prot_Ecto-sp13_S_contig1819.5626.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1819.5626.1
Unique Nameprot_Ecto-sp13_S_contig1819.5626.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length514
Homology
BLAST of mRNA_Ecto-sp13_S_contig1819.5626.1 vs. uniprot
Match: D7G6S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6S9_ECTSI)

HSP 1 Score: 518 bits (1335), Expect = 8.260e-179
Identity = 329/446 (73.77%), Postives = 357/446 (80.04%), Query Frame = 0
Query:   76 MDKVMEGFVSGVKQVWAWVSNPFEFCXXXXXXXXXXXXXXXXXXXXD-IDLWHKDNNGVTTCVTTSAEGRVIVRGGL-KKKNGKTGRLTAESLRSLNAAGLSECGGRRPATSHSSGETLDNSSQHSSSS--SNAVGTRTRRKGSCGAGKIPSRGVQFSSGVDVIAEWDRHLARVNREDDAEDSRGRATITLGGDDIVSAAEDDAMGTRRSFAEAPRSISRAARLAIEGSRSGGGG--HDTIGRGGKGAGLNGYGQPLMYGMQNIIASGGRGTKGIKGSG-AGLWREEXXXXXXXXEAIPTLLDRYDGSLANLKSLVFPPSITDRPAKRLFDAGVLASTSPAKAMTATELDVIFSRLSGWKNGGGSRRRP-RRAIRTRKNAGCGXXXXDKSSCGATSREERELRRVSPDNSALSVELYALAKGERRESLLYKRAFLNTEGGSVSSRQ 513
            MD +ME  V+GVKQ   WVS PFE C    XXXXXXXXXXXXXXXX  IDLWHKDN+G TTCVTT AEGRV+V GGL KKK+ K GRLTAE+LRSLN +GLS CGGRRPA SHSSGETLDNSSQHSS S  +NAVG R+ R G+  + + PS GV+FSSGVDVIAEWD HLA VN + + ED RG ATITLGG D+VS AED   G RRSFA+APRS SRAAR AIE SR GGGG  +DTIGRGGKG G  G GQPL YGM++IIASG RG K       +GLW EEXXXXXXXXEAIPTLLDRYDGSLA+LKSLVFP SITDRP KRLFDA VLASTSPAK+MTATELDVI  RLSGWK+GGGSRRR  RRA R RK+AGCG    DKS CGA S EE +LRRVS DNSAL  EL+ALAKGERRESLL+KRAFLN EGGSVSSRQ
Sbjct:    1 MDTLMEEIVNGVKQFCQWVSKPFEVCCCPGXXXXXXXXXXXXXXXXGGIDLWHKDNSGGTTCVTTPAEGRVVVHGGLEKKKDKKIGRLTAEALRSLNPSGLSACGGRRPAASHSSGETLDNSSQHSSHSLNNNAVGIRSARNGA--SKRRPSHGVRFSSGVDVIAEWDLHLASVNHDHEEEDGRGTATITLGGADVVSVAEDPVTGPRRSFAQAPRSFSRAARFAIEYSRGGGGGVGNDTIGRGGKGVGPYGDGQPLTYGMKDIIASGDRGIKXXXXXXXSGLWGEEXXXXXXXXEAIPTLLDRYDGSLASLKSLVFPRSITDRPVKRLFDASVLASTSPAKSMTATELDVILGRLSGWKHGGGSRRRAARRATRARKSAGCGSR--DKSGCGAGSGEEGKLRRVSSDNSALRAELFALAKGERRESLLFKRAFLNAEGGSVSSRQ 442          
BLAST of mRNA_Ecto-sp13_S_contig1819.5626.1 vs. uniprot
Match: D7FI49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI49_ECTSI)

HSP 1 Score: 482 bits (1240), Expect = 2.800e-165
Identity = 302/441 (68.48%), Postives = 319/441 (72.34%), Query Frame = 0
Query:   76 MDKVMEGFVSGVKQVWAWVSNPFEFCXXXXXXXXXXXXXXXXXXXX-DIDLWHKDNNGVTTCVTTSAEGRVIVRGGLKKKNGKTGRLTAESLRSLNAAGLSECGGRRPATSHSSGETLDNSSQHSS--SSSNAVGTRTRRKGSCGAGKIPSRGVQFSSGVDVIAEWDRHLARVNREDDAEDSRGRATITLGGDDIVSAAEDDAMGTRRSFAEAPRSISRAARLAIEGSRSGGGGHDTIGRGGKGAGLNGYGQPLMYGMQNIIASGGRGTKGIKGSGAGLWREEXXXXXXXXEAIPTLLDRYDGSLANLKSLVFPPSITDRPAKRLFDAGVLASTSPAKAMTATELDVIFSRLSGWKNGGGSRRRPRRAIRTRKNAGCGXXXXDKSSCGATSREERELRRVSPDNSALSVELYALAKGERRESLLYKRAFLNTEGGSVSSRQ 513
            MD++ME FV+GVKQVWAWVSNPFE CXXXXXXXXXXXXXXXXX    DIDLWHKDNNG TTCVTT AEGRV+V GGL KKNGKTGRLTAE+LRSLN AGLSECGGRRPA SHSSGETLDNSSQHSS  SS+NAVG RTRR G    GK PSRGVQFSSGVDVIAEWDRHLARV R+DDAED RGRATITLGGDDIVS AED   G RRSFA+AP S+SRAAR A+  S        TIGRGGKG GL G GQPLMYGM++I+ASG RGTKGIKGSGAGLW+E         EAIPTLLD                                                     SGWKNGGGSRRR RRA RTRKNAG G    DKSSCGAT REE +L R SPDNSAL  EL+ALAKGERRESLL+KRAFLN EGGS  SRQ
Sbjct:    1 MDELMEDFVNGVKQVWAWVSNPFELCXXXXXXXXXXXXXXXXXDEEGDIDLWHKDNNGGTTCVTTPAEGRVVVHGGLTKKNGKTGRLTAEALRSLNPAGLSECGGRRPAASHSSGETLDNSSQHSSHSSSNNAVGIRTRRNGRGDVGKRPSRGVQFSSGVDVIAEWDRHLARVKRDDDAEDCRGRATITLGGDDIVSVAEDHVTGPRRSFAQAPCSLSRAARFAMGDSGGXXXXXGTIGRGGKGVGLKGDGQPLMYGMKDIVASGRRGTKGIKGSGAGLWKEAEDEEED--EAIPTLLD-----------------------------------------------------SGWKNGGGSRRRSRRATRTRKNAGYGDDG-DKSSCGATCREEGKLGRGSPDNSALRAELFALAKGERRESLLFKRAFLNAEGGSAFSRQ 385          
BLAST of mRNA_Ecto-sp13_S_contig1819.5626.1 vs. uniprot
Match: A0A6H5K951_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K951_9PHAE)

HSP 1 Score: 445 bits (1145), Expect = 1.060e-149
Identity = 277/484 (57.23%), Postives = 297/484 (61.36%), Query Frame = 0
Query:  123 IDLWHKDNNGVTTCVTTSAEGRVIVRGGLKKKNGKTGRLTAESLRSLNAAGLSECGGRR--------------------------------------------------------------------------------------------PATSHSSGETLDNSSQHS--SSSSNAVGTRTRRKGSCGAGKIPSRGVQFSSGVDVIAEWDRHLARVNREDDAEDSRGRATITLGGDDIVSAAEDDAMGTRRSFAEAPRSISRAARLAIEGSRSGGGGHDTIGRGGKGAGLNGYGQPLMYGMQNIIASGGRGTKGIKGSGAGLWREEXXXXXXXXEAIPTLLDRYDGSLANLKSLVFPPSITDRPAKRLFDAGVLASTSPAKAMTATELDVIFSRLSGWKNGGGSRRRPRRAIRTRKNAGCGXXXXDKSSCGATSREERELRRVSPDNSALSVELYALAKGERRESLLYKRAFLNTEGGSVSSR 512
            IDLWHKDNNG TTCVTT AEGRV+VRGGLKKKNGKTGR  AE                                                                                                             PA SHSSGETLDN+SQHS  S+SSNAVG R+RR   CGAGKIPSRG QFSSGVDVIAEWDRHLA+VNR+DDAED RGRATITLGGDDIVS AED     R SFA+APR +SRAAR AI GS SG GG DTIGRGGKGAGLN  GQPLMYGM++IIA G RGTKGIKGSGAGLWREE        EAIPTLLDRYDGSLA+L+SLVFP SITD+P KRLF+AGVLAST                           RRRPRRAIRTRKNAGCG    DKSSCG+TSREE +LRRVSPDNSAL VEL+A+ K ERR++LL KRA LN EGGSVSSR
Sbjct:   10 IDLWHKDNNGGTTCVTTPAEGRVVVRGGLKKKNGKTGRHAAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAASHSSGETLDNNSQHSGHSNSSNAVGIRSRRNARCGAGKIPSRGDQFSSGVDVIAEWDRHLAKVNRDDDAEDRRGRATITLGGDDIVSMAEDHTTELRSSFAQAPRLLSRAARFAIGGSGSGDGGDDTIGRGGKGAGLNAEGQPLMYGMKDIIAPGRRGTKGIKGSGAGLWREEEDGEEN--EAIPTLLDRYDGSLASLESLVFPQSITDQPVKRLFEAGVLAST---------------------------RRRPRRAIRTRKNAGCGGGGGDKSSCGSTSREEGKLRRVSPDNSALRVELFAITKDERRKALLSKRALLNAEGGSVSSR 464          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1819.5626.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G6S9_ECTSI8.260e-17973.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FI49_ECTSI2.800e-16568.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K951_9PHAE1.060e-14957.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1819contigEcto-sp13_S_contig1819:7685..11152 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1819.5626.1mRNA_Ecto-sp13_S_contig1819.5626.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1819 7685..11152 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1819.5626.1 ID=prot_Ecto-sp13_S_contig1819.5626.1|Name=mRNA_Ecto-sp13_S_contig1819.5626.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=514bp
GLSATFENEPQRPVDRQHGNARTASFWFCLPQSFPSLPTSPLSSRSSLPH
PTSRIPHLTSHCQHTTPAHPTVNRIMDKVMEGFVSGVKQVWAWVSNPFEF
CCCPGRRADDDDNGKSGDEEDDIDLWHKDNNGVTTCVTTSAEGRVIVRGG
LKKKNGKTGRLTAESLRSLNAAGLSECGGRRPATSHSSGETLDNSSQHSS
SSSNAVGTRTRRKGSCGAGKIPSRGVQFSSGVDVIAEWDRHLARVNREDD
AEDSRGRATITLGGDDIVSAAEDDAMGTRRSFAEAPRSISRAARLAIEGS
RSGGGGHDTIGRGGKGAGLNGYGQPLMYGMQNIIASGGRGTKGIKGSGAG
LWREEEEEEEEEDEAIPTLLDRYDGSLANLKSLVFPPSITDRPAKRLFDA
GVLASTSPAKAMTATELDVIFSRLSGWKNGGGSRRRPRRAIRTRKNAGCG
GGGGDKSSCGATSREERELRRVSPDNSALSVELYALAKGERRESLLYKRA
FLNTEGGSVSSRQ*
back to top