prot_Ecto-sp13_S_contig18201.5636.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18201.5636.1
Unique Nameprot_Ecto-sp13_S_contig18201.5636.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length375
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18201.5636.1 vs. uniprot
Match: D8LH03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH03_ECTSI)

HSP 1 Score: 303 bits (775), Expect = 6.320e-98
Identity = 287/379 (75.73%), Postives = 297/379 (78.36%), Query Frame = 0 
Query:    1 MEDTSEEVALASTASPSPIPPPPGRDPSATTPRQCFRMESLATLTAPLDAESTARAARTRSSRLPPNRTYAN----RLGYGDI-EEEKLPIPDKRQLESWARYGFVDTELLLQAAGQHQGGRKAAALSEGLTIVEEEQGRDASRSLVRIGAAAEEAGDGLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEGGADGDVSLAVSSSTPLTETMTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQQEANQGSRAGNSRRAAQTKAEIERHKRNRAERLRAYGCQR 374
            MEDTSEEVALASTASPSPIPPPPGRDPS  TPRQCFRMESLATLTAPLDAESTARAARTRSSRLPPNRTYA+    R+G+GDI EEEKLPIPDKRQLESWARYGFVDTELLLQAA Q QGGRKAAALSEGL IVEEEQG D SRSLVR+GAAAEEAGDGL+           XXXXXXXXXXXXXXXXXXXXXXXXX         PEGGA+GD+SLA+ SSTPLT+TMTPS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                               QEANQGSRAG+SRRAAQTKAEIERHKRNRAERLRAYGCQR
Sbjct:    1 MEDTSEEVALASTASPSPIPPPPGRDPSPNTPRQCFRMESLATLTAPLDAESTARAARTRSSRLPPNRTYASTSAIRVGHGDIIEEEKLPIPDKRQLESWARYGFVDTELLLQAAVQPQGGRKAAALSEGLAIVEEEQGGDVSRSLVRMGAAAEEAGDGLQEVLGERKENDHXXXXXXXXXXXXXXXXXXXXXXXXX---------PEGGAEGDISLAIGSSTPLTDTMTPSSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------QEANQGSRAGSSRRAAQTKAEIERHKRNRAERLRAYGCQR 323
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18201.5636.1 vs. uniprot
Match: A0A6H5KJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ42_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 1.710e-63
Identity = 256/380 (67.37%), Postives = 262/380 (68.95%), Query Frame = 0 
Query:    1 MEDTSEEVALASTASPSPIPPPPGRDPSATTPRQCFRMESLATLTAPLDAESTARAARTRSSRLPPNRTYA----NRLGYGDIEEEKLPIPDKRQLESWARYGFVDTELLLQAAGQHQGGRKAAALSEGLTIVEEEQGRDASRSLVRIGAAAEEAGDGLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--PEGGADGDVSLAVSSSTPLTETMTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQQEANQGSRAGNSRRAAQTKAEIERHKRNRAERLRAYGCQR 374
            MED SEEVALASTASPSP+PPPPGRDPSATTPRQCFR ESLATLTAPLDAESTARAARTR SRLPPNR YA    N LG+GD EEEKLPIPDKRQLESWARYGFVD ELLL AA Q QGGR                     RS                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              PEGGA+ D+SLAV SSTPLT+TMTPS    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               XXXXXXXXXXXXXXXXXXXX                    XXX           AQQEANQGSRAG+SRRAAQTKAEIERHKRNRAERLRAYGCQR
Sbjct:    1 MEDLSEEVALASTASPSPMPPPPGRDPSATTPRQCFRAESLATLTAPLDAESTARAARTRCSRLPPNRAYASTTVNSLGHGDNEEEKLPIPDKRQLESWARYGFVDAELLLLAADQPQGGRXXXXXXXXXXXXXXXXXXXXGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHESTPATADGERRRPEGGAERDISLAVGSSTPLTDTMTPSSQERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTPAGGLDSMAASLXXXXXXXXXXXXXXXXXXXXTKEVELAELTQQEEREADVAXXXTV---------AQQEANQGSRAGSSRRAAQTKAEIERHKRNRAERLRAYGCQR 371
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18201.5636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LH03_ECTSI6.320e-9875.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJ42_9PHAE1.710e-6367.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 145..165
NoneNo IPR availableCOILSCoilCoilcoord: 299..323

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18201contigEcto-sp13_S_contig18201:1798..2922 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18201.5636.1mRNA_Ecto-sp13_S_contig18201.5636.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18201 1798..2922 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18201.5636.1 ID=prot_Ecto-sp13_S_contig18201.5636.1|Name=mRNA_Ecto-sp13_S_contig18201.5636.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=375bp
MEDTSEEVALASTASPSPIPPPPGRDPSATTPRQCFRMESLATLTAPLDA
ESTARAARTRSSRLPPNRTYANRLGYGDIEEEKLPIPDKRQLESWARYGF
VDTELLLQAAGQHQGGRKAAALSEGLTIVEEEQGRDASRSLVRIGAAAEE
AGDGLRRQNEQQEEEQEVVGERENHHHPPASRSPTTIHESTPATAEDERR
RPEGGADGDVSLAVSSSTPLTETMTPSSQERRRDNTTASADAAAGIATAV
SNEGSSSQTTAKTTRTPAGGLDSMAASLLASSAAAAAASSAASQEAARGK
EDDEEEETKEDELAELKQQEEREAAVAAAATVAQQEANQGSRAGNSRRAA
QTKAEIERHKRNRAERLRAYGCQR*
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