mRNA_Ecto-sp13_S_contig18169.5615.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18169.5615.1
Unique NamemRNA_Ecto-sp13_S_contig18169.5615.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: D8LU13_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU13_ECTSI)

HSP 1 Score: 449 bits (1155), Expect = 2.970e-155
Identity = 235/280 (83.93%), Postives = 247/280 (88.21%), Query Frame = 1
Query:    1 RCVRTGSHCRYSKRRWHLPQPHGQEQHQLRA----------VLLQSSSSGALVSAARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEALFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQLQKKSSSDEEQGIPQVCESV 810
            RCVRTGS+C YSKRRWHLPQPHGQ QHQ R           VLLQSS   ALVS+ARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMV+IMATP TLQRPAVGGGCDEEALFDAIARG DLI ASEGHQ PMNPRSCTFWCAIALGALAKGS F+SVAKYSQLAHEAL +  SGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFR+SI+RGS + LPVGFAEVVS TAF DPC GQ Q+KSSS EEQG+PQ+ E+V
Sbjct:   45 RCVRTGSNCTYSKRRWHLPQPHGQ-QHQPRPSRRDRTHRKEVLLQSSPPEALVSSARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVQIMATPATLQRPAVGGGCDEEALFDAIARGEDLINASEGHQHPMNPRSCTFWCAIALGALAKGSPFESVAKYSQLAHEALAKSKSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRSSIDRGSTDNLPVGFAEVVSFTAFDDPCGGQRQRKSSSAEEQGMPQLNEAV 323          
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: A0A6H5JYW4_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 8.990e-86
Identity = 154/277 (55.60%), Postives = 184/277 (66.43%), Query Frame = 1
Query:    1 RCVRTGSHCRYSKRRWHLPQPHGQEQHQLRAV---------LLQSSSSGALVSAARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEALFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQLQKKSSSDEEQGIPQVCE 804
            RCV +G  C Y  RRWHL +PH Q+QHQ +           +LQS+  GALV+   LPLKR RLSASPA GLVGMQE+AFLSDFFGCVGF+PLT+ S IRE MV IMA+P  LQ+ A+GG C E      + R     +ASE +Q PM+  +CTFWCAIALGALAKGS  +SVAKY  LAHEAL +      DAEVA AWAMLAY++GFMGDL R QEY A+SES  + +  +G    LP+GFAEVV      +  CGQ + KS   EE   PQV +
Sbjct:   51 RCVGSGGQCAYIMRRWHLLKPH-QQQHQSQRPDRDGAHGREVLQSAQPGALVTCGMLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVRIMASPAPLQQSAIGGACSE---VGTMVRAPCWNEASERNQLPMDASTCTFWCAIALGALAKGSPVESVAKYRHLAHEALTKSYPSSTDAEVATAWAMLAYMYGFMGDLARFQEYLALSESCLKCATAKGFVNTLPLGFAEVVLPVKIPNASCGQWETKSLDAEEYVPPQVAD 323          
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: D8LU10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU10_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 2.050e-82
Identity = 136/205 (66.34%), Postives = 156/205 (76.10%), Query Frame = 1
Query:  196 MQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEALFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQLQKKSSSDEEQGIPQVCESV 810
            M+ES FLSDFFGCVGFLPLTT+S IRE MVE+M  P  LQ+PA+ G  DEE  F  I R A+  KAS+ +Q PMNP+SCTFWCAIALGA+AKG+  +SV KYSQLA EAL +  SGPADAEVAKAWAMLAYL GFMGDL R+QEY AVSES FR+S+E GS   LP+GFAEVV  T   D CCGQ Q   SS EEQ +PQ+ E+ 
Sbjct:    1 MEESVFLSDFFGCVGFLPLTTQSHIRETMVEMMTAPAPLQQPAIAGIWDEETRFSEIERRANCRKASDVNQLPMNPQSCTFWCAIALGAVAKGNPVESVEKYSQLAQEALPKSVSGPADAEVAKAWAMLAYLCGFMGDLARYQEYLAVSESFFRSSVEHGSTGTLPLGFAEVVKFTEVSDSCCGQRQINWSSGEEQAMPQLNEAA 205          
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: D8LCV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV4_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 2.370e-80
Identity = 128/218 (58.72%), Postives = 156/218 (71.56%), Query Frame = 1
Query:  142 LPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEA-LFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQLQKKSSSDEEQGIP 792
            LP KR RLSASPA GLV MQE+ FLSDFFGC+GFLPLTT S IRE MV+IM  P + Q+   G G D+    F+A+A G DL K S G Q PM+P +CTFWCA+ALGAL KGS  +SV  Y+QLA EAL + NSGP DAEVAKAW +LA LHGFMGD ER ++Y A+S+S  R+SIE+GS + LPVGFAE+V      +  CG+ Q  S   +E+ +P
Sbjct:    2 LPFKRCRLSASPATGLVEMQENTFLSDFFGCIGFLPLTTPSQIRETMVKIMVPPASSQQSVFGDGSDKRGHYFEAVAPGGDLSKISAGSQLPMDPSACTFWCAVALGALVKGSPIESVTSYAQLAQEALAKSNSGPGDAEVAKAWVILANLHGFMGDKERFEKYLALSDSFLRSSIEQGSIDTLPVGFAEIVKFKDIANVSCGKWQMGSFPVQEETLP 219          
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: D8LCV1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV1_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 2.010e-79
Identity = 130/218 (59.63%), Postives = 156/218 (71.56%), Query Frame = 1
Query:  142 LPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEA-LFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQLQKKSSSDEEQGIP 792
            LP KR RLSASPA GLVGMQE+AFLSDFFGCVGFLPLTT S IRE MV IM    + Q+   G  CDE    F+A+A G DL K S  +QFPM+P +CTFWCA+ALGALAKGS  +SV  Y+QLA EAL + NSGP DAEVAKAW +LA LHGFMG  ER ++Y A+S+S  R+SIE+GS + LPVGFAE+V      +  CG+ Q +S   + +  P
Sbjct:    6 LPFKRCRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRETMVTIMLPRASSQQSVFGDDCDEGGHYFEAVAPGGDLSKTSARNQFPMDPSACTFWCAVALGALAKGSPIESVTSYAQLAQEALAKSNSGPGDAEVAKAWVILANLHGFMGHKERFEKYLALSDSFLRSSIEQGSIDTLPVGFAEIVKFKDIANVSCGKWQVESFPVQGENFP 223          
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: D7FZI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI7_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 7.020e-79
Identity = 129/205 (62.93%), Postives = 149/205 (72.68%), Query Frame = 1
Query:  196 MQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEALFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQLQKKSSSDEEQGIPQVCESV 810
            MQESAFLSDFFGCVGF PL T+S IR +MV+IM T   LQ  AVGG   E+  FDAI RGAD  KASEGHQ PMNP SCTFWCAIALGAL KG    SV KYSQLAHEAL + NS PAD EVAKAWA+LAYLHG+MGDL ++Q+Y A+SES  R+  + GS + LPVGF+EVV+     D CC +   KS   EE+ I Q+ E+ 
Sbjct:    1 MQESAFLSDFFGCVGFFPLATQSEIRASMVKIMTT---LQSSAVGGDFGEQGRFDAIVRGADWSKASEGHQIPMNPSSCTFWCAIALGALVKGHPIGSVTKYSQLAHEALAKSNSAPADVEVAKAWAILAYLHGWMGDLAQYQQYLALSESYVRSFSKHGSTDALPVGFSEVVTYAEISDSCCEERLMKSFVTEEESIFQLNEAA 202          
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: D8LU09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU09_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 4.480e-71
Identity = 126/221 (57.01%), Postives = 155/221 (70.14%), Query Frame = 1
Query:  142 LPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEALFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQLQKKSSSDEEQGIPQVCE 804
            LPLKR RL+ASPA GLVGMQE+AFLSDFFGCVGF+PLT+ S IRE MV+IMA+P  LQ+ A+GG         ++ R     KASE  Q PM+P +CTFWCAIALGALAKG   +SVAKY  LAHEAL +     ADAEVA AWAMLAY++GFMGDL + QEY A+SES  +++  +   + LP+GFAEVV      +  CGQ + KS   EE+  PQ+ +
Sbjct:    2 LPLKRFRLTASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVKIMASPAPLQQSAIGGAFGG---VGSMVRARCWNKASEKPQLPMDPSTCTFWCAIALGALAKGCPVESVAKYRHLAHEALTKSYPSSADAEVATAWAMLAYVYGFMGDLAKFQEYLALSESFLKSATAKRCTDTLPLGFAEVVLPVKIPNASCGQWETKSLDAEERVPPQLAD 219          
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: D8LU07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU07_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 6.330e-71
Identity = 119/200 (59.50%), Postives = 147/200 (73.50%), Query Frame = 1
Query:  196 MQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEALFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLT-AFVDPCCGQLQKKSSSDEEQGIP 792
            M+E+AFLSDFFGCVGFLPLTT+S IRE MV+IM +P +LQ+ AV   CD+E  +DAIARGA  I+ASE +Q P +P +CTFWCAIALGALA+GS  QSV KYS+LA EAL    SGPA+ EVAKAW +LAYL  FM D+   Q+Y A+S++     IE+GSA+MLPVGFA++V L  A +  C  Q Q KS   +EQ  P
Sbjct:    1 MEENAFLSDFFGCVGFLPLTTKSHIRETMVKIMRSPASLQQSAVEADCDDERSYDAIARGAHWIQASERNQLPRDPSTCTFWCAIALGALAEGSPIQSVYKYSELAQEALATSGSGPANVEVAKAWVILAYLCCFMEDMVGFQDYLALSDAFVTRCIEQGSADMLPVGFADIVKLKYAALSSCGQQWQMKSYRSKEQATP 200          
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: D8LCW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW5_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 1.160e-66
Identity = 112/200 (56.00%), Postives = 140/200 (70.00%), Query Frame = 1
Query:  196 MQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEA-LFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQLQKKSSSDEEQGIP 792
            MQE+AFLSDFFGC GFLPL T S IRE MV+IM  P + Q+P +G  CDE    F+A+ARG DL K S G++ PM+P +CTFWCA+ALGALAKGS  +SV  Y++LA  AL   NS PAD EVAKAW +LA LHGFMGD+E  ++Y A+S+S   +SIE GS + LPVGFAE+V    F +  CG+   +  S +E   P
Sbjct:    1 MQENAFLSDFFGCNGFLPLATPSHIRETMVKIMLPPASSQQPVLGDDCDEGGHYFEAVARGGDLSKTSAGNRLPMDPSACTFWCAVALGALAKGSPIESVTSYARLAQAALANSNSDPADTEVAKAWVILANLHGFMGDMEGFEKYLALSDSFVTSSIEEGSTDALPVGFAEIVKFKEFANASCGEWPLECFSVQENNPP 200          
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 8.510e-65
Identity = 130/260 (50.00%), Postives = 158/260 (60.77%), Query Frame = 1
Query:    1 RCVRTGSHCRYSKRRWHLPQPHGQEQHQLR---------AVLLQSSSSGALVSAARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEALFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQL 753
            RC+R+G  C YSKR+ H PQ   Q QHQ R           LL+ SSSGAL ++  LPLKR RLSASPA GLVGMQE+AFLSDFFGCVGFLPLTT S IR  MV +M       +        E+  FDAI     +   + G Q    P +CTFWCA+ +GAL  GS  + V  YS LA +AL+   +GP +AEVAKAWA+L Y +GFMGD    QEY  +S+S    SIERGS ++LP GFAE++     V    G L
Sbjct:   40 RCLRSGVQCTYSKRKPHQPQT--QHQHQRRPRGPACMPSTELLRHSSSGALQASGMLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHQLGASYDSPEQCQFDAILTEDGI---TTGSQLSTGPSACTFWCAVGVGALVNGSPVELVGNYSGLARDALN-AYTGPVNAEVAKAWAILGYFYGFMGDTTTFQEYLGLSDSFLTDSIERGSTDILPAGFAEIIRHKQTVKVYAGNL 293          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU13_ECTSI2.970e-15583.93Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JYW4_9PHAE8.990e-8655.60Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU10_ECTSI2.050e-8266.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCV4_ECTSI2.370e-8058.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCV1_ECTSI2.010e-7959.63Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7FZI7_ECTSI7.020e-7962.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU09_ECTSI4.480e-7157.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU07_ECTSI6.330e-7159.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCW5_ECTSI1.160e-6656.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBJ1_9PHAE8.510e-6550.00Zn(2)-C6 fungal-type domain-containing protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18169contigEcto-sp13_S_contig18169:321..2688 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size810
Hectar predicted targeting categoryother localisation
Exons7
Cds size810
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18169.5615.1prot_Ecto-sp13_S_contig18169.5615.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18169 321..2688 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462937.7903666-CDS-Ecto-sp13_S_contig18169:320..4341681462937.7903666-CDS-Ecto-sp13_S_contig18169:320..434Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18169 321..434 -
1681462937.8010917-CDS-Ecto-sp13_S_contig18169:714..7981681462937.8010917-CDS-Ecto-sp13_S_contig18169:714..798Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18169 715..798 -
1681462937.8108835-CDS-Ecto-sp13_S_contig18169:1033..10791681462937.8108835-CDS-Ecto-sp13_S_contig18169:1033..1079Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18169 1034..1079 -
1681462937.8208072-CDS-Ecto-sp13_S_contig18169:1298..13751681462937.8208072-CDS-Ecto-sp13_S_contig18169:1298..1375Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18169 1299..1375 -
1681462937.8302536-CDS-Ecto-sp13_S_contig18169:1568..17941681462937.8302536-CDS-Ecto-sp13_S_contig18169:1568..1794Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18169 1569..1794 -
1681462937.8402169-CDS-Ecto-sp13_S_contig18169:2013..21211681462937.8402169-CDS-Ecto-sp13_S_contig18169:2013..2121Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18169 2014..2121 -
1681462937.849454-CDS-Ecto-sp13_S_contig18169:2533..26881681462937.849454-CDS-Ecto-sp13_S_contig18169:2533..2688Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18169 2534..2688 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18169.5615.1

>prot_Ecto-sp13_S_contig18169.5615.1 ID=prot_Ecto-sp13_S_contig18169.5615.1|Name=mRNA_Ecto-sp13_S_contig18169.5615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=270bp
RCVRTGSHCRYSKRRWHLPQPHGQEQHQLRAVLLQSSSSGALVSAARLPL
KRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMAT
PNTLQRPAVGGGCDEEALFDAIARGADLIKASEGHQFPMNPRSCTFWCAI
ALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGF
MGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQ
LQKKSSSDEEQGIPQVCESV
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mRNA from alignment at Ecto-sp13_S_contig18169:321..2688-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18169.5615.1 ID=mRNA_Ecto-sp13_S_contig18169.5615.1|Name=mRNA_Ecto-sp13_S_contig18169.5615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2368bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18169:321..2688- (Ectocarpus species13 EcNAP12_S_4_19m)
CGCTGCGTGCGGACAGGCAGCCATTGCAGGTACAGCAAACGGCGGTGGCA TCTCCCTCAACCGCACGGTCAAGAACAACATCAGCTTAGAGCAGTCCTGC TTCAATCCTCATCATCTGGGGCACTGGTGTCAGCCGCTAGGTTGCCGCTG AAGAGGTGAAGTAGCTCACGCGTGTCCCATTTGCTATTGAAGATTCAAGA GAACATGATGACCAAGAACCTATGCGTACATACGTCGAGTGCTTGCTCTC ACATTGTGTCTCAGTGCATCGCGTGTTTGGCAATGCTGAAATGAGGCGTT GTGTCTTTCAATGGAATCCTACTCTGGGGTAGCCCACAACCGCCTGTCCC CTCGTGTTTGCATTTACTCATGGTTGACCGGTGCGATCAGCGGCGAAATT CCGAAGACCCAGGTGTCTATTTTTAGTGACATTCGCGGAATGATAACCAA CCGACTAGTTGGCCAAACTAGCCAACCAGAGCACCCGGTCAGGAGAAAGC CCGAGGCATGTTTCACAACATCATCCAGAGTATTTATTCTCCCTCGGCAC TCTGCTGCTACATCCAGGCTTAGGCTGAGTGCGTCTCCGGCGGTTGGGCT CGTGGGAATGCAGGAGAGCGCCTTCCTGAGCGACTTCTTCGGCTGCGTTG GGTTTCTCCCACTTACCACGCGGAGGTATCGCATCTAGGTTGCTTGGAAG ATAGAAGTAGTGAAAGTGAGGCCAGGAGAGATCATTTCGTTCTACGCCGC AATTGAGCAGTTTGCCGAGTTCATTGAAACAGGATGGACGTGGCCTTGTG TTGAGGTGGATGTATGGTGCTGGTGGTGCCCCTGCTGCTCCACAACGTCG TCCGACACGTGGCACTTTCGCGGTGTTTGTGTTGTGTTGACCAGTACCAT TCGCGAGGCTATGGTGGAAATCATGGCAACCCCGAACACTCTACAGCGGC CAGCCGTTGGGGGAGGCTGTGACGAAGAAGCCCTTTTCGACGCGATCGCG CGAGGGGCGGACTTGATCAAGGCCTCGGAAGGGCATCAGTTTCCTATGAA CCCGCGATCTTGCACTTTCTGGTGTGCCATCGCTCTGGGGGCGCTTGCGA AGGGCAGTTCTTTCCAATCGGTATGAAGTGCCGTTGGCTGTCCCTATGTT GCTGAACACGTTTCGTGTACCTGACTGTCAGCGGAACCCATTTTCCAAAT CCTACATGAAGCTCTAGTCCGAACTGGTGGGATTTGGTTCGGTTCTTTTT TGGAGTGCCATCGTGGCGTGCTAATGCAACGCACCTCCATGGCTCACTCG GGCTTGGTAACAGGTGGCGAAGTACTCCCAACTAGCGCACGAAGCGCTGG ACCAGTGCAACTCGGGTCCGGCAGACGCTGAGGTCGCGAAGTGAGTCTAA CAGGAATACCCTCGACGAAGGTGACTGCTGGCCTTGCATTTAGTTAGCTT CCTTTTGAAGCACGCCTGCCTGATGGCTTCCGTCCTCGGGTCGCTGCTGC AGATTCGAACGCGCGGCTGAATGCTTACATTCCAGTGGAGCTCGCGGTGC TCCATTCTACGATGAATGTTTACCCCGATGTTTCCTCGGCCATTTTTTTC TACTCCCAGGGCATGGGCAATGCTGGCCTACCTACACGGCTTCATGGGAG ACTTGGTGAGGCGGTTGCCCTGGCCCCGCCGTGGATATTAAGTCACATCG CTGTTGACTCGTCATTAAACCAGTTTTAGCATCTCTGTATCACAGCAGCT GGCGCGTTTACAGATATTTCTCGAGAGTGGGTTCGGCAGCCTGCTCAAGC GTCCCTGAGAATGAAAGTGATCAGTTACAGTTAGAACGCTTCTTTCTTTT TCTGACGTGCTTCCGCTCGACCATTTTGTCCATCCTACAGGAACGGCATC AAGAGTACAAGGCGGTGTCGGAGTCATTGTTTCGGACTTCAATCGAGCGA GGGTCTGCCGAGATGCTTCCTGTGGTGAGAAGGATGTTAGAACCGGGCTA TGGTGCCCATAGGAACCGCAGAACGAAGTCGTTCCTCCTGTGAATGCTTC GGCATCTATGCCTGTGTCGGATGAATGCTGACGACGTCAAGCTCTTCTTC ACAGGTCAAAGCTGAAGAGCCACTCCACTGAGTAAAGGCGGTAGTGGAAC GGACGATATTGTATGTTTCCGAATTCCGCTCCTCTCCAAATTCCATTTTT TGGCAAATAGCGATATCACTGACACATACTTCCATGTCCCCATGCCCTGG CCAGGGGTTTGCTGAGGTTGTTAGCTTGACAGCGTTCGTCGACCCTTGCT GCGGACAGCTGCAGAAGAAGTCGTCTAGCGATGAAGAGCAAGGGATACCG CAGGTGTGTGAGTCGGTT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18169:321..2688-

>mRNA_Ecto-sp13_S_contig18169.5615.1 ID=mRNA_Ecto-sp13_S_contig18169.5615.1|Name=mRNA_Ecto-sp13_S_contig18169.5615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=810bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18169:321..2688- (Ectocarpus species13 EcNAP12_S_4_19m)
CGCTGCGTGCGGACAGGCAGCCATTGCAGGTACAGCAAACGGCGGTGGCA
TCTCCCTCAACCGCACGGTCAAGAACAACATCAGCTTAGAGCAGTCCTGC
TTCAATCCTCATCATCTGGGGCACTGGTGTCAGCCGCTAGGTTGCCGCTG
AAGAGGCTTAGGCTGAGTGCGTCTCCGGCGGTTGGGCTCGTGGGAATGCA
GGAGAGCGCCTTCCTGAGCGACTTCTTCGGCTGCGTTGGGTTTCTCCCAC
TTACCACGCGGAGTACCATTCGCGAGGCTATGGTGGAAATCATGGCAACC
CCGAACACTCTACAGCGGCCAGCCGTTGGGGGAGGCTGTGACGAAGAAGC
CCTTTTCGACGCGATCGCGCGAGGGGCGGACTTGATCAAGGCCTCGGAAG
GGCATCAGTTTCCTATGAACCCGCGATCTTGCACTTTCTGGTGTGCCATC
GCTCTGGGGGCGCTTGCGAAGGGCAGTTCTTTCCAATCGGTGGCGAAGTA
CTCCCAACTAGCGCACGAAGCGCTGGACCAGTGCAACTCGGGTCCGGCAG
ACGCTGAGGTCGCGAAGGCATGGGCAATGCTGGCCTACCTACACGGCTTC
ATGGGAGACTTGGAACGGCATCAAGAGTACAAGGCGGTGTCGGAGTCATT
GTTTCGGACTTCAATCGAGCGAGGGTCTGCCGAGATGCTTCCTGTGGGGT
TTGCTGAGGTTGTTAGCTTGACAGCGTTCGTCGACCCTTGCTGCGGACAG
CTGCAGAAGAAGTCGTCTAGCGATGAAGAGCAAGGGATACCGCAGGTGTG
TGAGTCGGTT
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