mRNA_Ecto-sp13_S_contig18126.5588.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18126.5588.1 vs. uniprot
Match: D8LEN9_ECTSI (Membrane acyl-CoA binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN9_ECTSI) HSP 1 Score: 484 bits (1247), Expect = 1.200e-153 Identity = 254/288 (88.19%), Postives = 259/288 (89.93%), Query Frame = 1
Query: 4 STIPRNDNDEYRARETGGDSVALSQRVLPNTGTRSQRTGSVEAIHAGMASFDWADPGPGEGSVTSDFGDNDTDGGSGAASRSPSPPRSTEHFDSSVAKLDQAATNRIYGSTQLEGCRGDFCDFDVGKRVREEENRRRFAEKAARAAGAPHGLVESLSTLRRKIISMESGDLGDGPSASATPAEVREG------ARHTDTTSERLDIPYKAVVQARQERPLVEAFLRRYARGEDGAYHKYLYGGQGDEPYLVGGKYPGVYYRPVRVCSNCHMVYTLLDEARARALRTAS 849
STIPRNDNDEYRARET GDSVALSQRVLPNTGTRSQRTGS EA+HAGMAS DWADPGPGEGS ASRSPSPPRSTEHFDSSVAKLDQAATNRIYGSTQLEGCRGDFCDFDVGKRVREEEN RRFAEKAARAAGAP+GLVESLSTLRRKI+SMESGDLGDGPSASATPAEVREG ARHTD TSERLDIPYKAVVQARQERPLVEAFLRRYARGEDGAYH+YL GGQGDEPYLVGGKYPGVYYRPV+VC NCHMVYTLLDEARARALRTAS
Sbjct: 349 STIPRNDNDEYRARETDGDSVALSQRVLPNTGTRSQRTGSREAVHAGMASSDWADPGPGEGSXXXXXXXXXXXXX--XASRSPSPPRSTEHFDSSVAKLDQAATNRIYGSTQLEGCRGDFCDFDVGKRVREEENHRRFAEKAARAAGAPNGLVESLSTLRRKILSMESGDLGDGPSASATPAEVREGGRGPRVARHTDATSERLDIPYKAVVQARQERPLVEAFLRRYARGEDGAYHRYLDGGQGDEPYLVGGKYPGVYYRPVKVCLNCHMVYTLLDEARARALRTAS 634
BLAST of mRNA_Ecto-sp13_S_contig18126.5588.1 vs. uniprot
Match: A0A6H5KVN8_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVN8_9PHAE) HSP 1 Score: 483 bits (1243), Expect = 4.120e-153 Identity = 258/306 (84.31%), Postives = 266/306 (86.93%), Query Frame = 1
Query: 4 STIPRNDNDEYRARETGGDSVALSQRVLPNTGTRSQRTGSVEAIHAGMASFDWADPGPGEGSVTSDFGDNDTDGGSGAASRSPSPPRSTEHFDSSVAKLDQAATNRIYGSTQLEGCR------------------GDFCDFDVGKRVREEENRRRFAEKAARAAGAPHGLVESLSTLRRKIISMESGDLGDGPSASATPAEVREG------ARHTDTTSERLDIPYKAVVQARQERPLVEAFLRRYARGEDGAYHKYLYGGQGDEPYLVGGKYPGVYYRPVRVCSNCHMVYTLLDEARARALRTAS 849
STIPRNDNDEYRARETGGDSVALSQRVLPNTGTRSQRTG+ A+HAGMASFDWAD PGEGS TSDFGDNDTDGGS AASRSPSPPRST +FDSSVAKLDQAATNRIYGSTQ+ C GDFCDFDVGKRVREEENRRRFAEKAARAAGA +G VE+LSTLRRKIISMESGDLGDGPSASATPAEVREG ARHTDTTSERLDI YKA+VQARQERPLVEAFLRRYARGEDGAYH+YL GGQGDEPYLVGGKYPGVYYR VRVCSNCHMVYTLLDEARARALR AS
Sbjct: 381 STIPRNDNDEYRARETGGDSVALSQRVLPNTGTRSQRTGTRAAVHAGMASFDWADLDPGEGSATSDFGDNDTDGGSRAASRSPSPPRSTVYFDSSVAKLDQAATNRIYGSTQVCHCVEAKSSGEHNTALALTSYWGDFCDFDVGKRVREEENRRRFAEKAARAAGALNGRVENLSTLRRKIISMESGDLGDGPSASATPAEVREGGRGPRVARHTDTTSERLDITYKAIVQARQERPLVEAFLRRYARGEDGAYHRYLDGGQGDEPYLVGGKYPGVYYRLVRVCSNCHMVYTLLDEARARALRAAS 686
BLAST of mRNA_Ecto-sp13_S_contig18126.5588.1 vs. uniprot
Match: A0A485LUW8_9STRA (Aste57867_24500 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LUW8_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 6.320e-18 Identity = 65/191 (34.03%), Postives = 99/191 (51.83%), Query Frame = 1
Query: 280 DSSVAKLDQAATNRIY-GSTQLEGCRGDFCDFDVGKRVREEENRRRFAEKAARAAGAPHGLVESLSTLRRKIISMESG----DLGDGPSASATPAEVREGARHTDTTSERLDIPYKAVVQARQERPLVEAFLRRYARGEDGAYHKYLYGGQGDEPYLVGGKYPGVYYRPVRVCSNCHMVYTLLDEARARAL 837
++S++KLD+ A + Y GS+Q GC GD+C V + V +++ G P G +LS+ + + M G D+ D + +T E + H IP+K + Q R E+ LV F+RRY GED Y Y G+G+ +G +PG YY+ VC+NC+ YTL+D+ARA+AL
Sbjct: 302 NASLSKLDKRAISAAYLGSSQGSGCVGDYCHTSVDRSVM-------VRQQSKSLLGFPKG-ASTLSS-KAQAYEMRLGSPVKDMSDNNNPFSTKHETKGMPTHR--------IPFKCIAQTRAEKDLVSLFVRRYLSGEDCDYLAQEYFGEGES---LGETFPGYYYQECDVCANCYAFYTLVDQARAKAL 472
BLAST of mRNA_Ecto-sp13_S_contig18126.5588.1 vs. uniprot
Match: A0A3R6Z9E6_9STRA (Isoleucine--tRNA ligase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z9E6_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.430e-15 Identity = 64/189 (33.86%), Postives = 96/189 (50.79%), Query Frame = 1
Query: 292 AKLDQAATNRIY-GSTQLEGCRGDFCDFDVGKRVREEENRRRFAEKAARAAGAPHGLVESLSTLRRKI-----ISMESGDLGDGPSASATPAEVREGARHTDTTSERLDIPYKAVVQARQERPLVEAFLRRYARGEDGAYHKYLYGGQGDEPYLVGGKYPGVYYRPVRVCSNCHMVYTLLDEARARALR 840
+K+++ A + Y GS+Q GC GD+C + E+E+R+ G P G E+LS+ +K ++ D + P S A+ A+ T IP+K + Q R E+ LV F+RRY GE Y Y G G+ ++G +PG YY+ VC+NC YTL+D+ARARAL+
Sbjct: 1479 SKMERRALSAAYLGSSQKAGCCGDYCSTVIDPSGHEKEHRQSIL-------GFPQG-SETLSSKAQKYEHRLGSPVKHNDDNNNP-LSGKHADKPVAAKPTHR------IPFKCIAQTRAEKDLVALFVRRYISGETCDYLAQEYFGDGE---VLGESFPGYYYQDCDVCANCFAFYTLIDKARARALK 1649
BLAST of mRNA_Ecto-sp13_S_contig18126.5588.1 vs. uniprot
Match: A0A6A5AYC9_9STRA (MT domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AYC9_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.750e-15 Identity = 66/191 (34.55%), Postives = 91/191 (47.64%), Query Frame = 1
Query: 289 VAKLDQAATNRIY-GSTQLEGCRGDFCDFDVGKRVREEENRRRFAEKAARAAGAPHGLVESLSTLRRKIISMESGDLGDGPSASATPAEVREGARHTDT---TSERLDIPYKAVVQARQERPLVEAFLRRYARGEDGAYHKYLYGGQGDEPYLVGGKYPGVYYRPVRVCSNCHMVYTLLDEARARALRTAS 849
++KL++ A + Y GS+Q GC GD+C + R + R G P G STL K + E LG P SA +H T T +P+K + Q R E+ LV F+RRY GE Y Y G G+ +G +PG YY+ VC+NC YTL+DEAR++AL+ S
Sbjct: 49 LSKLERRALSATYLGSSQKSGCCGDYCSTVIDPSGRMADAHRESL------LGFPKGS----STLSSKALKYEQ-RLGS-PVKSADDNNNPLSPKHDTTKVITKPTHRVPFKCIAQTRAEKDLVALFVRRYLSGESCDYLAQEYFGDGE---ALGESFPGYYYQDCDVCANCFAFYTLIDEARSKALKKLS 224
BLAST of mRNA_Ecto-sp13_S_contig18126.5588.1 vs. uniprot
Match: A0A7S2B4Q5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B4Q5_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 3.880e-15 Identity = 40/90 (44.44%), Postives = 59/90 (65.56%), Query Frame = 1
Query: 574 TDTTSERLDIPYKAVVQARQERPLVEAFLRRYARGEDGAYHKYLYGGQGD-EPYLVGGKYPGVYYRPVRVCSNCHMVYTLLDEARARALR 840
T+ + ++PY+ V+QAR+E PLV+ LRR+ RGE G Y Q D E + +G YPG YY+P++VCSNC VY L+++ R +AL+
Sbjct: 52 TEEKEKMFNLPYRCVIQARKEMPLVQLMLRRHQRGETGDYVC-----QRDMEGFSLGESYPGHYYKPIQVCSNCSQVYALIEQERMKALQ 136
BLAST of mRNA_Ecto-sp13_S_contig18126.5588.1 vs. uniprot
Match: W4GBD6_9STRA (SAM domain-containing protein n=14 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GBD6_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 4.740e-15 Identity = 67/192 (34.90%), Postives = 92/192 (47.92%), Query Frame = 1
Query: 289 VAKLDQAATNRIY-GSTQLEGCRGDFCDFDVGKRVREEENRRRFAEKAARAAGAPHGLVESLSTLRRKIISMESGDLGDGPSASATPAEVREGARHTDTTSERLD----IPYKAVVQARQERPLVEAFLRRYARGEDGAYHKYLYGGQGDEPYLVGGKYPGVYYRPVRVCSNCHMVYTLLDEARARALRTAS 849
++KL++ A + Y GS+Q GC GD+C + R + R G P G STL K + E LG P SA +H DTT +P+K + Q R E+ LV F+RRY GE Y Y G G+ +G +PG YY+ VC+NC YTL+DEAR++AL+ S
Sbjct: 320 LSKLERRALSATYLGSSQKSGCCGDYCSTVIDPSGRMADAHRESL------LGFPKGS----STLSSKALKYEQ-RLGS-PVKSADDNNNPLSPKH-DTTKVAAKPTHRVPFKCIAQTRAEKDLVALFVRRYLSGESCDYLAQEYFGDGE---ALGESFPGYYYQDCDVCANCFAFYTLIDEARSKALKKLS 495
BLAST of mRNA_Ecto-sp13_S_contig18126.5588.1 vs. uniprot
Match: A0A024TEM6_9STRA (SAM domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEM6_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 6.390e-15 Identity = 61/187 (32.62%), Postives = 90/187 (48.13%), Query Frame = 1
Query: 292 AKLDQAATNRIY-GSTQLEGCRGDFCDFDVGKRVREEENRRRFAEKAARAAGAPHG---LVESLSTLRRKIISMESGDLGDGPSASATPAEVREGARHTDTTSERLDIPYKAVVQARQERPLVEAFLRRYARGEDGAYHKYLYGGQGDEPYLVGGKYPGVYYRPVRVCSNCHMVYTLLDEARARALR 840
+K+++ A + Y GS+Q GC GD+C + E+E+R+ G P G L ++ S D + S A+ A+ T IP+K + Q R E+ LV F+RRY GE Y Y G G+ ++G +PG YY+ VC+NC YTL+D+ARARAL+
Sbjct: 321 SKMERRALSAAYLGSSQKAGCCGDYCSTVIDPSGHEKEHRQSIL-------GFPLGSGTLSSKAQKYEHRLGSPVKHDDDNNNPLSGKHADKPVAAKPTHR------IPFKCIAQTRAEKDLVALFVRRYISGETCDYLAQEYFGDGE---VLGESFPGYYYQDCDVCANCFAFYTLIDKARARALK 491
BLAST of mRNA_Ecto-sp13_S_contig18126.5588.1 vs. uniprot
Match: A0A8K1CU26_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU26_PYTOL) HSP 1 Score: 85.1 bits (209), Expect = 8.690e-15 Identity = 61/193 (31.61%), Postives = 90/193 (46.63%), Query Frame = 1
Query: 331 STQLEGCRGDFCDFDVGKRVREEENRRRFAEKAARAAGAPHGLVESLSTLRRKIISMESGDLGDGPSASATPAEVREGARHTDTTSERL------------------------DIPYKAVVQARQERPLVEAFLRRYARGEDGAYHKYLYGGQGDEPYLVGGKYPGVYYRPVRVCSNCHMVYTLLDEARARAL 837
S+Q +GC GD+CD V +R K + A +E +ST+ S+++ ++AT A + H +T +E IP+K + Q R E+ LV+ F+RRY +GEDG Y Y G G EP +G +PG YY+ V+VC NC VYTL++ R +AL
Sbjct: 369 SSQKKGCCGDYCDLVVSNWAA-----KRLESKVIPLSTASMPALEPISTVSPSNFSLKTNGGRSNAVSTATAAAQAFLSAHPETPAEIAALRKPMSPQRQQQEDRRQEGTKPHTIPFKLIAQTRAEKQLVDLFMRRYQKGEDGDYLAEEYYGDG-EP--LGETFPGYYYQEVQVCKNCFDVYTLVENVRMKAL 553
BLAST of mRNA_Ecto-sp13_S_contig18126.5588.1 vs. uniprot
Match: A0A2D4BY62_PYTIN (SAM domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BY62_PYTIN) HSP 1 Score: 77.4 bits (189), Expect = 3.320e-12 Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 1
Query: 601 IPYKAVVQARQERPLVEAFLRRYARGEDGAYHKYLYGGQGDEPYLVGGKYPGVYYRPVRVCSNCHMVYTLLDEARARAL 837
IP+K + Q R E+ LV+ FLRRY RGEDG Y Y G G EP +G +PG YY+ V+VC NC +YTL++ R +A+
Sbjct: 305 IPFKLIAQTRAEKKLVDLFLRRYQRGEDGEYLAEEYYGDG-EP--LGQTFPGYYYQDVQVCGNCFALYTLVERVRMKAI 380 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18126.5588.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18126.5588.1 >prot_Ecto-sp13_S_contig18126.5588.1 ID=prot_Ecto-sp13_S_contig18126.5588.1|Name=mRNA_Ecto-sp13_S_contig18126.5588.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=283bp NSTIPRNDNDEYRARETGGDSVALSQRVLPNTGTRSQRTGSVEAIHAGMAback to top mRNA from alignment at Ecto-sp13_S_contig18126:926..2188+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18126.5588.1 ID=mRNA_Ecto-sp13_S_contig18126.5588.1|Name=mRNA_Ecto-sp13_S_contig18126.5588.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1263bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18126:926..2188+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18126:926..2188+ >mRNA_Ecto-sp13_S_contig18126.5588.1 ID=mRNA_Ecto-sp13_S_contig18126.5588.1|Name=mRNA_Ecto-sp13_S_contig18126.5588.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=849bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18126:926..2188+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |