mRNA_Ecto-sp13_S_contig18130.5592.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18130.5592.1 vs. uniprot
Match: D7G1H9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H9_ECTSI) HSP 1 Score: 394 bits (1013), Expect = 4.910e-136 Identity = 210/214 (98.13%), Postives = 212/214 (99.07%), Query Frame = 1
Query: 40 GDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVAPPXXXXXXXXXXXXXXXXATGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 681
GDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSV+PPXXXXXXXXXXXXXXXX GSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLAS+GGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV
Sbjct: 90 GDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 303
BLAST of mRNA_Ecto-sp13_S_contig18130.5592.1 vs. uniprot
Match: A0A6H5L0Y5_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y5_9PHAE) HSP 1 Score: 387 bits (994), Expect = 5.560e-130 Identity = 210/219 (95.89%), Postives = 211/219 (96.35%), Query Frame = 1
Query: 37 GGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVAPPXXXXXXXXXXXXXXXXATGS----GPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 681
GGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSV+PPXXXXXXXXXXXXXXXX GPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV
Sbjct: 311 GGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXXXXXXXGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 529
BLAST of mRNA_Ecto-sp13_S_contig18130.5592.1 vs. uniprot
Match: A0A6H5KGF5_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGF5_9PHAE) HSP 1 Score: 216 bits (550), Expect = 8.810e-66 Identity = 114/204 (55.88%), Postives = 132/204 (64.71%), Query Frame = 1
Query: 70 LFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVAPPXXXXXXXXXXXXXXXXATGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 681
LFPG+RLLHA+P V V FFT +ECD YI+ S G P +SAT + TSTTWFH +++ PEL+AKAS L+GV + +WEE QTVRYRPGE+F WHLDALPP+ ASKGGQR AT+LVYLT M GGATAFRDLGPLRVRP+KG L+FFPS GG PFD R LHAGEV
Sbjct: 117 LFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKG------------GLAPTELQSATTSSQCQQXX--TSTTWFHHYASAPELVAKASLLLGVD-DYSKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEV 305
BLAST of mRNA_Ecto-sp13_S_contig18130.5592.1 vs. uniprot
Match: A0A7S2KCF3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF3_9STRA) HSP 1 Score: 216 bits (549), Expect = 1.010e-64 Identity = 116/208 (55.77%), Postives = 137/208 (65.87%), Query Frame = 1
Query: 73 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVAPPXXXXXXXXXXXXXXXXATGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGP-----LRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 681
F R+LH +P VI V DFFT EECD+YI+ S M RS T+G D A +QRTSTTWFH + VPELMAK+S L G+ + G +EE QTVRY+P +KFTWHLDAL P + SKGGQR ATLLVYLT++ DGGAT FRDLGP L+V+P+KGSALLFFP+ GG P+ PFDIRTLHAGEV
Sbjct: 202 FDKFRVLHIDPLVIAVDDFFTHEECDKYIAMSDPTAGNKDGDAV---------------MTRSMTVGKDAAAKSQRTSTTWFHHYKNVPELMAKSSRLFGLD-DIGVFEEPQTVRYQPDQKFTWHLDALAPGSENISKGGQRTATLLVYLTDLGPEDGGATTFRDLGPAEGEPLKVQPKKGSALLFFPAAGGIPNTPFDIRTLHAGEV 393
BLAST of mRNA_Ecto-sp13_S_contig18130.5592.1 vs. uniprot
Match: A0A7S1ZRX7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRX7_9STRA) HSP 1 Score: 210 bits (534), Expect = 1.400e-64 Identity = 107/208 (51.44%), Postives = 139/208 (66.83%), Query Frame = 1
Query: 73 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVAPPXXXXXXXXXXXXXXXXATGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLG-----PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 681
F R+LH +P V+ V DF T +ECD ++ + P A + + +S T+G D+ + +QRTSTTWFH + +P+LMAKAS L+G+ + RWEE QTVRYR EKFTWHLDAL P+ +LA GGQR+ATL+VYL ++PEG GG+T FRDLG PL+V P+KGSAL+FFP+ GG P+ PFDIRTLHAGE
Sbjct: 26 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKYDKN------------ANTAPMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNID-RWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEA 220
BLAST of mRNA_Ecto-sp13_S_contig18130.5592.1 vs. uniprot
Match: A0A7S2N1B0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1B0_9STRA) HSP 1 Score: 209 bits (531), Expect = 9.000e-64 Identity = 108/208 (51.92%), Postives = 137/208 (65.87%), Query Frame = 1
Query: 73 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVAPPXXXXXXXXXXXXXXXXATGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLG-----PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 681
F R+LH +P ++ + DF T ECD YIS + P A + + +S T+G D+ + +QRTSTTWFH + + LMAKAS L+G+ E RWEE QTVRYR EKFTWHLDAL P+ +L GGQR+ATLLVYL ++P+G GG+T FRDLG PL+V+P+KGSALLFFP+ GG P+ PFDIRTLHAGE
Sbjct: 57 FTKFRILHTDPMLLSIDDFLTPTECDTYISLTSNPKYDKN------------ANTAPMEIGQSKTVGKDMYSKSQRTSTTWFHHYRGMAGLMAKASRLLGLKGIE-RWEEPQTVRYRRSEKFTWHLDALAPSEELTKAGGQRVATLLVYLADLPDGCGGSTMFRDLGGESGEPLKVQPKKGSALLFFPAAGGIPNVPFDIRTLHAGEA 251
BLAST of mRNA_Ecto-sp13_S_contig18130.5592.1 vs. uniprot
Match: K0SVE6_THAOC (Fe2OG dioxygenase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVE6_THAOC) HSP 1 Score: 214 bits (544), Expect = 1.310e-63 Identity = 114/209 (54.55%), Postives = 139/209 (66.51%), Query Frame = 1
Query: 73 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVAPPXXXXXXXXXXXXXXXXATGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLA---SKGGQRIATLLVYLTEMPEGDGGATAFRDLG---PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 681
F R+LH +P VI V DFFT EECD+Y+ S+ + +S T+G D + AQRTSTTWFH ++ VPELMA+A+ L+G+P R+EE QTVRYR EKFTWHLDAL +PD+A S GQR++TLLVYLT++ +GGAT FRDLG PL+VRP+KGSALLFFPS GG PDCPFDIRTLH GE
Sbjct: 229 FEQFRVLHVDPMVIAVDDFFTSEECDKYVQMSIDAENNQDQEAGALQPLL---------LGQSQTVGKDSRSKAQRTSTTWFHHYAGVPELMARAARLLGLP-GISRFEEPQTVRYRRSEKFTWHLDAL--SPDVANDSSSAGQRVSTLLVYLTDLKSEEGGATMFRDLGGDGPLKVRPKKGSALLFFPSAGGIPDCPFDIRTLHCGEA 425
BLAST of mRNA_Ecto-sp13_S_contig18130.5592.1 vs. uniprot
Match: A0A7S4QXQ4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QXQ4_9STRA) HSP 1 Score: 210 bits (534), Expect = 2.360e-63 Identity = 107/208 (51.44%), Postives = 139/208 (66.83%), Query Frame = 1
Query: 73 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVAPPXXXXXXXXXXXXXXXXATGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLG-----PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 681
F R+LH +P V+ V DF T +ECD ++ + P A + + +S T+G D+ + +QRTSTTWFH + +P+LMAKAS L+G+ + RWEE QTVRYR EKFTWHLDAL P+ +LA GGQR+ATL+VYL ++PEG GG+T FRDLG PL+V P+KGSAL+FFP+ GG P+ PFDIRTLHAGE
Sbjct: 123 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKYDKN------------ANTAPMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNID-RWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEA 317
BLAST of mRNA_Ecto-sp13_S_contig18130.5592.1 vs. uniprot
Match: A0A7S2UAB3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAB3_9STRA) HSP 1 Score: 213 bits (541), Expect = 4.230e-63 Identity = 114/208 (54.81%), Postives = 133/208 (63.94%), Query Frame = 1
Query: 73 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVAPPXXXXXXXXXXXXXXXXATGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLG-----PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 681
F R+LH +P V+ V DFFT EECD I+RS G +S T+G D A AQRTSTTWFH ++ VPELMAKA L+G+ + +EE QTVRYR E FTWHLDAL P P+LA KGGQR ATLLVYLT++ E DGGAT FRDLG PL+VRP+KGSALLFFP+ GG P P D+RTLH GE
Sbjct: 235 FSKFRVLHVDPMVLCVDDFFTPEECDALIARSTTTVITADNNEKEGTTLLPMKIG------QSKTVGKDSRARAQRTSTTWFHHYAGVPELMAKACRLMGIN-DISAFEEPQTVRYRRTEHFTWHLDALAPTPELADKGGQRCATLLVYLTDLSEKDGGATMFRDLGGSDGEPLKVRPKKGSALLFFPAAGGIPSVPLDLRTLHCGEA 435
BLAST of mRNA_Ecto-sp13_S_contig18130.5592.1 vs. uniprot
Match: A0A7S2KB24_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KB24_9STRA) HSP 1 Score: 210 bits (535), Expect = 2.220e-62 Identity = 117/216 (54.17%), Postives = 138/216 (63.89%), Query Frame = 1
Query: 73 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVAPPXXXXXXXXXXXXXXXXATGSGPHMQ-RSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEG--RWEEAQTVRYRPGEKFTWHLDALPPAP-DLASKGGQRIATLLVYLTEMPEGDGGATAFRDLG---------PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEV 681
F R+LH +P V+ + DFFT+EECD+Y+ S+ T P + +S T+G D + AQRTSTTWFH + VPELMAKAS L+G+ EG R+EE QTVRYR EKFTWHLDAL P + S GQRIATLLVYLT++P G GGAT FRDLG PL+VRP+KGSALLFFPS GG P PFDIRTLH GE
Sbjct: 204 FEKFRVLHTDPMVLAIDDFFTNEECDKYVQISIDAEKQQTNSAAAGDETTQEETALQPMLLGQSQTVGKDSRSKAQRTSTTWFHYYKGVPELMAKASRLLGL---EGIDRFEEPQTVRYRRNEKFTWHLDALSPEEANNPSGSGQRIATLLVYLTDVPAGSGGATMFRDLGGNNGAEDSQPLKVRPKKGSALLFFPSAGGIPGAPFDIRTLHCGEA 416 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18130.5592.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18130.5592.1 >prot_Ecto-sp13_S_contig18130.5592.1 ID=prot_Ecto-sp13_S_contig18130.5592.1|Name=mRNA_Ecto-sp13_S_contig18130.5592.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=227bp AVASAVGGEKKGGGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDback to top mRNA from alignment at Ecto-sp13_S_contig18130:3..3541+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18130.5592.1 ID=mRNA_Ecto-sp13_S_contig18130.5592.1|Name=mRNA_Ecto-sp13_S_contig18130.5592.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3539bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18130:3..3541+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18130:3..3541+ >mRNA_Ecto-sp13_S_contig18130.5592.1 ID=mRNA_Ecto-sp13_S_contig18130.5592.1|Name=mRNA_Ecto-sp13_S_contig18130.5592.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=681bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18130:3..3541+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |