prot_Ecto-sp13_S_contig1817.5617.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1817.5617.1
Unique Nameprot_Ecto-sp13_S_contig1817.5617.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length201
Homology
BLAST of mRNA_Ecto-sp13_S_contig1817.5617.1 vs. uniprot
Match: D7FQV7_ECTSI (Trafficking protein particle complex subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQV7_ECTSI)

HSP 1 Score: 384 bits (986), Expect = 1.130e-134
Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0
Query:    1 MDSAKRASAPRTHILDRQIVAAGKGGKPAEVSLSAFSFLFSEMVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSNVWKALFGKTADSLERSTENEDEYMIHEREPMTNSFVSVPADLGQLNCAALVAGVIAGVLDGASFPARVSAHNVEMEKGQRDKTVFLIKFDPEVLAREARLG 200
            MDSAKRASAPRTHILDRQIVAAGKGGKPAEVSLSAFSFLFSEMVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSNVWKALFGKTADSLERSTENEDEYMIHEREPMTNSFVSVPADLGQLNCAALVAGVIAGVLDGASFPARVSAHNVEMEKGQR+KTVFLIKFDPEVLAREARLG
Sbjct:    1 MDSAKRASAPRTHILDRQIVAAGKGGKPAEVSLSAFSFLFSEMVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSNVWKALFGKTADSLERSTENEDEYMIHEREPMTNSFVSVPADLGQLNCAALVAGVIAGVLDGASFPARVSAHNVEMEKGQREKTVFLIKFDPEVLAREARLG 200          
BLAST of mRNA_Ecto-sp13_S_contig1817.5617.1 vs. uniprot
Match: W7TEN4_9STRA (Trafficking protein particle complex subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEN4_9STRA)

HSP 1 Score: 255 bits (652), Expect = 1.070e-83
Identity = 131/188 (69.68%), Postives = 157/188 (83.51%), Query Frame = 0
Query:   13 HILDRQIVAAGKGGKPAEVSLSAFSFLFSEMVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSNVWKALFGKTADSLERSTENEDEYMIHEREPMTNSFVSVPADLGQLNCAALVAGVIAGVLDGASFPARVSAHNVEMEKGQRDKTVFLIKFDPEVLAREARLG 200
            +ILDR +   G+G   +EVSLSAFSFLFSEMVQY+Q+RV SIADLERKLEEAGYG+G RVLEL  FRE+  +R ++L+ +LQ+VSS VWKALF K ADSLERSTENEDEYMIHEREP+TN FVS PAD+ QLNCAA +AG+I+GVL+GAS+PA V+AH+V +  GQR+KTVFLIKF  +VL REA L 
Sbjct:   19 NILDRPLATKGRGVGGSEVSLSAFSFLFSEMVQYYQNRVLSIADLERKLEEAGYGVGHRVLELLAFREKQYRREIKLIGVLQFVSSTVWKALFNKVADSLERSTENEDEYMIHEREPITNVFVSAPADISQLNCAAYIAGIISGVLNGASYPAGVTAHHVAIGDGQREKTVFLIKFRQDVLRREAALS 206          
BLAST of mRNA_Ecto-sp13_S_contig1817.5617.1 vs. uniprot
Match: A0A6V1NSM5_HETAK (Trafficking protein particle complex subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NSM5_HETAK)

HSP 1 Score: 249 bits (635), Expect = 2.250e-81
Identity = 133/189 (70.37%), Postives = 154/189 (81.48%), Query Frame = 0
Query:   13 HILDRQIVAAGKGGKPAEVSLSAFSFLFSEMVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSNVWKALFGKTADSLERSTENEDEYMIHEREPMTNSFVSVPADLGQLNCAALVAGVIAGVLDGASFPARVSAHNVEMEKG-QRDKTVFLIKFDPEVLAREARLG 200
            +ILDR +    K     EVSLSAFSFLFSEMVQY Q+RV SI+DLE++LEE GY +GLRVLEL   RER Q+RRVRLLP LQ+VS+NVWK LFGK ADSLERSTENEDEYMIHE EP+ N+F+SVP DLG LNCAA  AGV+AG LDGASFPARV+AH V +E G +R+KTVFL+KFD EV+ RE +LG
Sbjct:    6 NILDRPVPKINK-----EVSLSAFSFLFSEMVQYNQNRVMSISDLEKRLEEVGYRVGLRVLELLGHRERAQRRRVRLLPTLQFVSTNVWKYLFGKQADSLERSTENEDEYMIHEAEPLPNAFISVPPDLGHLNCAAFTAGVVAGALDGASFPARVTAHGVAVEGGPRREKTVFLVKFDREVVDREIKLG 189          
BLAST of mRNA_Ecto-sp13_S_contig1817.5617.1 vs. uniprot
Match: A0A2D4CHI7_PYTIN (Trafficking protein particle complex subunit n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CHI7_PYTIN)

HSP 1 Score: 233 bits (595), Expect = 3.660e-75
Identity = 124/199 (62.31%), Postives = 153/199 (76.88%), Query Frame = 0
Query:    1 MDSAKRASAPRT---HILDRQIVAAGKGGKPAEVSLSAFSFLFSEMVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSNVWKALFGKTADSLERSTENEDEYMIHEREPMTNSFVSVPADLGQLNCAALVAGVIAGVLDGASFPARVSAHNVEMEKGQRDKTVFLIKFDPEVLARE 196
            MD A+R+    T   HILDR + + GKG    EVSLSAF+FLFSEMVQYFQ RV +I DLE +L++AG+G+G+RVLEL  FRE+  +R  RL+ MLQ++ S  W+ALFGK AD+LERSTENEDEYMIHE EP+TN F+SVP DLGQL+CAA +AG+I G+L    FPA+V+AH VE   GQRDKTVFL+KFD  V+ RE
Sbjct:    1 MDPARRSGLGATTKLHILDRPL-SRGKG----EVSLSAFAFLFSEMVQYFQGRVQNITDLETRLDDAGFGVGVRVLELLCFREKSGRRETRLINMLQFIVSTCWRALFGKAADALERSTENEDEYMIHELEPLTNKFISVPQDLGQLDCAAFIAGMIRGILTSGGFPAQVTAHAVETGAGQRDKTVFLVKFDEVVIRRE 194          
BLAST of mRNA_Ecto-sp13_S_contig1817.5617.1 vs. uniprot
Match: A0A836CAJ0_9STRA (Transport protein particle component n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAJ0_9STRA)

HSP 1 Score: 234 bits (598), Expect = 3.790e-75
Identity = 132/225 (58.67%), Postives = 155/225 (68.89%), Query Frame = 0
Query:   11 RTHILDRQIVAAGK-------------------------GGKPAEVSLSAFSFLFSEMVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRER-LQKRRVRLLPMLQWVSSNVWKALFGKTADSLERSTENEDEYMIHEREPMTNSFVSVPADLGQLNCAALVAGVIAGVLDGASFPARVSAHNVEMEK---------GQRDKTVFLIKFDPEVLAREARLG 200
            R HILDR+I   G                          GG+  EVSLSAFSFL SEMVQ+ Q RVTSI  LER+LEEAGY +GLRVLELQ FR++ + KR+ RLL  LQWVS+++W+ALFGKTADSLERSTEN DEYMIHE +P+TN FVSVP DLGQLNCAA +AG+IAG LDGA FPA V+AH +E+           G R KTVFL+KF  EV+ REA+L 
Sbjct:    7 RLHILDRKIAVPGSSYAYPTTRDTRVGIVSASSNAYAAAGGRTTEVSLSAFSFLLSEMVQHVQARVTSIDALERRLEEAGYAVGLRVLELQQFRDKSVGKRKTRLLQALQWVSADMWRALFGKTADSLERSTENADEYMIHELQPITNVFVSVPPDLGQLNCAAYIAGIIAGALDGACFPATVTAHTIELAGQEANITAAGGPRCKTVFLVKFSEEVMRREAQLA 231          
BLAST of mRNA_Ecto-sp13_S_contig1817.5617.1 vs. uniprot
Match: A0A5D6XYF3_9STRA (Trafficking protein particle complex subunit n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYF3_9STRA)

HSP 1 Score: 233 bits (593), Expect = 7.130e-75
Identity = 121/192 (63.02%), Postives = 150/192 (78.12%), Query Frame = 0
Query:    8 SAPRTHILDRQIVAAGKGGKPAEVSLSAFSFLFSEMVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSNVWKALFGKTADSLERSTENEDEYMIHEREPMTNSFVSVPADLGQLNCAALVAGVIAGVLDGASFPARVSAHNVEMEKGQRDKTVFLIKFDPEVLAREARL 199
            +A + HILDR +      GK +EVSLSAF+FLFSEMVQYFQ RV +I+DLE +L++AG+G+G+RV+EL   RE+  +R  RL+ MLQ++ S  WKALFGK AD+LERSTENEDEYMIHE EP+TN F+SVP DLGQL+CAA +AGV+ GVL  + FPA+VSAH VE   GQRDKTVFL+KFD  V+ RE  L
Sbjct:   10 AATKLHILDRPL----SRGK-SEVSLSAFAFLFSEMVQYFQSRVQNISDLESRLDDAGFGVGVRVIELLCHREKPGRRETRLINMLQFIVSTCWKALFGKPADALERSTENEDEYMIHELEPLTNKFISVPPDLGQLDCAAYIAGVVRGVLTSSGFPAQVSAHAVEAATGQRDKTVFLVKFDESVMRRERTL 196          
BLAST of mRNA_Ecto-sp13_S_contig1817.5617.1 vs. uniprot
Match: A0A8K1FTE9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FTE9_PYTOL)

HSP 1 Score: 224 bits (570), Expect = 2.300e-71
Identity = 117/186 (62.90%), Postives = 144/186 (77.42%), Query Frame = 0
Query:   11 RTHILDRQIVAAGKGGKPAEVSLSAFSFLFSEMVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSNVWKALFGKTADSLERSTENEDEYMIHEREPMTNSFVSVPADLGQLNCAALVAGVIAGVLDGASFPARVSAHNVEMEKGQRDKTVFLIKFDPEVLARE 196
            + HILDR + + GK     EVSLSAF+FLFSEMVQYFQ RV +I DLE +L++AG+G+G+R+ EL   RE+  +R  RL+ MLQ+V S  WKALFGK AD+LERSTENEDEYMIHE EP+TN F+SVP DLGQL+CAA +AG+I G+L    FPA+V+AH VE   GQRDKTVFL+KFD  V+ RE
Sbjct:   14 KLHILDRPL-SRGKN----EVSLSAFAFLFSEMVQYFQGRVQNINDLETRLDDAGFGVGVRIQELLCQREKAGRRETRLINMLQFVVSTCWKALFGKAADALERSTENEDEYMIHEVEPLTNKFISVPPDLGQLDCAAYIAGMIRGILTSGGFPAQVTAHAVEAGNGQRDKTVFLVKFDEVVMRRE 194          
BLAST of mRNA_Ecto-sp13_S_contig1817.5617.1 vs. uniprot
Match: M4BVJ4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BVJ4_HYAAE)

HSP 1 Score: 223 bits (568), Expect = 8.600e-70
Identity = 117/196 (59.69%), Postives = 149/196 (76.02%), Query Frame = 0
Query:    1 MDSAKRASAPRTHILDRQIVAAGKGGKPAEVSLSAFSFLFSEMVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSNVWKALFGKTADSLERSTENEDEYMIHEREPMTNSFVSVPADLGQLNCAALVAGVIAGVLDGASFPARVSAHNVEMEKGQRDKTVFLIKFDPEVLARE 196
            M+  +  S    HILDR +      GK +EVSLS FSFLFSEMVQYFQ RV +I+DLE +L+ AG+G+G+RVLE+   RE+  +R +RLL MLQ++ SN WKALFGK AD+LERSTENE+EYMIHE EP+TN FVSVP DLGQL+CAA +AG++ G+L  + F A V+AH VE+  GQR+KTVFL+KF+  V+ RE
Sbjct:   96 MEGGRGVSTTNLHILDRPL----SRGK-SEVSLSVFSFLFSEMVQYFQGRVQNISDLENRLDIAGFGVGVRVLEILGHREKSGRREIRLLAMLQFIVSNCWKALFGKAADALERSTENENEYMIHELEPLTNKFVSVPPDLGQLDCAAYIAGIVRGILCSSGFLADVTAHTVEVPGGQRNKTVFLVKFNESVIHRE 286          
BLAST of mRNA_Ecto-sp13_S_contig1817.5617.1 vs. uniprot
Match: K3XAK0_GLOUD (Trafficking protein particle complex subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAK0_GLOUD)

HSP 1 Score: 218 bits (556), Expect = 4.850e-69
Identity = 117/199 (58.79%), Postives = 146/199 (73.37%), Query Frame = 0
Query:    8 SAPRTHILDR---------QIVAAGKGGKPAEVSLSAFSFLFSEMVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSNVWKALFGKTADSLERSTENEDEYMIHEREPMTNSFVSVPADLGQLNCAALVAGVIAGVLDGASFPARVSAHNVEM-EKGQRDKTVFLIKFDPEVLARE 196
            +A + HILDR          ++A  +      VSLSAFSFLFSEMVQYFQ RV +I+DLE +L++AG+G+G+RV EL   RE+  +R  RL+ +LQ++ S  WKALFGK AD+LERSTENEDEYMIHE EP+TN F+SVP DLGQL+CAA +AG+I GVL  + F A V+AH VE+   GQRDKTVFLIKFD  V+ RE
Sbjct:   10 TATKLHILDRPLSRGKNEVHVLALMRHTHTQSVSLSAFSFLFSEMVQYFQGRVQNISDLENRLDDAGFGVGVRVGELLCHREKSGRRETRLISILQFIVSTCWKALFGKAADALERSTENEDEYMIHELEPLTNKFISVPPDLGQLDCAAYIAGIIRGVLTSSGFTANVTAHTVEVGTPGQRDKTVFLIKFDERVMRRE 208          
BLAST of mRNA_Ecto-sp13_S_contig1817.5617.1 vs. uniprot
Match: H3G9X2_PHYRM (Trafficking protein particle complex subunit n=26 Tax=Peronosporaceae TaxID=4777 RepID=H3G9X2_PHYRM)

HSP 1 Score: 217 bits (552), Expect = 8.150e-69
Identity = 109/168 (64.88%), Postives = 135/168 (80.36%), Query Frame = 0
Query:   29 AEVSLSAFSFLFSEMVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSNVWKALFGKTADSLERSTENEDEYMIHEREPMTNSFVSVPADLGQLNCAALVAGVIAGVLDGASFPARVSAHNVEMEKGQRDKTVFLIKFDPEVLARE 196
            +EVSLSAFSFLFSEMVQYFQ RV +I+DLE +L+ AG+G+G+RV+EL   RE+  +R  RLL MLQ++ S  WKALFGK AD+LERSTENE EYMIHE EP+TN FVSVP DLGQL+CAA +AG++ G+L  + + A V+AH VE+  GQRDKTVFL+KFD  V+ RE
Sbjct:   14 SEVSLSAFSFLFSEMVQYFQGRVQNISDLENRLDGAGFGVGVRVVELLCHREKSGRRETRLLAMLQFIVSTCWKALFGKAADALERSTENEYEYMIHELEPLTNKFVSVPPDLGQLDCAAYIAGIVRGILCSSGYLAEVTAHTVEVPGGQRDKTVFLVKFDESVIRRE 181          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1817.5617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQV7_ECTSI1.130e-13499.50Trafficking protein particle complex subunit n=2 T... [more]
W7TEN4_9STRA1.070e-8369.68Trafficking protein particle complex subunit n=2 T... [more]
A0A6V1NSM5_HETAK2.250e-8170.37Trafficking protein particle complex subunit n=1 T... [more]
A0A2D4CHI7_PYTIN3.660e-7562.31Trafficking protein particle complex subunit n=1 T... [more]
A0A836CAJ0_9STRA3.790e-7558.67Transport protein particle component n=1 Tax=Tribo... [more]
A0A5D6XYF3_9STRA7.130e-7563.02Trafficking protein particle complex subunit n=1 T... [more]
A0A8K1FTE9_PYTOL2.300e-7162.90Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BVJ4_HYAAE8.600e-7059.69Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
K3XAK0_GLOUD4.850e-6958.79Trafficking protein particle complex subunit n=1 T... [more]
H3G9X2_PHYRM8.150e-6964.88Trafficking protein particle complex subunit n=26 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1380.20coord: 29..200
e-value: 1.6E-68
score: 231.2
IPR016696TRAPP I complex, subunit 5PIRSFPIRSF017479TRAPP_1_Trs31coord: 1..200
e-value: 6.7E-70
score: 232.8
IPR016696TRAPP I complex, subunit 5PANTHERPTHR2090241-2 PROTEIN ANTIGEN-RELATEDcoord: 27..199
IPR007194Transport protein particle (TRAPP) componentPFAMPF04051TRAPPcoord: 36..189
e-value: 1.0E-40
score: 138.9
IPR024096NO signalling/Golgi transport ligand-binding domain superfamilySUPERFAMILY111126Ligand-binding domain in the NO signalling and Golgi transportcoord: 30..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1817contigEcto-sp13_S_contig1817:6598..9461 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1817.5617.1mRNA_Ecto-sp13_S_contig1817.5617.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1817 6219..10320 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1817.5617.1 ID=prot_Ecto-sp13_S_contig1817.5617.1|Name=mRNA_Ecto-sp13_S_contig1817.5617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=201bp
MDSAKRASAPRTHILDRQIVAAGKGGKPAEVSLSAFSFLFSEMVQYFQDR
VTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSNV
WKALFGKTADSLERSTENEDEYMIHEREPMTNSFVSVPADLGQLNCAALV
AGVIAGVLDGASFPARVSAHNVEMEKGQRDKTVFLIKFDPEVLAREARLG
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016696TRAPP-I_su5
IPR007194TRAPP_component
IPR024096NO_sig/Golgi_transp_ligand-bd