mRNA_Ecto-sp13_S_contig18161.5609.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18161.5609.1 vs. uniprot
Match: A0A6H5K8M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M2_9PHAE) HSP 1 Score: 603 bits (1556), Expect = 5.720e-209 Identity = 358/420 (85.24%), Postives = 374/420 (89.05%), Query Frame = 1
Query: 1 SAGRWNIRRLKTQADVKKLIGLDPFHSFLNQSTLKIILRIIGLYLTLVLLFAIVYTTISHTLGCNLKLTSIREGFLFSLETMTTVGYGTHDYLFGSCWIMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFMFQVGELRKHQLLETRVRCYALRHERLTYNPCGNNTNNLGSSEASGFGARSTSVSSNIGLSGLGVSSXXXXXXXXXXSAAELAARMPDQVFFQSHSMRLQHPDDELGGNLLLVLPQASTATVVHRIDAWSPMMPPPRWNSSHGPVQWGLHTDKDIVKAPWEEPPSSPEHKGERSRSDDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDV-GDEGDPASGMLTRQASTDSFSTDYQVGDDVVLPRGCEDGGGAFAAWLYWETS 1257
S GRWNIRRLKTQADV+KLIGLDPFHSFLNQSTLKIILRIIGLYL+LV LFAIVYTTISHTLGCNL+LTSIREGFLFSLETMTTVGYGTHDYLFGSCW+MLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFMFQ+GELRKHQLLETRVRCYALRHERLTYNPCGNN NN+GSSE+SG GARS SVSSNI XXXXX SAAELAARMPDQVFFQSHSMRLQHPDDELGGNLLLVLPQA TVVHRIDAWSPMMPPPRWNSSHGPVQWGLHTDKDIVKAPWEEPPSSPEHKGERSRSD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GDEGDPASGML +QAS++S+STDYQ + L + GG + +YWE +
Sbjct: 90 SVGRWNIRRLKTQADVQKLIGLDPFHSFLNQSTLKIILRIIGLYLSLVFLFAIVYTTISHTLGCNLQLTSIREGFLFSLETMTTVGYGTHDYLFGSCWVMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFMFQIGELRKHQLLETRVRCYALRHERLTYNPCGNN-NNVGSSESSGLGARSASVSSNIXXXXXXXXXXXXXXSTTVTSAAELAARMPDQVFFQSHSMRLQHPDDELGGNLLLVLPQAR-GTVVHRIDAWSPMMPPPRWNSSHGPVQWGLHTDKDIVKAPWEEPPSSPEHKGERSRSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDEGDPASGMLRKQASSNSYSTDYQNLEQEELGSRLGNQGGRRQSAVYWEDA 507
BLAST of mRNA_Ecto-sp13_S_contig18161.5609.1 vs. uniprot
Match: D8LEB7_ECTSI (IRK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB7_ECTSI) HSP 1 Score: 284 bits (727), Expect = 2.550e-90 Identity = 147/154 (95.45%), Postives = 150/154 (97.40%), Query Frame = 1
Query: 1 SAGRWNIRRLKTQADVKKLIGLDPFHSFLNQSTLKIILRIIGLYLTLVLLFAIVYTTISHTLGCNLKLTSIREGFLFSLETMTTVGYGTHDYLFGSCWIMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFM 462
S GRWNIRRLKTQADV+KLIGLDPFHSFLNQSTLKIIL II LYL+LVLLFAIVYTTIS TLGCNL+LTSIREGFLFSLETMTTVGYGTHDYLFGSCWIMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFM
Sbjct: 127 SIGRWNIRRLKTQADVQKLIGLDPFHSFLNQSTLKIILLIIALYLSLVLLFAIVYTTISLTLGCNLQLTSIREGFLFSLETMTTVGYGTHDYLFGSCWIMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFM 280
BLAST of mRNA_Ecto-sp13_S_contig18161.5609.1 vs. uniprot
Match: A0A836CL18_9STRA (Inward rectifier potassium channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL18_9STRA) HSP 1 Score: 238 bits (606), Expect = 9.210e-73 Identity = 133/284 (46.83%), Postives = 168/284 (59.15%), Query Frame = 1
Query: 1 SAGRWNIRRLKTQADVKKLIGLDPFHSFLNQSTLKIILRIIGLYLTLVLLFAIVYTTISHTLGCNLKLTSIREGFLFSLETMTTVGYGTHDYLFGSCWIMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFMFQVGELRKHQLLETRVRCYALRHERLTYNPCGNNTNNLGSSEASGFGARSTSVSSNIGLSGLGVSSXXXXXXXXXXSAAELAARMPDQVFFQSHSMRLQHPDDELGGNLLLVLPQA-STATVVHRIDAWS 849
S GRWNI R ++ L D FH+ L+ +T K++ + YL +V FA++Y ISH GCN+ + RE + FSLETMTTVGYGT D FG CW ++ +++ QAC GLLIDA LIG+LFARL+RPQTRA+TVVF+ AV+RR+RGE YFMFQVGELRKHQLLET+VRCYA+RH R + + G A P+ V +Q+H+MRLQHPDDELGG LLLVLPQ + V + WS
Sbjct: 14 SYGRWNIDRNTKDDHIRTLFNNDRFHTVLHMTTWKVLSYLFFAYLVVVSTFALIYLIISHFDGCNMGIVDYREAYYFSLETMTTVGYGTQDVFFGRCWSVMVIITAQACCGLLIDALLIGVLFARLARPQTRASTVVFSNKAVLRRIRGEYYFMFQVGELRKHQLLETKVRCYAVRHHRT------------------------------LPIDAAGCLDD---------------ANPPETVHYQTHNMRLQHPDDELGGALLLVLPQVRARVAVFQKYAIWS 252
BLAST of mRNA_Ecto-sp13_S_contig18161.5609.1 vs. uniprot
Match: A0A835YU47_9STRA (Inward rectifier potassium channel-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU47_9STRA) HSP 1 Score: 223 bits (568), Expect = 4.680e-67 Identity = 124/266 (46.62%), Postives = 161/266 (60.53%), Query Frame = 1
Query: 1 SAGRWNIRRLKTQADVKKLIGLDPFHSFLNQSTLKIILRIIGLYLTLVLLFAIVYTTISHTLGCNLKLTSIREGFLFSLETMTTVGYGTHDYLFGSCWIMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFMFQVGELRKHQLLETRVRCYALRHERLTYNPCGNNTNNLGSSEASGFGARSTSVSSNIGLSGLGVSSXXXXXXXXXXSAAELAARMPDQVFFQSHSMRLQHPDDELGGNLLLV 798
S GRWNI R ++KL D FH+ L+ +T K++ + YL +V +FA +Y I+ GCNL + RE + FSLETMTTVG+GT D FG CW ++ +++ QAC GLLIDA LIG+LFARL RPQTRA+TVVF+ AV+RR+RGE YFMFQV ELRKHQLLET VRCYA+RH R+ + +N L ++ P+ V +Q+H+MRLQHPDDELGG++LLV
Sbjct: 39 SFGRWNIGRNTKDEGMRKLFSNDWFHTVLHMTTWKVLGALFLTYLAVVTVFAALYLAIARFDGCNLGIVDYREAYYFSLETMTTVGFGTQDVFFGRCWSVMVIITAQACSGLLIDALLIGLLFARLGRPQTRASTVVFSDKAVLRRIRGEYYFMFQVAELRKHQLLETHVRCYAVRHH------------------------RTLPIDANGALD---------------------ESQPPETVHYQTHNMRLQHPDDELGGSMLLV 259
BLAST of mRNA_Ecto-sp13_S_contig18161.5609.1 vs. uniprot
Match: A0A8K1C704_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C704_PYTOL) HSP 1 Score: 187 bits (475), Expect = 4.620e-51 Identity = 116/303 (38.28%), Postives = 164/303 (54.13%), Query Frame = 1
Query: 1 SAGRWNIRRLKTQADVKKLIGLDPFHSFLNQSTLKIILRIIGLYLTLVLLFAIVYTTISHTLGCNLKLTSIREGFLFSLETMTTVGYGTH--DYLFGSCWIMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFMFQVGELRKHQLLETRVRCYALRHERLTYNPCGNNTNNLGSSEASGFGARSTSVSSNIGLSGLGVSSXXXXXXXXXXSAAELAARMPDQVFFQSHSMRLQHPDDELGGNLLLVLPQASTATVVHRIDAWSPMMPPPRWNSS---HGPV 894
S GRWNIRR K + KL DPFH+F+N K++ +IG+YL ++++F +YTT+ + C + + +GF FS+ M T+G+GT+ D FG C M ++++Q+ I +++DA IG+LF R +R Q RANT+V + AV+RR+RGE YFMFQ E+RKHQL+E VR YA+RH+ Y FG +FQS+ MR+QHP+DEL G +LL LP + VVHR+DAWSP+M P +S H PV
Sbjct: 70 SRGRWNIRREKVD-NYWKLYLQDPFHTFINMRLSKVMSGLIGVYLIVLIIFGALYTTVPREM-CKTAIFTYFDGFSFSVSVMFTIGFGTNGGDVFFGDCVWMQVIITVQSLIAIILDALSIGVLFGRFARAQARANTIVLSSTAVVRRIRGELYFMFQACEMRKHQLVEAHVRMYAIRHD---YE----------------FG---------------------------------------QHYYFQSYPMRIQHPNDELNGMMLLALP----SVVVHRLDAWSPLMRPKSASSCGYHHDPV 308
BLAST of mRNA_Ecto-sp13_S_contig18161.5609.1 vs. uniprot
Match: A0A5D6YC93_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YC93_9STRA) HSP 1 Score: 186 bits (473), Expect = 7.910e-51 Identity = 111/290 (38.28%), Postives = 154/290 (53.10%), Query Frame = 1
Query: 1 SAGRWNIRRLKTQADVKKLIGLDPFHSFLNQSTLKIILRIIGLYLTLVLLFAIVYTTISHTLGCNLKLTSIREGFLFSLETMTTVGYGTH--DYLFGSCWIMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFMFQVGELRKHQLLETRVRCYALRHERLTYNPCGNNTNNLGSSEASGFGARSTSVSSNIGLSGLGVSSXXXXXXXXXXSAAELAARMPDQVFFQSHSMRLQHPDDELGGNLLLVLPQASTATVVHRIDAWSPMMPP 864
S GRWNIRR K ++ KL DPFHS +N K++ ++ LYL+ +L F +YTT+ C + S+ +GF FS+ + T+G+GT+ D F C M +++ ++ +G+L++A IGI+F R SR Q RANT+V + NAV+RR+RGE YFMFQ E+RKHQL+E VR YA+RH+ +FQSH MR+QHPDD+LGG LLL LP + VVHR+DAWSP+ P
Sbjct: 66 SKGRWNIRRHKVES-YWKLYLQDPFHSVVNMRLSKVLGTLVFLYLSTLLFFGFLYTTVPD--HCKTAIFSLYDGFSFSVSVLFTIGFGTNGGDVFFNRCGWMQTVITSESLVGMLLEAISIGIIFQRFSRAQARANTIVLSTNAVVRRIRGELYFMFQACEMRKHQLVEAHVRMYAIRHD----------------------------------------------------------VEFGTHYYFQSHPMRIQHPDDDLGGMLLLALP----SVVVHRMDAWSPLCRP 290
BLAST of mRNA_Ecto-sp13_S_contig18161.5609.1 vs. uniprot
Match: F2TZV9_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TZV9_SALR5) HSP 1 Score: 181 bits (458), Expect = 2.200e-48 Identity = 116/297 (39.06%), Postives = 165/297 (55.56%), Query Frame = 1
Query: 1 SAGRWNIRRLKTQADVKKLIGLDPFHSFLNQSTLKIILRIIGLYLTLVLLFAIVYTTISHTLGCNLKLTSIREGFLFSLETMTTVGYGTHDYLFGSCWIMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFMFQVGELRKHQLLETRVRCYALRHERLTYNPCGNNTNNLGSSEASGFGARSTSVSSNIGLSGLGVSSXXXXXXXXXXSAAELAARMPDQVFFQSHSMRLQHPDDELGGNLLLVLPQASTATVVHRIDAWSPMMPPPRWNSSHGP 891
S G +N+RR+ +A V L D FH+ L S+LKI L ++ +Y++ VLL+A +Y IS C+L+L + + F+ S+ET+TT+GYG F C ++ Q+ GL IDA IG++FAR+SR R+ T+VF+ NA+IR++ YF+FQV +L+K+ L+E VR YA+RH ++ G R+ SS S++ P V+FQSH+MRL HP+DELGG LLL LP V+HRIDAWSP+MP P S H P
Sbjct: 96 SRGSFNMRRIIPRAAVASLHMRDWFHTLLTMSSLKIGLVLLVIYVSAVLLWAGLYHLISEP--CDLQLHTFEDAFMLSIETLTTIGYGVPSPYFNGCLAGPFVVLSQSAAGLFIDALCIGLIFARISRGNRRSFTIVFSNNAIIRQIGNNWYFLFQVCDLKKYALVEAHVRMYAIRHRTVS------------------SGGRAVPRSSG---------------PARTISSSSSPPLDPTHVWFQSHAMRLTHPNDELGGMLLLSLPDQ----VLHRIDAWSPLMPTPHDGSEHDP 353
BLAST of mRNA_Ecto-sp13_S_contig18161.5609.1 vs. uniprot
Match: K3WWT5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWT5_GLOUD) HSP 1 Score: 179 bits (454), Expect = 5.630e-48 Identity = 104/290 (35.86%), Postives = 151/290 (52.07%), Query Frame = 1
Query: 1 SAGRWNIRRLKTQADVKKLIGLDPFHSFLNQSTLKIILRIIGLYLTLVLLFAIVYTTISHTLGCNLKLTSIREGFLFSLETMTTVGYGTH--DYLFGSCWIMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFMFQVGELRKHQLLETRVRCYALRHERLTYNPCGNNTNNLGSSEASGFGARSTSVSSNIGLSGLGVSSXXXXXXXXXXSAAELAARMPDQVFFQSHSMRLQHPDDELGGNLLLVLPQASTATVVHRIDAWSPMMPP 864
S GRWNIRR K KL DPFH+ +N K++ ++ +Y+ ++ F ++Y T+ + CN + S +GF FS+ + T+G+GT+ D F C + ++++++ + +L+DA IGI+F R SR Q RANT+V + NA +RR+RGE YFMFQ E+RKHQL+E VR YA+RH+ +FQSH MR+QHPDD+LGG +LL LP + VVHR+DAWSP+ P
Sbjct: 75 SKGRWNIRRQK-MPQYWKLYLQDPFHTLVNLRLSKVLASLVVMYIAALMFFGLLYRTVPSS--CNTAIHSYFDGFSFSVSVLFTIGFGTNGGDVFFNECVWVQTIITMESLVAVLLDAIAIGIIFQRFSRAQARANTIVLSTNACVRRIRGELYFMFQACEMRKHQLVEAHVRMYAIRHD----------------------------------------------------------VEFGQHYYFQSHPMRIQHPDDDLGGMMLLALP----SVVVHRMDAWSPLCRP 299
BLAST of mRNA_Ecto-sp13_S_contig18161.5609.1 vs. uniprot
Match: A0A421GNN7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GNN7_9STRA) HSP 1 Score: 177 bits (450), Expect = 6.390e-48 Identity = 111/292 (38.01%), Postives = 155/292 (53.08%), Query Frame = 1
Query: 1 SAGRWNIRRLKTQADVKKLIGLDPFHSFLNQSTLKIILRIIGLYLTLVLLFAIVYTTIS--HTLGCNLKLTSIREGFLFSLETMTTVGYG--THDYLFGSCWIMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFMFQVGELRKHQLLETRVRCYALRHERLTYNPCGNNTNNLGSSEASGFGARSTSVSSNIGLSGLGVSSXXXXXXXXXXSAAELAARMPDQVFFQSHSMRLQHPDDELGGNLLLVLPQASTATVVHRIDAWSPMMPP 864
S G++NI R D +K+ DPFH+ +N T +II + Y ++L FA+ Y +S H C++ L+SI E ++FSLET+ T+GYG T+D +G C + +L+L++ G+++D+ IGI +AR SR RANT++F+ +AVIR++RG YFMFQ E RKHQL+E VR YA+RHE E A P+ FQ H MR+Q PDD+ G LL+VLPQ VVHRID WSP+ PP
Sbjct: 38 SLGQFNIYR--KGGDWRKIYWDDPFHTVINTRTSRIIWGVFIAYFFIILFFALAYLDVSVRHP-TCHVGLSSIIEAYIFSLETIMTIGYGAPTNDIFYGGCTTIATLLTLESFAGIILDSVCIGIFYARFSRANQRANTIMFSNSAVIRKIRGHYYFMFQTCERRKHQLVEAHVRLYAVRHEE------------------------------------------------------EDDAYEPNDFLFQCHQMRVQQPDDDCGAMLLMVLPQV----VVHRIDQWSPLFPP 268
BLAST of mRNA_Ecto-sp13_S_contig18161.5609.1 vs. uniprot
Match: A0A484DZB3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZB3_BRELC) HSP 1 Score: 177 bits (450), Expect = 1.010e-47 Identity = 112/310 (36.13%), Postives = 162/310 (52.26%), Query Frame = 1
Query: 1 SAGRWNIRRLKTQADVKKLIGLDPFHSFLNQSTLKI------------------ILRIIGLYLTLVLLFAIVYTTIS--HTLGCNLKLTSIREGFLFSLETMTTVGYG--THDYLFGSCWIMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFMFQVGELRKHQLLETRVRCYALRHERLTYNPCGNNTNNLGSSEASGFGARSTSVSSNIGLSGLGVSSXXXXXXXXXXSAAELAARMPDQVFFQSHSMRLQHPDDELGGNLLLVLPQASTATVVHRIDAWSPMMPP 864
S GR+N+ R + +K+ DPFH+ +N T +I I+ ++ +Y ++LLFA+ Y +S H C++ L+SI + ++FSLET+ T+GYG T+D +G C M +L+L++ G+++D+ IGI +AR +R RANT++F+ +AVIR++RG+ YFMFQ E RKHQL+E VR YA+RHE AE A P +V FQ H MR+Q PDD+ G LL+VLPQ VVHRID WSP+ PP
Sbjct: 40 SLGRFNVYR--KGGEWRKIYWDDPFHTLINTRTSRIVWGVSIAVSWTLLTMTLSIILLVSIYFFVILLFALAYLNVSMRHP-TCHVGLSSIIDAYIFSLETIMTIGYGAPTNDIFYGGCTSMATLLTLESFAGIILDSVCIGIFYARFARANQRANTIIFSNSAVIRKIRGQYYFMFQTCERRKHQLVEAHVRLYAVRHE------------------------------------------------------AEDDAAGPSEVMFQCHQMRVQQPDDDCGAMLLMVLPQV----VVHRIDQWSPLFPP 288 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18161.5609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18161.5609.1 >prot_Ecto-sp13_S_contig18161.5609.1 ID=prot_Ecto-sp13_S_contig18161.5609.1|Name=mRNA_Ecto-sp13_S_contig18161.5609.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=420bp SAGRWNIRRLKTQADVKKLIGLDPFHSFLNQSTLKIILRIIGLYLTLVLLback to top mRNA from alignment at Ecto-sp13_S_contig18161:562..3365+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18161.5609.1 ID=mRNA_Ecto-sp13_S_contig18161.5609.1|Name=mRNA_Ecto-sp13_S_contig18161.5609.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2804bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18161:562..3365+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18161:562..3365+ >mRNA_Ecto-sp13_S_contig18161.5609.1 ID=mRNA_Ecto-sp13_S_contig18161.5609.1|Name=mRNA_Ecto-sp13_S_contig18161.5609.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1260bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18161:562..3365+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |