mRNA_Ecto-sp13_S_contig18171.5619.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18171.5619.1 vs. uniprot
Match: D7FRS4_ECTSI (MoCF_biosynth domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRS4_ECTSI) HSP 1 Score: 168 bits (426), Expect = 1.280e-47 Identity = 80/108 (74.07%), Postives = 82/108 (75.93%), Query Frame = 1
Query: 1 PSSDWMPPFMRVNPVIDWNYGQVWAFLRDFELPYCSLYDEGYTSLGEGLRTRPRDEIR---------------GASEEYLPAYMLSDWSMERAGRGERKTDSLACELR 279
PSSDWMPPFMRVNPVIDWNYGQVW FLRDFELPYCSLYDEGYTSLG T P +R G EEYLPAYMLSDWS+ERAGRGERKTDSLACELR
Sbjct: 203 PSSDWMPPFMRVNPVIDWNYGQVWGFLRDFELPYCSLYDEGYTSLGNLDNTFPNPYLRKRASSAAVSDDGGEEGIEEEYLPAYMLSDWSLERAGRGERKTDSLACELR 310
BLAST of mRNA_Ecto-sp13_S_contig18171.5619.1 vs. uniprot
Match: F0XY18_AURAN (PAPS_reduct domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY18_AURAN) HSP 1 Score: 124 bits (311), Expect = 4.590e-35 Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 1 PSSDWMPPFMRVNPVIDWNYGQVWAFLRDFELPYCSLYDEGYTSLGEGLRTRPRDEIRGASEEYLPAYMLSDWSMERAGR 240
PSSDWMPPFMRVNP++DW YG VWAFLR F+LPYC+LYD GYTSLG T + G Y PA++L DWS+ERAGR
Sbjct: 25 PSSDWMPPFMRVNPILDWTYGDVWAFLRAFDLPYCALYDGGYTSLGSAPTTSRNPALLGDGGAYKPAHLLEDWSLERAGR 104
BLAST of mRNA_Ecto-sp13_S_contig18171.5619.1 vs. uniprot
Match: A0A835ZI25_9STRA (MoaB/Mog domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI25_9STRA) HSP 1 Score: 134 bits (338), Expect = 6.200e-35 Identity = 63/104 (60.58%), Postives = 74/104 (71.15%), Query Frame = 1
Query: 1 PSSDWMPPFMRVNPVIDWNYGQVWAFLRDFELPYCSLYDEGYTSLGEGLRTRPRDEIR------GAS-----EEYLPAYMLSDWSMERAGRGERKTDSLACELR 279
PSSDWMPPFMRVNP+I+W YGQ+W FLR F+LPY SLYD GYTSLG T+ +R GAS E+Y PAYMLSDW++ERAGRG R +L C+LR
Sbjct: 215 PSSDWMPPFMRVNPIIEWEYGQIWQFLRTFDLPYPSLYDRGYTSLGNVDDTQRNPALRKRGSGDGASGNDADEDYYPAYMLSDWTLERAGRGARPESTLGCDLR 318
BLAST of mRNA_Ecto-sp13_S_contig18171.5619.1 vs. uniprot
Match: A0A7S3ZSN1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSN1_9STRA) HSP 1 Score: 127 bits (319), Expect = 2.570e-34 Identity = 56/89 (62.92%), Postives = 69/89 (77.53%), Query Frame = 1
Query: 1 PSSDWMPPFMRVNPVIDWNYGQVWAFLRDFELPYCSLYDEGYTSLGEGLRTRPRDEIRGASEEYLPAYMLSDWSMERAGRGERKTDSLA 267
PSS+WMP FMRVNP++DW+YG VW+FLR F+LPYCSLYDEGYTSLG T+ R+ ++EEY PA+ML DWS+ERAGR E+ A
Sbjct: 178 PSSEWMPAFMRVNPILDWSYGDVWSFLRTFDLPYCSLYDEGYTSLGSVSSTK-RNPALLSNEEYKPAFMLEDWSLERAGRVEKPKKKAA 265
BLAST of mRNA_Ecto-sp13_S_contig18171.5619.1 vs. uniprot
Match: A0A7S1TPJ7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPJ7_9STRA) HSP 1 Score: 131 bits (330), Expect = 8.560e-34 Identity = 60/97 (61.86%), Postives = 71/97 (73.20%), Query Frame = 1
Query: 1 PSSDWMPPFMRVNPVIDWNYGQVWAFLRDFELPYCSLYDEGYTSLGEGLRTRPRDEIR--GASEEYLPAYMLSDWSMERAGRGERKTDSLA--CELR 279
PSSDWMP FMRVNP+I+W+YG +W FLR F LPYCSLYD GYTSLG+ T P +R G+ +Y PAYMLSDWS+ERAGR R + S C+LR
Sbjct: 255 PSSDWMPAFMRVNPIIEWDYGHIWHFLRLFRLPYCSLYDVGYTSLGKKSDTWPNPALRKSGSETQYWPAYMLSDWSLERAGRSSRSSGSTTPECDLR 351
BLAST of mRNA_Ecto-sp13_S_contig18171.5619.1 vs. uniprot
Match: A0A7S1FST5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FST5_9STRA) HSP 1 Score: 130 bits (326), Expect = 3.740e-33 Identity = 60/92 (65.22%), Postives = 68/92 (73.91%), Query Frame = 1
Query: 1 PSSDWMPPFMRVNPVIDWNYGQVWAFLRDFELPYCSLYDEGYTSLGEGLRTRPRDEIR---GASEEYLPAYMLSDWSMERAGRGERKTDSLA 267
PSSDWMPPFMRVNPV+DW+YG VW FLR F+LPYCSLYDEGYTSLG+ TRP +R G Y PAYML+DW+ ERAGR +K A
Sbjct: 265 PSSDWMPPFMRVNPVLDWDYGHVWHFLRLFDLPYCSLYDEGYTSLGKIEDTRPCPALRRGDGDENGYWPAYMLADWTQERAGRISKKVKQSA 356
BLAST of mRNA_Ecto-sp13_S_contig18171.5619.1 vs. uniprot
Match: A0A7R9YFQ5_9STRA (Hypothetical protein n=3 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFQ5_9STRA) HSP 1 Score: 125 bits (315), Expect = 5.780e-33 Identity = 53/82 (64.63%), Postives = 67/82 (81.71%), Query Frame = 1
Query: 1 PSSDWMPPFMRVNPVIDWNYGQVWAFLRDFELPYCSLYDEGYTSLGEGLRTRPRDEIR--GASEEYLPAYMLSDWSMERAGR 240
PSSDWMPPFMRVNPV+DW YG +W F+R F++PY +LYD+GYTSLG+ T+P ++ G ++EYLPA MLSDWS+ERAGR
Sbjct: 253 PSSDWMPPFMRVNPVLDWEYGDIWRFIRLFQIPYVNLYDKGYTSLGKKSDTQPNPALKKPGTADEYLPADMLSDWSLERAGR 334
BLAST of mRNA_Ecto-sp13_S_contig18171.5619.1 vs. uniprot
Match: A0A7S3XQX3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQX3_HETAK) HSP 1 Score: 128 bits (321), Expect = 1.470e-32 Identity = 59/95 (62.11%), Postives = 69/95 (72.63%), Query Frame = 1
Query: 1 PSSDWMPPFMRVNPVIDWNYGQVWAFLRDFELPYCSLYDEGYTSLGEGLRTRPRDEIRGASEEYLPAYMLSDWSMERAGRGE---RKTDSLACEL 276
PSS WMPPFMRVNPV+DW+YGQVW FLR FELPY +LYD G+TSLG+ T P +R YLPAY+LSDW+ ERAGRG + SL C+L
Sbjct: 220 PSSAWMPPFMRVNPVLDWDYGQVWEFLRAFELPYPALYDRGFTSLGKMDDTFPNPALRREDGSYLPAYLLSDWTQERAGRGSGGAQAPASLDCDL 314
BLAST of mRNA_Ecto-sp13_S_contig18171.5619.1 vs. uniprot
Match: A0A7S2SEI8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEI8_9STRA) HSP 1 Score: 124 bits (310), Expect = 5.100e-32 Identity = 57/101 (56.44%), Postives = 73/101 (72.28%), Query Frame = 1
Query: 1 PSSDWMPPFMRVNPVIDWNYGQVWAFLRDFELPYCSLYDEGYTSLGEGLRT--RPR------DEIRGAS-EEYLPAYMLSDWSMERAGRGERKTDSLACEL 276
PSSDW+PPFMRVNP+++WNYG VW FLR ++LPYCSLYDEGYTSLG+ T PR D GA +LPA++L+DW+ ER+GRG+ + D A +L
Sbjct: 175 PSSDWLPPFMRVNPILNWNYGHVWQFLRSYDLPYCSLYDEGYTSLGKVSDTSHNPRLCRTGGDHNDGAPPSRFLPAFLLADWADERSGRGKTRPDHHAADL 275
BLAST of mRNA_Ecto-sp13_S_contig18171.5619.1 vs. uniprot
Match: B8BQL2_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQL2_THAPS) HSP 1 Score: 122 bits (306), Expect = 1.270e-31 Identity = 57/95 (60.00%), Postives = 66/95 (69.47%), Query Frame = 1
Query: 1 PSSDWMPPFMRVNPVIDWNYGQVWAFLRDFELPYCSLYDEGYTSLGEGLRTRPRDEIRGAS------EEYLPAYMLSDWSMERAGRGERKTDSLA 267
PSS +MPPF+RVNP+++W YG VW FLR FELPYCSLYD+GYTSLG T P ++ S EEY PAYML DWS ERAGR +K S A
Sbjct: 157 PSSHYMPPFLRVNPILNWTYGHVWHFLRVFELPYCSLYDDGYTSLGTVKDTLPCPALKKGSNDTNGGEEYWPAYMLKDWSQERAGRVSKKKQSTA 251 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18171.5619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18171.5619.1 >prot_Ecto-sp13_S_contig18171.5619.1 ID=prot_Ecto-sp13_S_contig18171.5619.1|Name=mRNA_Ecto-sp13_S_contig18171.5619.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=89bp MPPFMRVNPVIDWNYGQVWAFLRDFELPYCSLYDEGYTSLGEGLRTRPRDback to top mRNA from alignment at Ecto-sp13_S_contig18171:30..1034+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18171.5619.1 ID=mRNA_Ecto-sp13_S_contig18171.5619.1|Name=mRNA_Ecto-sp13_S_contig18171.5619.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1005bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18171:30..1034+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18171:30..1034+ >mRNA_Ecto-sp13_S_contig18171.5619.1 ID=mRNA_Ecto-sp13_S_contig18171.5619.1|Name=mRNA_Ecto-sp13_S_contig18171.5619.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=267bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18171:30..1034+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |