prot_Ecto-sp13_S_contig1815.5603.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1815.5603.1
Unique Nameprot_Ecto-sp13_S_contig1815.5603.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length283
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1815.5603.1 vs. uniprot
Match: A0A6H5L912_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L912_9PHAE)

HSP 1 Score: 456 bits (1172), Expect = 3.880e-160
Identity = 246/282 (87.23%), Postives = 250/282 (88.65%), Query Frame = 0 
Query:    1 MKPTALHPPGFAPTVFPGLTNTDGGGGGASPLAMSLGFQLRNHPHLRRFHGDGSGGGEATNSFLDIVRKAIVAKARKVRDAIGTKKYDELALFNRKGRPTVHVPAGRGVTESEWAELDARRTVRFSPRIGAVLVPTRKETFPKPADVAASFVTAEERAGAENDISPTGSGRSEWQALLLETRDEAREKQMAQPQLXXXXXXXXXXXXXXXXXXXDAQKERPPNVFEALVLQWRNTVNSNNEADGARHGGFGLRRPLGDGGKIVHHASDPSLVSSDAEGRTAG 282
            MKPTALHPP FAPT FPGLTNTDG GGGA+PLAMSLGFQLRNHPHLR+FHGDGSGGGEATNSFL+ VRKAIV KARKVRDAIGTKKYDEL L  RKGRPTVHVP GRGVTE EWAELD RRTVRFSPRIGAVLVPTRKETFPKPADVAASFVTAEERAGAE DISPTG GRSEWQALLLETRDEAREKQ A    XXXXXXXXXXXXXX     DAQK RP NVFEALVLQWRNTVNSNNE DGARHGGFG+RR LGDGGK VHH SDP  V SDAEGRTAG
Sbjct:    1 MKPTALHPPSFAPTAFPGLTNTDGSGGGATPLAMSLGFQLRNHPHLRQFHGDGSGGGEATNSFLNNVRKAIVDKARKVRDAIGTKKYDELTLCKRKGRPTVHVPTGRGVTEREWAELDTRRTVRFSPRIGAVLVPTRKETFPKPADVAASFVTAEERAGAEKDISPTGPGRSEWQALLLETRDEAREKQEAXXXXXXXXXXXXXXXXXXQQPRKDAQKARPLNVFEALVLQWRNTVNSNNEVDGARHGGFGVRRRLGDGGKKVHHVSDPCHVDSDAEGRTAG 282
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BLAST of mRNA_Ecto-sp13_S_contig1815.5603.1 vs. uniprot
Match: D7G2Z5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z5_ECTSI)

HSP 1 Score: 433 bits (1113), Expect = 2.700e-151
Identity = 233/284 (82.04%), Postives = 243/284 (85.56%), Query Frame = 0 
Query:    1 MKPTALHPPGFAPTVFPGLTNTDGG--GGGASPLAMSLGFQLRNHPHLRRFHGDGSGGGEATNSFLDIVRKAIVAKARKVRDAIGTKKYDELALFNRKGRPTVHVPAGRGVTESEWAELDARRTVRFSPRIGAVLVPTRKETFPKPADVAASFVTAEERAGAENDISPTGSGRSEWQALLLETRDEAREKQMAQPQLXXXXXXXXXXXXXXXXXXXDAQKERPPNVFEALVLQWRNTVNSNNEADGARHGGFGLRRPLGDGGKIVHHASDPSLVSSDAEGRTAG 282
            MKPT LHPPG  PTVFPGLT TDGG  GGGASPLAMSLGF+LRNHPHLRRFHGDGSGGGEATNSFLD VR+AIV KAR+VRDAIGTKKYDEL LF RKG+PTVHVP GR V E  WAELDARRTVRFSPRIGAVLVPTRKETFPKPADVAASFVTAEERAGAE +ISPTGSGRSEWQALLLETR EARE+Q  Q QLXXXXXXXXX           AQKERP NVFEAL LQ RNT NSN+E DG RHGGFG+RRPLG+G K VHH SDPSLV S+AEGRTAG
Sbjct:    1 MKPTTLHPPGSTPTVFPGLTTTDGGRGGGGASPLAMSLGFRLRNHPHLRRFHGDGSGGGEATNSFLDNVREAIVDKAREVRDAIGTKKYDELTLFKRKGQPTVHVPTGRVVAERAWAELDARRTVRFSPRIGAVLVPTRKETFPKPADVAASFVTAEERAGAEKEISPTGSGRSEWQALLLETRHEARERQETQAQLXXXXXXXXXQRHECQQPRKLAQKERPRNVFEALFLQRRNTANSNDEVDGPRHGGFGVRRPLGEGRKKVHHVSDPSLVGSNAEGRTAG 284
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1815.5603.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L912_9PHAE3.880e-16087.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2Z5_ECTSI2.700e-15182.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 185..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1815contigEcto-sp13_S_contig1815:1433..2936 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1815.5603.1mRNA_Ecto-sp13_S_contig1815.5603.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1815 1433..2936 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1815.5603.1 ID=prot_Ecto-sp13_S_contig1815.5603.1|Name=mRNA_Ecto-sp13_S_contig1815.5603.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=283bp
MKPTALHPPGFAPTVFPGLTNTDGGGGGASPLAMSLGFQLRNHPHLRRFH
GDGSGGGEATNSFLDIVRKAIVAKARKVRDAIGTKKYDELALFNRKGRPT
VHVPAGRGVTESEWAELDARRTVRFSPRIGAVLVPTRKETFPKPADVAAS
FVTAEERAGAENDISPTGSGRSEWQALLLETRDEAREKQMAQPQLQQERD
QEEEQRRERQQPRKDAQKERPPNVFEALVLQWRNTVNSNNEADGARHGGF
GLRRPLGDGGKIVHHASDPSLVSSDAEGRTAG*
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