prot_Ecto-sp13_S_contig18167.5613.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18167.5613.1
Unique Nameprot_Ecto-sp13_S_contig18167.5613.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length262
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18167.5613.1 vs. uniprot
Match: D7G3S3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S3_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 7.930e-96
Identity = 179/226 (79.20%), Postives = 183/226 (80.97%), Query Frame = 0 
Query:    1 MACFIVDWFLEPICKTHKFASRADRFKSLVRAVREGGDTVPKLMLKALEDNPEKVKDGEFGFFNSERLKILTSTTSTAGPKTKADGAAARNDNDGGQXXXXXXXXXGGAPGRTGRRVQLSVGAGESKVQVPVSFTEEEMRRCGLMDEGGIVKKEPVICYFAKPDTEDKKRDEEXXXXXXXXXXXXXXXKRSTLPDT-------------NSGAGDQGDTPTEQPNK 213
            MACFIVDWFLEPICKTHKFASRADRFKSLVRAVR GGDTVPKLMLKALEDNP KVKDGEFGFFNSERLKILTST STAGPKTKADGAA +ND     XXXXXXXXXGGAPG TGRRVQLSVGAGESKVQV VSFTEEEM RCGLMDEGGIVKKEPVICYFA+ DTEDKKR+EE                RSTLPDT             +SGAGDQGDTPT QPNK
Sbjct:  616 MACFIVDWFLEPICKTHKFASRADRFKSLVRAVRAGGDTVPKLMLKALEDNPGKVKDGEFGFFNSERLKILTSTASTAGPKTKADGAAPQNDXXXXXXXXXXXXXXGGAPGWTGRRVQLSVGAGESKVQVLVSFTEEEMSRCGLMDEGGIVKKEPVICYFAQTDTEDKKRNEEKDTAKNTKKSGSNKRYRSTLPDTKCYATRVNNLSLSSSGAGDQGDTPTAQPNK 841
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18167.5613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3S3_ECTSI7.930e-9679.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18167contigEcto-sp13_S_contig18167:300..2905 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18167.5613.1mRNA_Ecto-sp13_S_contig18167.5613.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18167 300..2908 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18167.5613.1 ID=prot_Ecto-sp13_S_contig18167.5613.1|Name=mRNA_Ecto-sp13_S_contig18167.5613.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=262bp
MACFIVDWFLEPICKTHKFASRADRFKSLVRAVREGGDTVPKLMLKALED
NPEKVKDGEFGFFNSERLKILTSTTSTAGPKTKADGAAARNDNDGGQGGS
SRDDPPGGAPGRTGRRVQLSVGAGESKVQVPVSFTEEEMRRCGLMDEGGI
VKKEPVICYFAKPDTEDKKRDEEKDTAKNKKKSGSNKRKRSTLPDTNSGA
GDQGDTPTEQPNKKKKKSLRKAPDGTDSSGDEVLASDNHGGSGGIILENT
SSSSDDDSQDDD
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