prot_Ecto-sp13_S_contig18223.5644.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18223.5644.1
Unique Nameprot_Ecto-sp13_S_contig18223.5644.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length38
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18223.5644.1 vs. uniprot
Match: A0A6H5J947_9PHAE (PAP2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J947_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 2.310e-6
Identity = 20/25 (80.00%), Postives = 23/25 (92.00%), Query Frame = 0 
Query:    9 LLGGPKLQREGSNVSTWDWSESGWD 33
            LLGGPKLQR+ S+ STWDWSE+GWD
Sbjct:    3 LLGGPKLQRDQSHASTWDWSENGWD 27
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18223.5644.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J947_9PHAE2.310e-680.00PAP2_C domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18223contigEcto-sp13_S_contig18223:385..498 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18223.5644.1mRNA_Ecto-sp13_S_contig18223.5644.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18223 385..498 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18223.5644.1 ID=prot_Ecto-sp13_S_contig18223.5644.1|Name=mRNA_Ecto-sp13_S_contig18223.5644.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=38bp
MGTDVEIGLLGGPKLQREGSNVSTWDWSESGWDGDLIP
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