prot_Ecto-sp13_S_contig18145.5599.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18145.5599.1
Unique Nameprot_Ecto-sp13_S_contig18145.5599.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length223
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18145.5599.1 vs. uniprot
Match: D7G8C1_ECTSI (Hypothetical leucine rich repeat zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C1_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 1.420e-84
Identity = 194/224 (86.61%), Postives = 197/224 (87.95%), Query Frame = 0 
Query:    2 PVSPESSNGGRRRRGRSPSRSXXXXXSPAARKPPTTPECAPFPLPPVPPSGRLRRLCLELEPAAASGPRAGHDDGGGVRSNPSNRASLAAAARCAFPLRRLAPLLPPGLTSLEVWSANARPVPCSVQRGATSCSRERPIGRRLGRGGGSSSGGAWRMPSAAADGGN--PAGIEGAGXXXXXXXXXXXXXXXXXXXXXXXXXDASEGMASGVAVLAGPGDLLSVS 223
            PVSP SSNGGRRRRGRSPS S     SPAARK PTTPECAPFPLP VPPSGRLRRLCLEL+PAAA G  A  DDGGGVRSNPSNRAS AAAARCAFPLRRLAPLLPPGLTSLEVWSANARPVP SVQR ATS  R+RPIGRRLGR GGSSSGGAWRM SAAADG    PAGIEGA XXXXXXXXXXXXXXXXXXXXXXXX DASEG+ASGVAVLAGPGDLLSVS
Sbjct:  354 PVSPGSSNGGRRRRGRSPSGSPSRSRSPAARKTPTTPECAPFPLPAVPPSGRLRRLCLELQPAAAGGLGAVQDDGGGVRSNPSNRASPAAAARCAFPLRRLAPLLPPGLTSLEVWSANARPVPRSVQRDATSGDRKRPIGRRLGRRGGSSSGGAWRMTSAAADGDGETPAGIEGAXXXXXXXXXXXXXXXXXXXXXXXXXGDASEGVASGVAVLAGPGDLLSVS 577
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18145.5599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8C1_ECTSI1.420e-8486.61Hypothetical leucine rich repeat zinc finger prote... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18145contigEcto-sp13_S_contig18145:555..1223 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18145.5599.1mRNA_Ecto-sp13_S_contig18145.5599.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18145 555..1225 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18145.5599.1 ID=prot_Ecto-sp13_S_contig18145.5599.1|Name=mRNA_Ecto-sp13_S_contig18145.5599.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=223bp
SPVSPESSNGGRRRRGRSPSRSPSRSRSPAARKPPTTPECAPFPLPPVPP
SGRLRRLCLELEPAAASGPRAGHDDGGGVRSNPSNRASLAAAARCAFPLR
RLAPLLPPGLTSLEVWSANARPVPCSVQRGATSCSRERPIGRRLGRGGGS
SSGGAWRMPSAAADGGNPAGIEGAGSSSAKGAGSGRQRSGGGGGDNGDGG
DASEGMASGVAVLAGPGDLLSVS
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