prot_Ecto-sp13_S_contig1814.5598.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1814.5598.1
Unique Name	prot_Ecto-sp13_S_contig1814.5598.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	557

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1814.5598.1 vs. uniprot
Match: A0A6H5JSB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSB3_9PHAE)

HSP 1 Score: 840 bits (2169), Expect = 8.020e-298
Identity = 506/615 (82.28%), Postives = 522/615 (84.88%), Query Frame = 0

Query:    1 MEQASAERALLAVSGLPTAGRGEGRPAAAAMATSAGGSGRAVGSGEKEGVSASDLSLAAYIGFALAALELAGETSVCXXXXXXXXXXXXGSEDNPPAGESLARAQERLVGIVVDSPLDLRFVLLHGCRVSYASGVKRRRXRSEGGGEEGESHLPAASFGGAVGLGEAAVNGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERQLFLPHAEALMRDRSKRIVNKGLELACFVAERLGGFPDGTGAFAFDWEPGDEEIDGAGDDGGRGDAWNGGDREEAG-------------------------YCLLF------------------SRDADAGGSATSEGTSPSSRQRPFDPYRLDLAGFLQVLVDVMVSCPLPGLRTRGHAALVALLGAAAEASRFRVLRRLVELCPWPNARGLLLDAFRREIDRALRQCGIEEXXXXXXXXXXXXXXXXXXXXXXXXPS------------------LSSSSPFASALAGDVVCEQLRRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGARGGSGRAEAGAAWGRLELREPKKLLQNRLLVQGLLDELRGAVITADNAGPEHFRLFILEDAAQQCLEELELA 554
            MEQASAE+ALLAVS +PTAGRGEGRPAAA +ATSAGGSGRAVGSGEKEGVSASDLSLAAYIGFAL+ALELAGETSVC  XXXXXXXXXXGSEDNPPA ESLARAQERLVGIVVDSPLDLRFVLLHG RVS+ASGVKRRR RSEGGGE+GESHLPAA  GGAVGLGEAA+NGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTER+LFLPHAEALMRDRSKR+ NKGLELACFVAERLGGFPD TGAFAFDWEPGDEEIDGAGDD       NGG REEA                          Y  +F                   RDADAG S  SE T+PSSR+R FDP+ LDLAGFLQVLVDVMVSCPLPGLRTRGHAAL+ALLGAA EASRFRVLRRLVELCPWPNARGLLLDAFRREIDRALRQCGIEEXXXXXXXXXXXXXXXXXXXXXXXX                    LSSSSPFASALAGDVVCEQLRRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGARGGSGRAEAGAAWGRLELREPKKLLQN+LLVQGLLDELRGAVITADNAGPEHFRLFILEDAAQQCL+ELELA
Sbjct:  276 MEQASAEQALLAVSRVPTAGRGEGRPAAAVVATSAGGSGRAVGSGEKEGVSASDLSLAAYIGFALSALELAGETSVCCTXXXXXXXXXXGSEDNPPARESLARAQERLVGIVVDSPLDLRFVLLHGYRVSFASGVKRRRKRSEGGGEKGESHLPAAKLGGAVGLGEAAINGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERRLFLPHAEALMRDRSKRVANKGLELACFVAERLGGFPDRTGAFAFDWEPGDEEIDGAGDDXXXXXXXNGGGREEAHTPYGHTRTSAHNYEFYGCPDLLSHRYFTIFRPPPTPFHPFRRDVAAWQQRDADAGSSTISENTNPSSRRRLFDPHHLDLAGFLQVLVDVMVSCPLPGLRTRGHAALMALLGAADEASRFRVLRRLVELCPWPNARGLLLDAFRREIDRALRQCGIEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSSSPFASALAGDVVCEQLRRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGARGGSGRAEAGAAWGRLELREPKKLLQNKLLVQGLLDELRGAVITADNAGPEHFRLFILEDAAQQCLQELELA 890

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BLAST of mRNA_Ecto-sp13_S_contig1814.5598.1 vs. uniprot
Match: D7G1P6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P6_ECTSI)

HSP 1 Score: 677 bits (1748), Expect = 1.670e-236
Identity = 398/555 (71.71%), Postives = 414/555 (74.59%), Query Frame = 0

Query:    1 MEQASAERALLAVSGLPTAGRGEGRPAAAAMATSAGGSGRAVGSGEKEGVSASDLSLAAYIGFALAALELAGETSVCXXXXXXXXXXXXGSEDNPPAGESLARAQERLVGIVVDSPLDLRFVLLHGCRVSYASGVKRRRXRSEGGGEEGESHLPAASFGGAVGLGEAAVNGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERQLFLPHAEALMRDRSKRIVNKGLELACFVAERLGGFPDGTGAFAFDWEPGDEEIDGAGDDGGRGDAWNGGDREEAGYCLLFSRDADAGGSATSEGTSPSSRQRPFDPYRLDLAGFLQVLVDVMVSCPLPGLRTRGHAALVALLGAAAEASRFRVLRRLVELCPWPNARGLLLDAFRREIDRALRQCGIEEXXXXXXXXXXXXXXXXXXXXXXXXPSLSSSSPFASALAGDVVCEQLRRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGARGGSGRAEAGAAWGRLELREPKKLLQNRLLVQGLLDELRGAVITADNAGPEHFRLFILEDAAQQCLEELELAV 555
            MEQASAERALLAVSGLPTAGRGEGRPAAAA+A   GGSG AVGSGEKEGVSASDLSLAAYIGFAL+ALELAGETSVCXXXXXXXXXXX GSEDNP AGESLARA+ERL+GIVVDSPLDLRF LLHGCRVSYASGVKRRR +SEGGGEEG+S LPAA  GGAVGL EAAVNGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTER+LFLPHAE LMRDRS+R+ NKGLELACFVAERLGGFPD +GA+AFDWEPGDEEIDGAGDD      WNGG R+E                                           VLVDVMVSCPLPGLRTRGHAALVA+L  A EASRFR+LRRLVELCPWPN                                                                     L RACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGAR  SGRAEAGAAWGRL LREPKKLLQNRLLVQGLLDELRGAVITA+NAGPEHFRLFILEDAAQQCL+ELELAV
Sbjct:  280 MEQASAERALLAVSGLPTAGRGEGRPAAAAVAXXXGGSGHAVGSGEKEGVSASDLSLAAYIGFALSALELAGETSVCXXXXXXXXXXXTGSEDNPAAGESLARAEERLIGIVVDSPLDLRFALLHGCRVSYASGVKRRRRKSEGGGEEGKSQLPAARLGGAVGLAEAAVNGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERRLFLPHAEVLMRDRSRRVANKGLELACFVAERLGGFPDRSGAYAFDWEPGDEEIDGAGDDXXXXXXWNGGGRQE-------------------------------------------VLVDVMVSCPLPGLRTRGHAALVAILSGADEASRFRLLRRLVELCPWPN---------------------------------------------------------------------LLRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGARADSGRAEAGAAWGRLGLREPKKLLQNRLLVQGLLDELRGAVITANNAGPEHFRLFILEDAAQQCLQELELAV 722

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1814.5598.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1814.5598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JSB3_9PHAE	8.020e-298	82.28	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G1P6_ECTSI	1.670e-236	71.71	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 380..417
IPR013877	YAP-binding/ALF4/Glomulin	PFAM	PF08568	Kinetochor_Ybp2	coord: 320..401 e-value: 7.1E-9 score: 34.7
IPR019516	Glomulin/ALF4	PANTHER	PTHR15430	FKBP-ASSOCIATED PROTEIN	coord: 179..440

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1814	contig	Ecto-sp13_S_contig1814:4915..8170 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1814.5598.1	mRNA_Ecto-sp13_S_contig1814.5598.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1814 4915..9756 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1814.5598.1 ID=prot_Ecto-sp13_S_contig1814.5598.1|Name=mRNA_Ecto-sp13_S_contig1814.5598.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=557bp
MEQASAERALLAVSGLPTAGRGEGRPAAAAMATSAGGSGRAVGSGEKEGV
SASDLSLAAYIGFALAALELAGETSVCCTAAAAAAAAATGSEDNPPAGES
LARAQERLVGIVVDSPLDLRFVLLHGCRVSYASGVKRRRRRSEGGGEEGE
SHLPAASFGGAVGLGEAAVNGALPWTLRGVSTLAYLVACEPRLRDKWLPL
VWSRRTERQLFLPHAEALMRDRSKRIVNKGLELACFVAERLGGFPDGTGA
FAFDWEPGDEEIDGAGDDGGRGDAWNGGDREEAGYCLLFSRDADAGGSAT
SEGTSPSSRQRPFDPYRLDLAGFLQVLVDVMVSCPLPGLRTRGHAALVAL
LGAAAEASRFRVLRRLVELCPWPNARGLLLDAFRREIDRALRQCGIEEEE
RQQQQQLQQKQQQQHQQAASAAPSLSSSSPFASALAGDVVCEQLRRACRR
GPLASLMADMDSRTGGLALARYAHKLDAVGGARGGSGRAEAGAAWGRLEL
REPKKLLQNRLLVQGLLDELRGAVITADNAGPEHFRLFILEDAAQQCLEE
LELAVE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013877	YAP-bd/ALF4/Glomulin
IPR019516	Glomulin/ALF4