prot_Ecto-sp13_S_contig1819.5625.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1819.5625.1
Unique Nameprot_Ecto-sp13_S_contig1819.5625.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length400
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1819.5625.1 vs. uniprot
Match: D7FI50_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI50_ECTSI)

HSP 1 Score: 493 bits (1270), Expect = 7.690e-167
Identity = 373/406 (91.87%), Postives = 375/406 (92.36%), Query Frame = 0 
Query:    1 MSGGVPVMXXXXXXXXXXXXLVGLDGSIEQPHLAGAGSLGGGGAPATGSFSRVFSASWVAKPPLPLELAPGEVQGFVVSISPAGEPLPPRRAGGHFESPVTFVWTLAKGGAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SPTPMTSASPSAGLRLPRLRPAASAATPTTSVYLAQWQSEQRARDEVLVRVRGQPRVKLNRVFEVSLQVRNLSDSARDLVVMFTEDPAQGSRRRRGSEHQILSLDGXXXXXXXXXXPVDGSDXXXXXXGGAVKDISPSTSPGHHARGAGFGHTRSPXXXXXXXXXXXXXXXXXXXXXXXXXX-----PTCLLGDLLPVDAAVPLGRLERGAEHGATVRLTAARAGLARLSSLCLRDALTGSVYAPSYPYEVFVEG 399
            MSGGVPV XXXXXXXXXXXX  GLDGSIEQP LAGAGSLGGGGAPATGSFSRVFSASWVAKPPLPLELAPGEVQGFVVSISPAGEPLPPRRAGGHFESPVTFVWTLAKGGA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  SPTPMTSASPSAGLRLPRLRPAA  ATPTTSV+LAQWQSEQRARDEVLVRV+GQPRVKLNRVFEVSLQVRNLSDSARDLVVMFTEDPAQGSRRRRGSEHQ LSLDG XXXXXXXXX      XXXXX GGAVKDISPS SPGHH RGAGF  TRSPXXXXXXXXXXXXXXXXXXXXXXXXXX     PTCLLGDLLPVDAAVPLGRLERGAEHGATVRLTAARAGLARLSSLCLRDALTGSVY PS PYEVFVEG
Sbjct:  316 MSGGVPVXXXXXXXXXXXXXXXGLDGSIEQPPLAGAGSLGGGGAPATGSFSRVFSASWVAKPPLPLELAPGEVQGFVVSISPAGEPLPPRRAGGHFESPVTFVWTLAKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPTPMTSASPSAGLRLPRLRPAA--ATPTTSVHLAQWQSEQRARDEVLVRVKGQPRVKLNRVFEVSLQVRNLSDSARDLVVMFTEDPAQGSRRRRGSEHQYLSLDGGXXXXXXXXXXXXXXXXXXXXDGGAVKDISPSASPGHHVRGAGFSRTRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTCLLGDLLPVDAAVPLGRLERGAEHGATVRLTAARAGLARLSSLCLRDALTGSVYVPSCPYEVFVEG 719
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BLAST of mRNA_Ecto-sp13_S_contig1819.5625.1 vs. uniprot
Match: A0A6H5JW59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW59_9PHAE)

HSP 1 Score: 450 bits (1157), Expect = 2.290e-154
Identity = 349/406 (85.96%), Postives = 351/406 (86.45%), Query Frame = 0 
Query:    1 MSGGVPVMXXXXXXXXXXXXLVGLDGSIEQPHLAGAGSLGGGGAPATGSFSRVFSASWVAKPPLPLELAPGEVQGFVVSISPAGEPLPPRRAGGHFESPVTFVWTLAKGGAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPTPMTSASPSAGLRLPRLRPAASAATPTTSVYLAQWQSEQRARDEVLVRVRGQPRVKLNRVFEVSLQVRNLSDSARDLVVMFTEDPAQGSRRRRGSEHQILSLDGXXXXXXXXXXPVDGSDXXXXXXG-GAVKDISPSTSPGHHARGAGFGHTRSPXXXXXXXXXXXXXXXXXXXXXXXXXX------PTCLLGDLLPVDAAVPLGRLERGAEHGATVRLTAARAGLARLSSLCLRDALTGSVYAPSYPYEVFVEG 399
            MSGGVPV             L GLDGSIEQP L GA SLGGGGAPATGSF RVFSASWVAKPPLPLELAPGEVQGFVVSISPAGEPLPPRRAGGH ESPVTFVWTL KGGAAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    MTSASPSAGLR     P  SAATPTTSVYLAQWQSEQRARDEVLVRV+GQP+VKLNRVFEVSLQVRNLSDSARDLVVMFTEDPAQ SRRRR SEHQ LSLDGXXXXXXXXXX      XXXXXX  GAVKDISPS SPGHH RGAGFG TR  XXXXXXXXXXXXXXXXXXXXXXXXXX      PTCLLGDLLPVDAAVPLGRLERGAEHGATVRLTAARAGLARLSSLCLRDALTGSVYAPS PYEVFVEG
Sbjct:    1 MSGGVPV-------GGAFAPLEGLDGSIEQPPLVGASSLGGGGAPATGSFLRVFSASWVAKPPLPLELAPGEVQGFVVSISPAGEPLPPRRAGGHLESPVTFVWTLGKGGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-MTSASPSAGLR-----PTVSAATPTTSVYLAQWQSEQRARDEVLVRVKGQPKVKLNRVFEVSLQVRNLSDSARDLVVMFTEDPAQDSRRRRDSEHQTLSLDGXXXXXXXXXXXXXXXXXXXXXXXXGAVKDISPSASPGHHNRGAGFGRTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTCLLGDLLPVDAAVPLGRLERGAEHGATVRLTAARAGLARLSSLCLRDALTGSVYAPSCPYEVFVEG 393
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1819.5625.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FI50_ECTSI7.690e-16791.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JW59_9PHAE2.290e-15485.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1819contigEcto-sp13_S_contig1819:31..3818 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1819.5625.1mRNA_Ecto-sp13_S_contig1819.5625.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1819 1..4413 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1819.5625.1 ID=prot_Ecto-sp13_S_contig1819.5625.1|Name=mRNA_Ecto-sp13_S_contig1819.5625.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=400bp
MSGGVPVMSGGVPVGGASAPLVGLDGSIEQPHLAGAGSLGGGGAPATGSF
SRVFSASWVAKPPLPLELAPGEVQGFVVSISPAGEPLPPRRAGGHFESPV
TFVWTLAKGGAAAVAGSSDAATAAAAGAPTAASAVSSAAQRQSSSSRSSS
PTPMTSASPSAGLRLPRLRPAASAATPTTSVYLAQWQSEQRARDEVLVRV
RGQPRVKLNRVFEVSLQVRNLSDSARDLVVMFTEDPAQGSRRRRGSEHQI
LSLDGGGGGGGGGSTPVDGSDSDGDDDGGAVKDISPSTSPGHHARGAGFG
HTRSPPPPPPRETAQDAAATAAAAAAAAAAAPTCLLGDLLPVDAAVPLGR
LERGAEHGATVRLTAARAGLARLSSLCLRDALTGSVYAPSYPYEVFVEG*
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