mRNA_Ecto-sp13_S_contig18169.5615.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: D8LU13_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU13_ECTSI) HSP 1 Score: 449 bits (1155), Expect = 2.970e-155 Identity = 235/280 (83.93%), Postives = 247/280 (88.21%), Query Frame = 1
Query: 1 RCVRTGSHCRYSKRRWHLPQPHGQEQHQLRA----------VLLQSSSSGALVSAARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEALFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQLQKKSSSDEEQGIPQVCESV 810
RCVRTGS+C YSKRRWHLPQPHGQ QHQ R VLLQSS ALVS+ARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMV+IMATP TLQRPAVGGGCDEEALFDAIARG DLI ASEGHQ PMNPRSCTFWCAIALGALAKGS F+SVAKYSQLAHEAL + SGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFR+SI+RGS + LPVGFAEVVS TAF DPC GQ Q+KSSS EEQG+PQ+ E+V
Sbjct: 45 RCVRTGSNCTYSKRRWHLPQPHGQ-QHQPRPSRRDRTHRKEVLLQSSPPEALVSSARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVQIMATPATLQRPAVGGGCDEEALFDAIARGEDLINASEGHQHPMNPRSCTFWCAIALGALAKGSPFESVAKYSQLAHEALAKSKSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRSSIDRGSTDNLPVGFAEVVSFTAFDDPCGGQRQRKSSSAEEQGMPQLNEAV 323
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: A0A6H5JYW4_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE) HSP 1 Score: 278 bits (711), Expect = 8.990e-86 Identity = 154/277 (55.60%), Postives = 184/277 (66.43%), Query Frame = 1
Query: 1 RCVRTGSHCRYSKRRWHLPQPHGQEQHQLRAV---------LLQSSSSGALVSAARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEALFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQLQKKSSSDEEQGIPQVCE 804
RCV +G C Y RRWHL +PH Q+QHQ + +LQS+ GALV+ LPLKR RLSASPA GLVGMQE+AFLSDFFGCVGF+PLT+ S IRE MV IMA+P LQ+ A+GG C E + R +ASE +Q PM+ +CTFWCAIALGALAKGS +SVAKY LAHEAL + DAEVA AWAMLAY++GFMGDL R QEY A+SES + + +G LP+GFAEVV + CGQ + KS EE PQV +
Sbjct: 51 RCVGSGGQCAYIMRRWHLLKPH-QQQHQSQRPDRDGAHGREVLQSAQPGALVTCGMLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVRIMASPAPLQQSAIGGACSE---VGTMVRAPCWNEASERNQLPMDASTCTFWCAIALGALAKGSPVESVAKYRHLAHEALTKSYPSSTDAEVATAWAMLAYMYGFMGDLARFQEYLALSESCLKCATAKGFVNTLPLGFAEVVLPVKIPNASCGQWETKSLDAEEYVPPQVAD 323
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: D8LU10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU10_ECTSI) HSP 1 Score: 266 bits (680), Expect = 2.050e-82 Identity = 136/205 (66.34%), Postives = 156/205 (76.10%), Query Frame = 1
Query: 196 MQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEALFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQLQKKSSSDEEQGIPQVCESV 810
M+ES FLSDFFGCVGFLPLTT+S IRE MVE+M P LQ+PA+ G DEE F I R A+ KAS+ +Q PMNP+SCTFWCAIALGA+AKG+ +SV KYSQLA EAL + SGPADAEVAKAWAMLAYL GFMGDL R+QEY AVSES FR+S+E GS LP+GFAEVV T D CCGQ Q SS EEQ +PQ+ E+
Sbjct: 1 MEESVFLSDFFGCVGFLPLTTQSHIRETMVEMMTAPAPLQQPAIAGIWDEETRFSEIERRANCRKASDVNQLPMNPQSCTFWCAIALGAVAKGNPVESVEKYSQLAQEALPKSVSGPADAEVAKAWAMLAYLCGFMGDLARYQEYLAVSESFFRSSVEHGSTGTLPLGFAEVVKFTEVSDSCCGQRQINWSSGEEQAMPQLNEAA 205
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: D8LCV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV4_ECTSI) HSP 1 Score: 253 bits (647), Expect = 2.370e-80 Identity = 128/218 (58.72%), Postives = 156/218 (71.56%), Query Frame = 1
Query: 142 LPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEA-LFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQLQKKSSSDEEQGIP 792
LP KR RLSASPA GLV MQE+ FLSDFFGC+GFLPLTT S IRE MV+IM P + Q+ G G D+ F+A+A G DL K S G Q PM+P +CTFWCA+ALGAL KGS +SV Y+QLA EAL + NSGP DAEVAKAW +LA LHGFMGD ER ++Y A+S+S R+SIE+GS + LPVGFAE+V + CG+ Q S +E+ +P
Sbjct: 2 LPFKRCRLSASPATGLVEMQENTFLSDFFGCIGFLPLTTPSQIRETMVKIMVPPASSQQSVFGDGSDKRGHYFEAVAPGGDLSKISAGSQLPMDPSACTFWCAVALGALVKGSPIESVTSYAQLAQEALAKSNSGPGDAEVAKAWVILANLHGFMGDKERFEKYLALSDSFLRSSIEQGSIDTLPVGFAEIVKFKDIANVSCGKWQMGSFPVQEETLP 219
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: D8LCV1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV1_ECTSI) HSP 1 Score: 253 bits (645), Expect = 2.010e-79 Identity = 130/218 (59.63%), Postives = 156/218 (71.56%), Query Frame = 1
Query: 142 LPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEA-LFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQLQKKSSSDEEQGIP 792
LP KR RLSASPA GLVGMQE+AFLSDFFGCVGFLPLTT S IRE MV IM + Q+ G CDE F+A+A G DL K S +QFPM+P +CTFWCA+ALGALAKGS +SV Y+QLA EAL + NSGP DAEVAKAW +LA LHGFMG ER ++Y A+S+S R+SIE+GS + LPVGFAE+V + CG+ Q +S + + P
Sbjct: 6 LPFKRCRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRETMVTIMLPRASSQQSVFGDDCDEGGHYFEAVAPGGDLSKTSARNQFPMDPSACTFWCAVALGALAKGSPIESVTSYAQLAQEALAKSNSGPGDAEVAKAWVILANLHGFMGHKERFEKYLALSDSFLRSSIEQGSIDTLPVGFAEIVKFKDIANVSCGKWQVESFPVQGENFP 223
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: D7FZI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI7_ECTSI) HSP 1 Score: 249 bits (635), Expect = 7.020e-79 Identity = 129/205 (62.93%), Postives = 149/205 (72.68%), Query Frame = 1
Query: 196 MQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEALFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQLQKKSSSDEEQGIPQVCESV 810
MQESAFLSDFFGCVGF PL T+S IR +MV+IM T LQ AVGG E+ FDAI RGAD KASEGHQ PMNP SCTFWCAIALGAL KG SV KYSQLAHEAL + NS PAD EVAKAWA+LAYLHG+MGDL ++Q+Y A+SES R+ + GS + LPVGF+EVV+ D CC + KS EE+ I Q+ E+
Sbjct: 1 MQESAFLSDFFGCVGFFPLATQSEIRASMVKIMTT---LQSSAVGGDFGEQGRFDAIVRGADWSKASEGHQIPMNPSSCTFWCAIALGALVKGHPIGSVTKYSQLAHEALAKSNSAPADVEVAKAWAILAYLHGWMGDLAQYQQYLALSESYVRSFSKHGSTDALPVGFSEVVTYAEISDSCCEERLMKSFVTEEESIFQLNEAA 202
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: D8LU09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU09_ECTSI) HSP 1 Score: 237 bits (604), Expect = 4.480e-71 Identity = 126/221 (57.01%), Postives = 155/221 (70.14%), Query Frame = 1
Query: 142 LPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEALFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQLQKKSSSDEEQGIPQVCE 804
LPLKR RL+ASPA GLVGMQE+AFLSDFFGCVGF+PLT+ S IRE MV+IMA+P LQ+ A+GG ++ R KASE Q PM+P +CTFWCAIALGALAKG +SVAKY LAHEAL + ADAEVA AWAMLAY++GFMGDL + QEY A+SES +++ + + LP+GFAEVV + CGQ + KS EE+ PQ+ +
Sbjct: 2 LPLKRFRLTASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVKIMASPAPLQQSAIGGAFGG---VGSMVRARCWNKASEKPQLPMDPSTCTFWCAIALGALAKGCPVESVAKYRHLAHEALTKSYPSSADAEVATAWAMLAYVYGFMGDLAKFQEYLALSESFLKSATAKRCTDTLPLGFAEVVLPVKIPNASCGQWETKSLDAEERVPPQLAD 219
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: D8LU07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU07_ECTSI) HSP 1 Score: 228 bits (582), Expect = 6.330e-71 Identity = 119/200 (59.50%), Postives = 147/200 (73.50%), Query Frame = 1
Query: 196 MQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEALFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLT-AFVDPCCGQLQKKSSSDEEQGIP 792
M+E+AFLSDFFGCVGFLPLTT+S IRE MV+IM +P +LQ+ AV CD+E +DAIARGA I+ASE +Q P +P +CTFWCAIALGALA+GS QSV KYS+LA EAL SGPA+ EVAKAW +LAYL FM D+ Q+Y A+S++ IE+GSA+MLPVGFA++V L A + C Q Q KS +EQ P
Sbjct: 1 MEENAFLSDFFGCVGFLPLTTKSHIRETMVKIMRSPASLQQSAVEADCDDERSYDAIARGAHWIQASERNQLPRDPSTCTFWCAIALGALAEGSPIQSVYKYSELAQEALATSGSGPANVEVAKAWVILAYLCCFMEDMVGFQDYLALSDAFVTRCIEQGSADMLPVGFADIVKLKYAALSSCGQQWQMKSYRSKEQATP 200
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: D8LCW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW5_ECTSI) HSP 1 Score: 225 bits (574), Expect = 1.160e-66 Identity = 112/200 (56.00%), Postives = 140/200 (70.00%), Query Frame = 1
Query: 196 MQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEA-LFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQLQKKSSSDEEQGIP 792
MQE+AFLSDFFGC GFLPL T S IRE MV+IM P + Q+P +G CDE F+A+ARG DL K S G++ PM+P +CTFWCA+ALGALAKGS +SV Y++LA AL NS PAD EVAKAW +LA LHGFMGD+E ++Y A+S+S +SIE GS + LPVGFAE+V F + CG+ + S +E P
Sbjct: 1 MQENAFLSDFFGCNGFLPLATPSHIRETMVKIMLPPASSQQPVLGDDCDEGGHYFEAVARGGDLSKTSAGNRLPMDPSACTFWCAVALGALAKGSPIESVTSYARLAQAALANSNSDPADTEVAKAWVILANLHGFMGDMEGFEKYLALSDSFVTSSIEEGSTDALPVGFAEIVKFKEFANASCGEWPLECFSVQENNPP 200
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE) HSP 1 Score: 223 bits (569), Expect = 8.510e-65 Identity = 130/260 (50.00%), Postives = 158/260 (60.77%), Query Frame = 1
Query: 1 RCVRTGSHCRYSKRRWHLPQPHGQEQHQLR---------AVLLQSSSSGALVSAARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPNTLQRPAVGGGCDEEALFDAIARGADLIKASEGHQFPMNPRSCTFWCAIALGALAKGSSFQSVAKYSQLAHEALDQCNSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRTSIERGSAEMLPVGFAEVVSLTAFVDPCCGQL 753
RC+R+G C YSKR+ H PQ Q QHQ R LL+ SSSGAL ++ LPLKR RLSASPA GLVGMQE+AFLSDFFGCVGFLPLTT S IR MV +M + E+ FDAI + + G Q P +CTFWCA+ +GAL GS + V YS LA +AL+ +GP +AEVAKAWA+L Y +GFMGD QEY +S+S SIERGS ++LP GFAE++ V G L
Sbjct: 40 RCLRSGVQCTYSKRKPHQPQT--QHQHQRRPRGPACMPSTELLRHSSSGALQASGMLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHQLGASYDSPEQCQFDAILTEDGI---TTGSQLSTGPSACTFWCAVGVGALVNGSPVELVGNYSGLARDALN-AYTGPVNAEVAKAWAILGYFYGFMGDTTTFQEYLGLSDSFLTDSIERGSTDILPAGFAEIIRHKQTVKVYAGNL 293 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18169.5615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18169.5615.1 >prot_Ecto-sp13_S_contig18169.5615.1 ID=prot_Ecto-sp13_S_contig18169.5615.1|Name=mRNA_Ecto-sp13_S_contig18169.5615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=270bp RCVRTGSHCRYSKRRWHLPQPHGQEQHQLRAVLLQSSSSGALVSAARLPLback to top mRNA from alignment at Ecto-sp13_S_contig18169:321..2688- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18169.5615.1 ID=mRNA_Ecto-sp13_S_contig18169.5615.1|Name=mRNA_Ecto-sp13_S_contig18169.5615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2368bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18169:321..2688- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18169:321..2688- >mRNA_Ecto-sp13_S_contig18169.5615.1 ID=mRNA_Ecto-sp13_S_contig18169.5615.1|Name=mRNA_Ecto-sp13_S_contig18169.5615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=810bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18169:321..2688- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |