prot_Ecto-sp13_S_contig18126.5586.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18126.5586.1
Unique Nameprot_Ecto-sp13_S_contig18126.5586.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length84
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18126.5586.1 vs. uniprot
Match: D8LEN9_ECTSI (Membrane acyl-CoA binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN9_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 1.140e-47
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0 
Query:    1 MARRKAGEYFPITSKMLHTIVKGGVVPADFDCIYPFKGAKDFDITAEFANYQHQYILDDTGGGVSTGTTHRRVALETSGSKQGK 84
            MARRK GEYFPITSKMLHTIVKGGVVPADFDCIYPFKGAKDFDITAEFANYQHQYILDDTGGGVSTGTTHRRVALETSGSKQG+
Sbjct:  109 MARRKTGEYFPITSKMLHTIVKGGVVPADFDCIYPFKGAKDFDITAEFANYQHQYILDDTGGGVSTGTTHRRVALETSGSKQGQ 192
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BLAST of mRNA_Ecto-sp13_S_contig18126.5586.1 vs. uniprot
Match: A0A6H5KVN8_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVN8_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 4.140e-45
Identity = 78/84 (92.86%), Postives = 79/84 (94.05%), Query Frame = 0 
Query:    1 MARRKAGEYFPITSKMLHTIVKGGVVPADFDCIYPFKGAKDFDITAEFANYQHQYILDDTGGGVSTGTTHRRVALETSGSKQGK 84
            MARRK GEYFPITSKMLHTIVKGGVVPADFDCIYPFKG KDFDITAEFANYQHQYILDD GGGVSTGTTHRRV LE SGSK+GK
Sbjct:  141 MARRKTGEYFPITSKMLHTIVKGGVVPADFDCIYPFKGGKDFDITAEFANYQHQYILDDIGGGVSTGTTHRRVGLEISGSKEGK 224
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18126.5586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEN9_ECTSI1.140e-4797.62Membrane acyl-CoA binding protein n=1 Tax=Ectocarp... [more]
A0A6H5KVN8_9PHAE4.140e-4592.86SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18126contigEcto-sp13_S_contig18126:206..457 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18126.5586.1mRNA_Ecto-sp13_S_contig18126.5586.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18126 175..457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18126.5586.1 ID=prot_Ecto-sp13_S_contig18126.5586.1|Name=mRNA_Ecto-sp13_S_contig18126.5586.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp
MARRKAGEYFPITSKMLHTIVKGGVVPADFDCIYPFKGAKDFDITAEFAN
YQHQYILDDTGGGVSTGTTHRRVALETSGSKQGK
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