPRPGSCVAGGGKRINSCKEAFNSSAVIMGYAELMRQDG----PLEAVRRDCEYFTLLRHPVDRLVSAFFYCPTDHDLQLRPPKWCGYADDPLPATDRLLEFAQQHWKNMAYKQMTFGMYCPHGLICEATEVETAPGLDEPHGLDVLQKVEDILSGYTAVGIMEHWDLSMQLFNARVRSPVRDWNMTVRSNAGLPSELRDEVLQWAHDSPVIHRLMATDLLLYSFALSIFKRQTTESLGTNWLGGSS 310
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BLAST of mRNA_Ecto-sp13_S_contig1823.5647.1 vs. uniprot
Match: A0A6H5K0M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0M4_9PHAE)

HSP 1 Score: 324 bits (830), Expect = 6.390e-109
Identity = 160/252 (63.49%), Postives = 186/252 (73.81%), Query Frame = 1 
Query:   37 LYTATQEEGLPAPPVCLNDHSES-ACHKAINSSAIITGFAESIRQVQLRLVPLEVAHRECDYFTVMRHPIDRLVSAFFYCPKDHDLQSRPPKWCGDAEHSAPMSERLLEYAQRRWKNKAFTQMTFGLYCPPGANCDTAKPGLPPALCEPEGQHVLQQVETILAGYRAIGIMEHWGLSMQLFNARVRSPVRDWNVSTHVNPGGGSGIRDEVLQWAHQSPAIHDALQTDMLLYSFALSIFKQQAMDALGTNWFE 789
            L   T    + A  VC+N+   + AC +AINSSAIITG+AE IR    R+ PLEV  REC YFT++RHPIDRLVSAFFYCP DHD+Q RP KWCG  EH  P +ERLL++AQ  W+N+AF QMTFGLYCPP   C+ A+   P  L EP    VLQQV+ ILAGY A+GIMEHW LS+QLFNARVRSPVR+WNVS   NPG  + +RDEVLQWAH+SPAIH  + TDMLLYSF LSIFKQQ   +LGTNW E
Sbjct:    8 LTPGTDVGNVKADTVCINEQDRTNACLEAINSSAIITGYAELIR----RVYPLEVERRECQYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHEEHPVPATERLLDFAQESWRNQAFKQMTFGLYCPPDTFCEEAEVDSPQMLDEPGILDVLQQVQDILAGYTAVGIMEHWDLSIQLFNARVRSPVREWNVSKQRNPGVMTRLRDEVLQWAHKSPAIHRVIGTDMLLYSFGLSIFKQQTTASLGTNWLE 255
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BLAST of mRNA_Ecto-sp13_S_contig1823.5647.1 vs. uniprot
Match: A0A6H5JT32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT32_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 3.620e-98
Identity = 147/262 (56.11%), Postives = 187/262 (71.37%), Query Frame = 1 
Query:    1 MVKSAGSTIRNILYTATQEEGLPAPPVCLNDHS-ESACHKAINSSAIITGFAESIRQVQLRLVPLEVAHRECDYFTVMRHPIDRLVSAFFYCPKDHDLQSRPPKWCGDAEHSAPMSERLLEYAQRRWKNKAFTQMTFGLYCPPGANCDTAKPGLPPALCEPEGQHVLQQVETILAGYRAIGIMEHWGLSMQLFNARVRSPVRDWNVSTHVNPGGGSGIRDEVLQWAHQSPAIHDALQTDMLLYSFALSIFKQQAMDALGTNW 783
            MVKS GSTI++ L  A + +G+  P +C+N    E +C KA++S+ +I G+AE +R       PLEV  REC+YFTVMRHPIDRL+SAFFYCP   D+Q RPPKWCG A    P+++RL+E+A+  WKNKAF QMTFGLYCPP A C+ A+PG   A+ EP G  +L+Q+E ILA Y A+GI+E+W LSMQLFNARV SPV DW    H N G  SG+RDEV +WAH SP IH  + TDMLLY +++S+FK Q   +LGT W
Sbjct:  134 MVKSGGSTIKDKLDIAAKADGVDGPAMCVNGVGYEDSCLKAMHSAPVIVGYAELLRY------PLEVIGRECEYFTVMRHPIDRLLSAFFYCPAYGDVQDRPPKWCGYANDPQPVTDRLVEFAKYGWKNKAFRQMTFGLYCPPNAFCEQAEPGAQQAVHEPGGWILLEQIEAILATYTAVGILEYWDLSMQLFNARVTSPVWDWEDMEHSNRGQRSGLRDEVHRWAHMSPEIHRVMATDMLLYDYSVSVFKLQTSASLGTIW 389
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BLAST of mRNA_Ecto-sp13_S_contig1823.5647.1 vs. uniprot
Match: A0A6H5JUF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUF0_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 7.970e-94
Identity = 139/223 (62.33%), Postives = 157/223 (70.40%), Query Frame = 1 
Query:  187 PLEVAHRECDYFTVMRHPIDRLVSAFFYCPKDHDLQSRPPKWCGDAEHSAPMSERLLEYAQRRWKNKAFTQMTFGLYCPPGANCDTAKP----------------------GLPPALCEPEGQHVLQQVETILAGYRAIGIMEHWGLSMQLFNARVRSPVRDWNVSTHVNPGGGSGIRDEVLQWAHQSPAIHDALQTDMLLYSFALSIFKQQAMDALGTNWFE 789
            PLEV  REC YFT++RHPIDRLVSAFFYCP DHD+Q RP KWCG  EH  P +ERLL++AQ  W+N+AF QMTFGLYCPP   C+ A+                       G P  L EP    VLQQV+ ILAGY A+GIMEHW LSMQLFNARVRSPVR+WNV    NPG  +G+RDEVLQWAH+SPAIH  + TDMLLYSF LSIFKQQ   +LGTNW E
Sbjct:    6 PLEVERRECQYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHEEHPVPATERLLDFAQESWRNQAFKQMTFGLYCPPDTFCEVAEVNNVSQCETFVVGVGSLDGLREVGPPQMLDEPGILDVLQQVQDILAGYTAVGIMEHWDLSMQLFNARVRSPVREWNVFKQRNPGVMTGLRDEVLQWAHKSPAIHRVIGTDMLLYSFGLSIFKQQTTASLGTNWLE 228
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BLAST of mRNA_Ecto-sp13_S_contig1823.5647.1 vs. uniprot
Match: D8LHT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHT4_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 1.370e-75
Identity = 123/268 (45.90%), Postives = 164/268 (61.19%), Query Frame = 1 
Query:    1 MVKSAGSTIRNILYTATQEEGLPAPPVC-LNDHSESACHKAINSSAIITGFAESIRQVQLRLVPLEVAHRECDYFTVMRHPIDRLVSAFFYCPKDHDLQSRPPKWCGDAEHSAPMSERLLEYAQRRWKNKAFTQMTFGLYCPPGANCDTAKPGLPPA-LCEPEGQHVLQQVETILAGYRAIGIMEHWGLSMQLFNARVRSPVRDWNVSTHVNPGGGSGIRDEVLQWAHQSPAIHDALQTDMLLYSFALSIFKQQAMDALGTNWFEGAS 798
            MVK+ G+ +R+ L  A++ +G   P +C +   S  AC  A++ S++I G+ E +R       P+E   R CDYFT+MRHPIDRLVSAF+YCP  HD Q RP KWCG   H  P++ RLL++A+  W  KA  Q++F  YCPPGA C+      PP  L   E   +L   E +L  Y A+GI E W LSM+LF+A + SPV+ W     VNPG  S  R+ +L+WAH SP I  A+  D+LLY  ALSIFK+Q  +ALGT W  G +
Sbjct:   35 MVKNGGTAVRDQLILASEIQGRDVPGLCVIGPSSAEACLDALHHSSVIMGYVELLRD------PMEELGRRCDYFTMMRHPIDRLVSAFYYCPTFHDKQVRPNKWCGGHSHPDPLTSRLLDFAREDWMCKAMFQLSFASYCPPGAFCEHDMVEEPPTHLNGVEDWSLLAVAEDVLLSYTAVGIFEEWELSMELFDAVISSPVQQWGGEEAVNPGPKSSEREMLLRWAHSSPEIRQAVGGDLLLYDLALSIFKRQTAEALGTVWKNGGT 296
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BLAST of mRNA_Ecto-sp13_S_contig1823.5647.1 vs. uniprot
Match: D7FUF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF7_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 6.810e-59
Identity = 92/136 (67.65%), Postives = 105/136 (77.21%), Query Frame = 1 
Query:  376 WKNKAFTQMTFGLYCPPGANCDTAKPGLPPALCEPEGQHVLQQVETILAGYRAIGIMEHWGLSMQLFNARVRSPVRDWNVSTHVNPGGGSGIRDEVLQWAHQSPAIHDALQTDMLLYSFALSIFKQQAMDALGTNW 783
            W+N AF QMT+GLYCPP A C   +   P  + EP G  +LQQVE ILAGY A+GIMEHWGLSM+LFNARVRSPVR+WN     NPG  SG+RD+VLQWAH++PAIH  L  DMLLYSFALSIFKQQ  +ALGTNW
Sbjct:    2 WQNLAFKQMTYGLYCPPEAICGEMQLDAPQMVDEPGGLDLLQQVEDILAGYAAVGIMEHWGLSMELFNARVRSPVREWNRFKQKNPGVTSGLRDQVLQWAHENPAIHRVLGADMLLYSFALSIFKQQTAEALGTNW 137
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BLAST of mRNA_Ecto-sp13_S_contig1823.5647.1 vs. uniprot
Match: A0A6H5KCY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCY2_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 1.330e-57
Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 1 
Query:  511 TILAGYRAIGIMEHWGLSMQLFNARVRSPVRDWNVSTHVNPGGGSGIRDEVLQWAHQSPAIHDALQTDMLLYSFALSIFKQQAMDALGTNWFEGASP 801
            TILAGYRAIGIMEHWGLSMQLFNARVRSPVRDWNVSTHVNPGGGSGIRDEVLQWAHQSPAIHDAL+TDMLLYSFALSIFKQQA DALGT+W E  +P
Sbjct:   90 TILAGYRAIGIMEHWGLSMQLFNARVRSPVRDWNVSTHVNPGGGSGIRDEVLQWAHQSPAIHDALRTDMLLYSFALSIFKQQATDALGTDWLECTTP 186
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1823.5647.1 vs. uniprot
Match: A0A6H5JQY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY1_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 4.640e-52
Identity = 84/139 (60.43%), Postives = 100/139 (71.94%), Query Frame = 1 
Query:   37 LYTATQEEGLPAPPVCLNDHSES-ACHKAINSSAIITGFAESIRQVQLRLVPLEVAHRECDYFTVMRHPIDRLVSAFFYCPKDHDLQSRPPKWCGDAEHSAPMSERLLEYAQRRWKNKAFTQMTFGLYCPPGANCDTAK 450
            L   T    + A  VC+N H  + AC +AINSSAIITG+AE IR    R+ PLEV  REC+YFT++RHPIDRLVSAFFYCP DHD+Q RP KWCG  EH  P +ERLL++AQ  W+N AF QMTFGLYCPP   C+ A+
Sbjct:    8 LTPGTDVGNVKADTVCINGHDRTNACLEAINSSAIITGYAELIR----RVYPLEVERRECEYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHEEHPVPATERLLDFAQESWQNMAFKQMTFGLYCPPDTFCEEAE 142
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1823.5647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7G5K0_ECTSI1.550e-12166.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5I1_9PHAE3.950e-11158.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT23_9PHAE1.850e-10958.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0M4_9PHAE6.390e-10963.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT32_9PHAE3.620e-9856.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUF0_9PHAE7.970e-9462.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHT4_ECTSI1.370e-7545.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FUF7_ECTSI6.810e-5967.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCY2_9PHAE1.330e-5792.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQY1_9PHAE4.640e-5260.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1823contigEcto-sp13_S_contig1823:1772..8239 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score67.4
Seed ortholog evalue1.2e-08
Seed eggNOG ortholog2880.D7G715
Model size804
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2CYGC@1,2S47N@2759
Cds size804
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1823.5647.1prot_Ecto-sp13_S_contig1823.5647.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1823 1772..8239 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462940.0883553-CDS-Ecto-sp13_S_contig1823:1771..20651681462940.0883553-CDS-Ecto-sp13_S_contig1823:1771..2065Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1823 1772..2065 -
1681462940.1182418-CDS-Ecto-sp13_S_contig1823:3592..36521681462940.1182418-CDS-Ecto-sp13_S_contig1823:3592..3652Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1823 3593..3652 -
1681462940.1287582-CDS-Ecto-sp13_S_contig1823:5425..55661681462940.1287582-CDS-Ecto-sp13_S_contig1823:5425..5566Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1823 5426..5566 -
1681462940.1383336-CDS-Ecto-sp13_S_contig1823:5811..59381681462940.1383336-CDS-Ecto-sp13_S_contig1823:5811..5938Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1823 5812..5938 -
1681462940.1467342-CDS-Ecto-sp13_S_contig1823:6890..69961681462940.1467342-CDS-Ecto-sp13_S_contig1823:6890..6996Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1823 6891..6996 -
1681462940.1554098-CDS-Ecto-sp13_S_contig1823:8163..82391681462940.1554098-CDS-Ecto-sp13_S_contig1823:8163..8239Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1823 8164..8239 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1823.5647.1

>prot_Ecto-sp13_S_contig1823.5647.1 ID=prot_Ecto-sp13_S_contig1823.5647.1|Name=mRNA_Ecto-sp13_S_contig1823.5647.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=268bp
MVKSAGSTIRNILYTATQEEGLPAPPVCLNDHSESACHKAINSSAIITGF
AESIRQVQLRLVPLEVAHRECDYFTVMRHPIDRLVSAFFYCPKDHDLQSR
PPKWCGDAEHSAPMSERLLEYAQRRWKNKAFTQMTFGLYCPPGANCDTAK
PGLPPALCEPEGQHVLQQVETILAGYRAIGIMEHWGLSMQLFNARVRSPV
RDWNVSTHVNPGGGSGIRDEVLQWAHQSPAIHDALQTDMLLYSFALSIFK
QQAMDALGTNWFEGASP*
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mRNA from alignment at Ecto-sp13_S_contig1823:1772..8239-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1823.5647.1 ID=mRNA_Ecto-sp13_S_contig1823.5647.1|Name=mRNA_Ecto-sp13_S_contig1823.5647.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6468bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1823:1772..8239- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTGAAAAGCGCGGGCTCGACCATCAGAAACATTCTTTACACGGCTAC
GCAGGAAGAAGGTCTCCCAGCACCACGTGAGACTGCTATTGTAGAAACGT
AGGTATGTGTATTAGAACAACAACTTTAAGTATTGGCTCCTGATTAGTTG
TAGCAAATATCAAGTGAGTACGGAACATCGCAGCGCTCGGTCCGCCCTAT
GAAGGTCGTCTCCAGACGTCGTACGTCAAGTGCACAACATACTTTCGCTC
GATCCAAGCTCGTTTGTCCCAACCAAACCACGCGGATCATTGAAGAGGGT
AGATACGCGGGAACGGGCACAACCCGTTGTCATATCGGTCGCCAACATGC
CATGCCACACGCACACCAAGTGAAAGGTAACGAGAATGGATTCATTGTTT
CGGGGGCCTACAGCCAAGCTCAGCGAACCGGCCAACGTGTGAATATTCTT
GCCTGGTCTAGGGGTGCACGCAGAAGAATTTCTTGCGCAAAACAGGTCTG
GGTACCGCTTAACTTTTTATTTGTGGGGGGTTTCCCGGGGACAAGCAGTT
TTGCGGGGGCGAGCGAGGATCTCCTTTTGCGACCCCCGAGGCCATGATCA
CACACAAAGTTTCCGCTCTACGTGGCAGATCAAACGAGCACCTAATCCGC
TTCATACGTGCTTGAAACGTCGTCACCAGTGTAGCACGGGATGTGCCTCC
GATATATTCGCAGCTCGCTTGAAGTTACAACCCCCACGAACAACTCTACG
AAAGCAAAACTCTCGCGAGAATGATATTGTCACTTTCGGAGGGGGCAGTA
GGAGTGCCGGATAAAGTTGTTCGTACTCCCTTGCCTGGTCATCTGAAAGG
CAACACTGCACGCGTGTACGCGAGGGTGTGAAGTCACACCACGACAAACA
CACGTTCTACGTCTTCTGATGGAGGTAGTACTGGAGATGTCGGCGCTAAT
ACGCATGTCGGCAAAGGACAGTCGACAACATTGTGTGAATCGCCTATCGC
GAGCGCGAGTTATGAGCGCAAAGAAATCCTTGTACGTACCGAGATCTTGG
CACTCCAAAGAAGTGTTCAATTCTGTCGTGGTGTATACCTTGTTCACCAG
CAGGTCAGTTTCAACTTACCGGTGCCGATACTTGTTTTGGGGTCAGAGAA
AAAATATTTTCATTGAATATCCGTTCCTGCCGACTCCAAAATGACGTGAA
CCACCCACCATGTTCCTGCTTCTTTTTTTTTTCTCTGGCGTAGCCGTTTG
CTTGAACGATCACAGTGAAAGCGCTTGCCATAAAGCCATCAACTCTTCTG
CGATCATCACGGGATTCGCGGAATCTATCAGGCAAGTGCAACTGCGGCTG
TTCGAAACTGGCGTTGATTAGTCTAGAGCTGCTGTGATGGGTGGCGAATG
TTGTATGATACTGTTCGGATTTTTTGGAAGAAAACTAACGTCCATGTACA
CCAAACTGCGCAACTTTCCCAGCACCACGGTACACATTCCATCGATGAAT
GCATGTATGTTGGGGATCCAACTATGGGATTTCGACCCAATTTGCGGCGA
AGTATTCCTCTCGTCAATCCCCAACGCAGTATACCGATGATTTTCTGACA
AAATCGTAATTGTTGCAACAAACGTCACAACAAGTTATTGCTCCAAATAC
GGAGAGTACCACGGATGAAGAAGCGGGGGAATCTAGGAGGCCGGTCCGTG
GTGGAACCGTAGGTCAAGTAGAGATGAACGTAGCCAATAATGGTGCGCTT
TCTCAAACGAATGTCTCTGCAGCTATCGACATTGCACGACGAGGTGATGA
GGAAGAAGATCATCGTTTCACGTCTCACTCTCGTCATAAATAATTTGTTA
GCTTGTTGGACAAATTATTGTGCATACGCAACATGTATGTCACCGCAAGG
TAGGGTGAGCGCCAATGAAGATTTCGGATACGTGAGCCAGCCCCTCGGGA
GGGATTTCGAAAAGTTTCCAAAAGCGGGGTGGATTGTTTTTGAATTGTTG
CTCAATAGCTTCACAAGAGATTGAGTAGTGTTGAGTAAAAAATCGAGGAG
CTCAATGTGATTGAGTAAGTGACGTTTGTGACGCAGCTTCCGACTACAAA
TGGCTCAAACGTTCCACGATGGCCAATTTGGTGCCTCCTTTTTTGGTTTT
GAATCGTGCTACTACACACCCCAACTCCGATTCATGGGGCGTTCTGCGTT
GTTTCTCGGCAGTTTGATATAAGATGATGGAAATCCGACCCGTTAGGGGC
ATGCTGACCGATTGGAACGCTTGATTCCACATTTCTTCTCCGTCGTCCCA
GAGTTCCTTTGGAGGTTGCCCACCGGGAATGCGATTACTTCACGGTTATG
AGGCATCCCATCGATCGCCTCGTCTCGGCATTCTTCTACTGCCCAAAGGA
CCATGATCTGCAAAGCAGGCCTCCGAAGGTGGGTGTCAACAATGTCCTGC
CACCGAACGTGAAAGCCGAAATATCGTTCTACCCCCCCCCGCCGTGCTGC
GTGCATCTCGTGTTGAAAGATGGCCACCGTTACGGAATCATCTAGAGGAG
AAAACCATGTCCATGTGAGGGCGGCTTTAGTTGAAAGTTCGGGTGTAACG
TGCCCCCTCTGAGGGACGTAGCGATAACGCATGGTAGCACTCTTAACGAC
GCACCTCCCCCTAATGATTGCAGTGGTGTGGGGACGCTGAACACTCGGCG
CCCATGAGCGAGCGCCTGTTGGAGTACGCTCAGAGGCGGTGGAAAAACAA
GGCATTCACGCAGATGACGTTCGGCCTGTACTGTCCTCCGGGTGCCAACT
GCGACACGGCAAAGGTGAAAGTGGTCGAGGTATCCGGTAGACGTCGTTGT
GATTTGATGGATTTCCCGTATCTACAAACGTACGCTGCGGTTGCAGTTCG
GCTGACACGAGGTTGGTTGTGAGCACCAAAGGCTCGTTTCTGGTTGTTTG
GGGTTTTCTTTGAGCCCTAGGAACGTTTCGGGCCGAACGAACACAAGGCA
ACGCAATTTCACCCACACTTATCTCCAGCATTACAACGGACTCCGTATTT
GAACATCCACCGAACTCAGCCCCCCACCCCCCGCCGTTTGCAGCCCGCTT
ATGACGGGGTTTGCAGGGAATTGTATGTTATAGTCCCCTGCCACACATAC
TAATGGGCGTTTGACACGATGGTGCTGCTATTGTCAACCTGATAGATGCC
ATGGCGCTCCTTACCCACTCGCACGCACAATAGTAAAAACAACCAGACAT
TGTGCTGAAGAGTAATGAAACTCAATTCTTGAACTGTCGAGTGTGATCGA
TCGAAGTCGTGGCCCACTGAAAACGGCGACAGGCGACACCTGAATTATCG
TGTTGGTGAGATTTAGAAGTCGATCCGATTGTTCCGTTCACTTCGCCTGT
TCCTTTCCAGCCAACTACAGTAGTACGTGGCAACACAACAGAAAAAGCGG
CATCTACAGTACATCATTCGGAGGACGAAGGGCGCGGTATATTGGGCCGC
TCACCCTTGTCCCTCTCGAGCTCTGTCCCCTGATCATCTGCACCTTACTC
TGTCTCTCGCTCTCTAGCGTCCTGGCTGTTTCGGGGAAGATGCCCAGAAA
TATATAGAACTACTGTAGAGTGAAACATTGACCCCCCCACCCACTGGGGG
CGGGCAGGGGCATTGTGTAGATGACACAGACATCGAGTAGGTTCGGAACC
GCCGACGTTTGCTGCGCGTCTTTGGCCGATGCTGTCAATCATTCAAACTG
GATAGCGTACATGTTCTTTTCGTGGGTAATGCGAATTTCGTATTCAAATA
CCTCATCCCTACAACCAACACCCGCGTCACCAATCAATCCTCCTGCATTC
TGTGCGGCAATAGTCTGGATATCACTATTTTTGGGATAAATCATTTGCCG
GTCGCCACGGTGGTCTAGGGGCAAACTCCGAACCGCTAGTGGCAAAGTCG
TGAGTTTGAATCCCCCTGAGTGAAAGCAATAAAGCTGAAAAGCTCGTGAG
TACCAAACTTGGGCTTTAGTACCGTTGACGAGGGAAGGCACGGCTAGACC
CTTCTCGCGAAAAAAGTAAAATTTAGCCCCCACCGCAGGAGAACGGAGGG
TCACGAAAATCAATACAAAAAGGACACAAACGCCCCCCTCTTTTTTGACC
CTGGATGGTTGTAGTTGTACGAAAATATTCACTGGAAAGTGTAAGAGTCT
ACACACGCTGGACACGTGCAACATAGAACATGTCTCACCACGAAGAATGG
TGGATAGGAACACGCACCAGACAAAAGCATTAGGGTGCCCTCTCTCGTGA
CACGTGGAAAGTTAATCGCCGCATTCGCATTGTTGTGTGTTAGAGTTTAA
ATTGGGTAGTTCGTGGAACGAGATACACGGGGGGGGGCTCAGCGGAAGAA
CGCTACACGTGCACCATGAAGATCGGGACCTTTGCTCCTGTCTGTCAATG
AGTAACACGGGTACCTTAAATTGATGGTAAATTGCCATCACTGACGATCG
ACCTCGCGTGGTACCTTGTCAAAACGATACATTTCAAATTTTACGATTGT
TTACCATGTGTGTGTGGCTCATCTGGGTTGTCCGAAGCCTGGATTGCCGC
CGGCGCTGTGTGAACCCGAGGGTCAACATGTTCTCCAGCAGGTCGAGGTG
AGGGGGAAATCCGCATTGTTGTTGCTCGTCACCGGAGTACGGGGAATGCA
ACGCACCTGCCGCACCGGGAATCAGTTGTTCGGCCTCCTACATCAGAATG
GAGAATGTGACACTCGTGGACTCGGTGTTCTGCATCTTCCAGATGAAGAG
GGCATGTATCACCCAAATGTTTGCACACGTGGATGCTTTTCGAGCGGTGC
GTATGTTGTGTTCAAGCACCGCATTGAATCCTACTGGAATCGGCTTCAAT
CTCCTACTACCTTTTTGGCTTCCATGGAAATGCGCTAATTATTTCCATGG
ACGTCCGTGCAATGTGGCTTCCATGGAAGCTTAGGGACATTCGTGGAAAG
GCGGTTCCCGAGCGTCTTCCACGGAAACCGTTGGGATTGCTGTCCATTGA
AGTCGCCCACCTTGGGGTAGCTTCCATGGAAGTAGAAGTAGGACCATCAC
CAATGGAAAAATATCGCCCGAGGTCAGCTTCCATGAAAGTCAACATGAGC
GACGTCGACAAACGCTTTGGAAGACTGCTTTCATTGACGCTGATCGCGGA
CGACTCCTATGCTGTCAGACCTTCGACTCTCCTCGTGTCTGCTTTGTCCT
CGCAATACCCATCGGGCGTTGTTCCGCTCTCTCGCTTTCGGCCGCTGTCC
CCACAATAACGCGGTCATCACAAATATTTAGTGCTTACAGTAACTACGTT
GTTACAGTAATCACCAAATCACTAACATCCTTTCTCCTTTTTTCTGGCGG
TACTCCTTCATAACTAGACTTGTGTACAAAGGGTCTACAGCCAGAAGTTC
CACGCGCTTCCGAAGTCGTCGTCCACGATTGTTTCACTACATACTGCTTG
TACAACATGCATCACGTCCTTTCATAGTCGGGGTGGGATTCCAAATTTCG
CACATCACCGTTTGCCTTTTGGGACCATGGGCGAATCTGCAACATTCGGT
GTTCATATGTATCCAACTCCTTAACATATTTCAACTCAGTCATTCTTTGC
TGCCCGCCTCTTTAGCGGGTGGGGTGGCAGTTGTTACCCCTAGCAGTCTT
TTGTTGTGGCTGCTTGCTTCTACTTTATTTCATGGATGCCACCCAACAAC
CGCCGTGTGGTGTCCCACGTAGGGCATGCCGCGTATTGCTGTCGACCCAG
AATGAATGTGCCACACACGATCTCGGCTTTTGGTACTCCACACATTGCAC
CAGTTAGGGAACAACAGTTATCTCCATCACGTCGCGTGCGTTTCTTCTTT
CGGCGACTGACCCATCCCGCAACCAATTCTGATTCCGAAGCAACCGTTCT
TCGACAACATTTCGATAATGGCACCGGGTTGATGGCGCTTGCCACCATGT
TGTCAAGGCCGATCTAAGACACGCAATCACGGGAAATATATCGCACAAGG
TTTAGGTGTTTCATGAAGAAGTCGTCAGGCTCAGATTTAAAACTTTAGCC
TGTCATCTCTGACTACGAGAACGCCCGTCTGGTGAACGTGTTTTGCCTCC
ACTGAATAACTCTGACTTTGGCAGACCATCTTGGCTGGATATCGGGCAAT
CGGAATTATGGAGCATTGGGGGCTGTCTATGCAGCTCTTCAATGCCCGCG
TGCGGTCCCCAGTGCGTGATTGGAACGTGTCCACTCACGTTAACCCGGGG
GGGGGGTCCGGGATTCGTGATGAGGTACTCCAGTGGGCTCATCAAAGCCC
GGCCATTCACGACGCGTTACAGACAGATATGCTGCTGTACTCTTTCGCGC
TGTCCATTTTCAAGCAGCAGGCGATGGATGCACTCGGTACGAACTGGTTC
GAAGGCGCATCACCTTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1823:1772..8239-

>mRNA_Ecto-sp13_S_contig1823.5647.1 ID=mRNA_Ecto-sp13_S_contig1823.5647.1|Name=mRNA_Ecto-sp13_S_contig1823.5647.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=804bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1823:1772..8239- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTGAAAAGCGCGGGCTCGACCATCAGAAACATTCTTTACACGGCTAC
GCAGGAAGAAGGTCTCCCAGCACCACCCGTTTGCTTGAACGATCACAGTG
AAAGCGCTTGCCATAAAGCCATCAACTCTTCTGCGATCATCACGGGATTC
GCGGAATCTATCAGGCAAGTGCAACTGCGGCTAGTTCCTTTGGAGGTTGC
CCACCGGGAATGCGATTACTTCACGGTTATGAGGCATCCCATCGATCGCC
TCGTCTCGGCATTCTTCTACTGCCCAAAGGACCATGATCTGCAAAGCAGG
CCTCCGAAGTGGTGTGGGGACGCTGAACACTCGGCGCCCATGAGCGAGCG
CCTGTTGGAGTACGCTCAGAGGCGGTGGAAAAACAAGGCATTCACGCAGA
TGACGTTCGGCCTGTACTGTCCTCCGGGTGCCAACTGCGACACGGCAAAG
CCTGGATTGCCGCCGGCGCTGTGTGAACCCGAGGGTCAACATGTTCTCCA
GCAGGTCGAGACCATCTTGGCTGGATATCGGGCAATCGGAATTATGGAGC
ATTGGGGGCTGTCTATGCAGCTCTTCAATGCCCGCGTGCGGTCCCCAGTG
CGTGATTGGAACGTGTCCACTCACGTTAACCCGGGGGGGGGGTCCGGGAT
TCGTGATGAGGTACTCCAGTGGGCTCATCAAAGCCCGGCCATTCACGACG
CGTTACAGACAGATATGCTGCTGTACTCTTTCGCGCTGTCCATTTTCAAG
CAGCAGGCGATGGATGCACTCGGTACGAACTGGTTCGAAGGCGCATCACC
TTAG
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