prot_Ecto-sp13_S_contig18177.5621.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18177.5621.1
Unique Nameprot_Ecto-sp13_S_contig18177.5621.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length359
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18177.5621.1 vs. uniprot
Match: D7G361_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G361_ECTSI)

HSP 1 Score: 459 bits (1180), Expect = 7.600e-152
Identity = 324/350 (92.57%), Postives = 326/350 (93.14%), Query Frame = 0 
Query:    1 MTTSTGRPRPFLNGVFRTACNYCVSSKRGCSGGEPCDQCEKRGKPCIYAQRRKSGPRSRPASGRSSKGRSRTXXXXXXXXXXXXXXXXXXXXX---VESPSPVIARSPPSPAASGLAGEDRVGVVSGSWDGGEAVAEVMEVERRRGSIGEDAWERERRRLGFTTHDXXXXXXXXXXXXXXXXXXXXXXXRKPPALVIPRPHRTDPGSTANPLLVRSSPAPP------SGRLEVPLPPRSAHVLSPPQEGAAGSFGXXXXXXXXXXXXXXXXXXXXX-----PSPFFTRQAPSSQPSDEGNNKRTRVSSLTPHAPRTSLASPPPLSLTPSSSCSALPPRGCISSVLASRCT 336
            MTTSTGRPRPFLNGVFRTACNYCVSSKRGCSGGEPCDQCEKRGKPCIYAQRRKSGPRSRPASGRSSKGRS  XXXXXXXXXXXXXXXXXXXXX   VESPSPVIARSPPSPAASGLAGEDRVGVV+GSWDGGEA AEV EVERRRGSIGEDAWERERRRLGFTTHDXXXXXXXXXXXXXXXXXXXXXXX KPP LVIPRPHRTDPGSTANPLLVRSSPAPP      SGRLEVP+PPRSAHVLSPPQEG AGSFG XXXXXXXXXXXXXXXXXXXX     PSPFFTRQAPSSQPSDEGNNKRTRVSSLTP  PRTSLASPPPLSLTPSSSCSALPPRGCISSVLASRCT
Sbjct:    1 MTTSTGRPRPFLNGVFRTACNYCVSSKRGCSGGEPCDQCEKRGKPCIYAQRRKSGPRSRPASGRSSKGRSXXXXXXXXXXXXXXXXXXXXXXXXXXVESPSPVIARSPPSPAASGLAGEDRVGVVAGSWDGGEAAAEVTEVERRRGSIGEDAWERERRRLGFTTHDXXXXXXXXXXXXXXXXXXXXXXX-KPPDLVIPRPHRTDPGSTANPLLVRSSPAPPXXXXXXSGRLEVPMPPRSAHVLSPPQEGTAGSFGSXXXXXXXXXXXXXXXXXXXXXXXXTPSPFFTRQAPSSQPSDEGNNKRTRVSSLTPPTPRTSLASPPPLSLTPSSSCSALPPRGCISSVLASRCT 349
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18177.5621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G361_ECTSI7.600e-15292.57Zn(2)-C6 fungal-type domain-containing protein n=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 14..57
e-value: 0.0017
score: 27.6
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 18..53
e-value: 8.4E-6
score: 25.8
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 19..48
score: 8.742
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 15..80
e-value: 4.7E-6
score: 28.4
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 16..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18177contigEcto-sp13_S_contig18177:537..2345 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18177.5621.1mRNA_Ecto-sp13_S_contig18177.5621.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18177 499..2354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18177.5621.1 ID=prot_Ecto-sp13_S_contig18177.5621.1|Name=mRNA_Ecto-sp13_S_contig18177.5621.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=359bp
MTTSTGRPRPFLNGVFRTACNYCVSSKRGCSGGEPCDQCEKRGKPCIYAQ
RRKSGPRSRPASGRSSKGRSRTKARRESRAAAAAAAAVAAAAPVESPSPV
IARSPPSPAASGLAGEDRVGVVSGSWDGGEAVAEVMEVERRRGSIGEDAW
ERERRRLGFTTHDDNNHHLQQEQQQQSLFSQPAGGKRKPPALVIPRPHRT
DPGSTANPLLVRSSPAPPSGRLEVPLPPRSAHVLSPPQEGAAGSFGGSSS
SSSSSSSASSSFSSSSTPSPFFTRQAPSSQPSDEGNNKRTRVSSLTPHAP
RTSLASPPPLSLTPSSSCSALPPRGCISSVLASRCTPPPPPLLCHAWVRV
TPGKTSTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf